RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 BCL9O00512 1426 aa23.25■■□□□ 1.31
CLTA-203ENST00000396603 NEUROD1Q13562 356 aa23.24■■□□□ 1.31
CLTA-203ENST00000396603 PEAK1Q9H792 1746 aa23.24■■□□□ 1.31
CLTA-203ENST00000396603 LRRC37A3O60309 1634 aa23.23■■□□□ 1.31
CLTA-203ENST00000396603 RGPD3A6NKT7 1758 aaPredicted RBP23.23■■□□□ 1.31
CLTA-203ENST00000396603 RGPD4Q7Z3J3 1758 aa23.23■■□□□ 1.31
CLTA-203ENST00000396603 TOM1L2Q6ZVM7 507 aa23.23■■□□□ 1.31
CLTA-203ENST00000396603 DDB1Q16531 1140 aa23.22■■□□□ 1.31
CLTA-203ENST00000396603 NBPF14Q5TI25 921 aa23.22■■□□□ 1.31
CLTA-203ENST00000396603 KTN1Q86UP2 1357 aaKnown RBP23.22■■□□□ 1.31
CLTA-203ENST00000396603 NUP188Q5SRE5 1749 aa23.21■■□□□ 1.31
CLTA-203ENST00000396603 NFAT5O94916 1531 aa23.2■■□□□ 1.3
CLTA-203ENST00000396603 USP31Q70CQ4 1352 aa23.2■■□□□ 1.3
CLTA-203ENST00000396603 PLSCR1O15162 318 aa23.2■■□□□ 1.3
CLTA-203ENST00000396603 MON2Q7Z3U7 1717 aa23.19■■□□□ 1.3
CLTA-203ENST00000396603 USP54Q70EL1 1684 aa23.19■■□□□ 1.3
CLTA-203ENST00000396603 PUS7Q96PZ0 661 aaKnown RBP23.19■■□□□ 1.3
CLTA-203ENST00000396603 CARD10Q9BWT7 1032 aa23.19■■□□□ 1.3
CLTA-203ENST00000396603 AXIN2Q9Y2T1 843 aa23.19■■□□□ 1.3
CLTA-203ENST00000396603 WNK3Q9BYP7 1800 aa23.19■■□□□ 1.3
CLTA-203ENST00000396603 ZBTB7CA1YPR0 619 aa23.18■■□□□ 1.3
CLTA-203ENST00000396603 CCDC7Q96M83 1385 aa23.17■■□□□ 1.3
CLTA-203ENST00000396603 CARD11Q9BXL7 1154 aa23.17■■□□□ 1.3
CLTA-203ENST00000396603 BCL11BQ9C0K0 894 aaPredicted RBP23.15■■□□□ 1.3
CLTA-203ENST00000396603 CD163L1Q9NR16 1453 aa23.14■■□□□ 1.29
CLTA-203ENST00000396603 SLC24A1O60721 1099 aa23.13■■□□□ 1.29
CLTA-203ENST00000396603 TONSLQ96HA7 1378 aa23.13■■□□□ 1.29
CLTA-203ENST00000396603 CSB-PGBD3P0DP91 1061 aa23.12■■□□□ 1.29
CLTA-203ENST00000396603 EDC4Q6P2E9 1401 aaKnown RBP23.12■■□□□ 1.29
CLTA-203ENST00000396603 SBF2Q86WG5 1849 aa23.12■■□□□ 1.29
CLTA-203ENST00000396603 HDGFL2Q7Z4V5 671 aaPredicted RBP23.11■■□□□ 1.29
CLTA-203ENST00000396603 NINLQ9Y2I6 1382 aa23.11■■□□□ 1.29
CLTA-203ENST00000396603 MARCH10Q8NA82 808 aaPredicted RBP23.1■■□□□ 1.29
CLTA-203ENST00000396603 TNS2Q63HR2 1409 aa23.09■■□□□ 1.29
CLTA-203ENST00000396603 EXOC5O00471 708 aa23.09■■□□□ 1.29
CLTA-203ENST00000396603 TERF2IPQ9NYB0 399 aa23.09■■□□□ 1.29
CLTA-203ENST00000396603 ERBB3P21860 1342 aa23.08■■□□□ 1.29
CLTA-203ENST00000396603 SOX12O15370 315 aa23.07■■□□□ 1.28
CLTA-203ENST00000396603 RGPD5Q99666 1765 aa23.06■■□□□ 1.28
CLTA-203ENST00000396603 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.06■■□□□ 1.28
CLTA-203ENST00000396603 SPON1Q9HCB6 807 aa23.06■■□□□ 1.28
CLTA-203ENST00000396603 KCNQ2O43526 872 aa23.04■■□□□ 1.28
CLTA-203ENST00000396603 TMC1Q8TDI8 760 aa23.04■■□□□ 1.28
CLTA-203ENST00000396603 A0A1W2PP64 1363 aa23.03■■□□□ 1.28
CLTA-203ENST00000396603 NME9Q86XW9 330 aa23.03■■□□□ 1.28
CLTA-203ENST00000396603 SLC12A5Q9H2X9 1139 aa23.03■■□□□ 1.28
CLTA-203ENST00000396603 LTN1O94822 1766 aa23■■□□□ 1.27
CLTA-203ENST00000396603 IL2RBP14784 551 aa23■■□□□ 1.27
CLTA-203ENST00000396603 PROM2Q8N271 834 aa22.99■■□□□ 1.27
CLTA-203ENST00000396603 TESK2Q96S53 571 aa22.99■■□□□ 1.27
