RNA–Protein interactions for RNA: ENST00000396212.6

CCP110-203, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-203ENST00000396212 CT47A1Q5JQC4 288 aaPredicted RBP16.79■□□□□ 0.28
CCP110-203ENST00000396212 VPS37DQ86XT2 251 aa16.79■□□□□ 0.28
CCP110-203ENST00000396212 MAGEC2Q9UBF1 373 aaPredicted RBP16.79■□□□□ 0.28
CCP110-203ENST00000396212 UBXN4Q92575 508 aa16.79■□□□□ 0.28
CCP110-203ENST00000396212 NOL10Q9BSC4 688 aaKnown RBP16.79■□□□□ 0.28
CCP110-203ENST00000396212 MTMR7Q9Y216 660 aa16.79■□□□□ 0.28
CCP110-203ENST00000396212 USP25Q9UHP3 1055 aa16.79■□□□□ 0.28
CCP110-203ENST00000396212 SLC12A5Q9H2X9 1139 aa16.79■□□□□ 0.28
CCP110-203ENST00000396212 TMCO3Q6UWJ1 677 aa16.78■□□□□ 0.28
CCP110-203ENST00000396212 UPF3BQ9BZI7 483 aaKnown RBP16.78■□□□□ 0.28
CCP110-203ENST00000396212 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
CCP110-203ENST00000396212 XBP1P17861 261 aa16.78■□□□□ 0.28
CCP110-203ENST00000396212 ANKRD1Q15327 319 aa16.78■□□□□ 0.28
CCP110-203ENST00000396212 CWC27Q6UX04 472 aaKnown RBP16.78■□□□□ 0.28
CCP110-203ENST00000396212 CEP57L1Q8IYX8 460 aa16.78■□□□□ 0.28
CCP110-203ENST00000396212 TRIM34Q9BYJ4 488 aa16.78■□□□□ 0.28
CCP110-203ENST00000396212 CBFA2T2O43439 604 aa16.78■□□□□ 0.28
CCP110-203ENST00000396212 DHX8Q14562 1220 aaKnown RBP16.78■□□□□ 0.28
CCP110-203ENST00000396212 PTPN14Q15678 1187 aa16.78■□□□□ 0.28
CCP110-203ENST00000396212 NUTM2GQ5VZR2 741 aa16.77■□□□□ 0.28
CCP110-203ENST00000396212 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.28
CCP110-203ENST00000396212 CCDC183Q5T5S1 534 aa16.77■□□□□ 0.28
CCP110-203ENST00000396212 DEF6Q9H4E7 631 aa16.77■□□□□ 0.28
CCP110-203ENST00000396212 KIAA1107Q9UPP5 1409 aa16.77■□□□□ 0.27
CCP110-203ENST00000396212 RBM27Q9P2N5 1060 aaKnown RBP16.77■□□□□ 0.27
CCP110-203ENST00000396212 CENPHQ9H3R5 247 aa16.77■□□□□ 0.27
CCP110-203ENST00000396212 TCEAL9Q9UHQ7 104 aa16.76■□□□□ 0.27
CCP110-203ENST00000396212 SCAPERQ9BY12 1400 aa16.76■□□□□ 0.27
CCP110-203ENST00000396212