CLTA-203ENST00000396603 NHSQ6T4R5 1651 aa22.99■■□□□ 1.27
CLTA-203ENST00000396603 PTF1AQ7RTS3 328 aa22.98■■□□□ 1.27
CLTA-203ENST00000396603 ANKRD24Q8TF21 1146 aa22.98■■□□□ 1.27
CLTA-203ENST00000396603 ANO8Q9HCE9 1232 aaPredicted RBP22.98■■□□□ 1.27
CLTA-203ENST00000396603 NLRP2Q9NX02 1062 aa22.98■■□□□ 1.27
CLTA-203ENST00000396603 CASZ1Q86V15 1759 aa22.98■■□□□ 1.27
CLTA-203ENST00000396603 TXNRD1Q16881 649 aa22.97■■□□□ 1.27
CLTA-203ENST00000396603 PPP1R1BQ9UD71 204 aaPredicted RBP22.97■■□□□ 1.27
CLTA-203ENST00000396603 FAM208AQ9UK61 1670 aaKnown RBP22.97■■□□□ 1.27
CLTA-203ENST00000396603 IP6K1Q92551 441 aa22.96■■□□□ 1.27
CLTA-203ENST00000396603 ST20-MTHFSA0A0A6YYL1 179 aa22.94■■□□□ 1.26
CLTA-203ENST00000396603 STK32BQ9NY57 414 aa22.94■■□□□ 1.26
CLTA-203ENST00000396603 ANKRD36BQ8N2N9 1353 aa22.92■■□□□ 1.26
CLTA-203ENST00000396603 SLC15A2Q16348 729 aa22.92■■□□□ 1.26
CLTA-203ENST00000396603 COG3Q96JB2 828 aa22.92■■□□□ 1.26
CLTA-203ENST00000396603 PCGF6Q9BYE7 350 aa22.92■■□□□ 1.26
CLTA-203ENST00000396603 DCAF8L1A6NGE4 600 aa22.9■■□□□ 1.26
CLTA-203ENST00000396603 RTL1A6NKG5 1358 aa22.89■■□□□ 1.26
CLTA-203ENST00000396603 PAPPAQ13219 1627 aa22.87■■□□□ 1.25
CLTA-203ENST00000396603 TMF1P82094 1093 aa22.86■■□□□ 1.25
CLTA-203ENST00000396603 MTFR1LQ9H019 292 aa22.86■■□□□ 1.25
CLTA-203ENST00000396603 MAP3K19Q56UN5 1328 aa22.85■■□□□ 1.25
CLTA-203ENST00000396603 HOXC9P31274 260 aa22.85■■□□□ 1.25
CLTA-203ENST00000396603 PTGER2P43116 358 aa22.85■■□□□ 1.25
CLTA-203ENST00000396603 CDCA8Q53HL2 280 aa22.85■■□□□ 1.25
CLTA-203ENST00000396603 ACSBG1Q96GR2 724 aa22.85■■□□□ 1.25
CLTA-203ENST00000396603 BTAF1O14981 1849 aa22.83■■□□□ 1.25
CLTA-203ENST00000396603 USP47Q96K76 1375 aa22.83■■□□□ 1.25
CLTA-203ENST00000396603 CGNL1Q0VF96 1302 aa22.82■■□□□ 1.24
CLTA-203ENST00000396603 KIF24Q5T7B8 1368 aa22.82■■□□□ 1.24
CLTA-203ENST00000396603 ZBTB7AO95365 584 aa22.82■■□□□ 1.24
CLTA-203ENST00000396603 AMPHP49418 695 aa22.82■■□□□ 1.24
CLTA-203ENST00000396603 SLC27A3Q5K4L6 730 aa22.82■■□□□ 1.24
CLTA-203ENST00000396603 PDGFDQ9GZP0 370 aaPredicted RBP22.82■■□□□ 1.24
CLTA-203ENST00000396603 YY1P25490 414 aa22.81■■□□□ 1.24
CLTA-203ENST00000396603 TIMELESSQ9UNS1 1208 aa22.81■■□□□ 1.24
CLTA-203ENST00000396603 MYOM1P52179 1685 aa22.79■■□□□ 1.24
CLTA-203ENST00000396603 FYB1O15117 783 aa22.79■■□□□ 1.24
CLTA-203ENST00000396603 SGIP1Q9BQI5 828 aa22.79■■□□□ 1.24
CLTA-203ENST00000396603 SMG6Q86US8 1419 aaKnown RBP22.79■■□□□ 1.24
CLTA-203ENST00000396603 LTV1Q96GA3 475 aaPredicted RBP22.78■■□□□ 1.24
CLTA-203ENST00000396603 MAP3K5Q99683 1374 aa22.77■■□□□ 1.24
CLTA-203ENST00000396603 DDX54Q8TDD1 881 aaKnown RBP22.77■■□□□ 1.24
CLTA-203ENST00000396603 ZCRB1Q8TBF4 217 aaKnown RBP22.76■■□□□ 1.23
CLTA-203ENST00000396603 SLC16A10Q8TF71 515 aa22.76■■□□□ 1.23
CLTA-203ENST00000396603 ATF5Q9Y2D1 282 aaPredicted RBP22.76■■□□□ 1.23
CLTA-203ENST00000396603 QSER1Q2KHR3 1735 aa22.76■■□□□ 1.23
CLTA-203ENST00000396603 HMGB2P26583 209 aaKnown RBP22.75■■□□□ 1.23
CLTA-203ENST00000396603 LRRC4BQ9NT99 713 aa22.75■■□□□ 1.23
CLTA-203ENST00000396603 INSRP06213 1382 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms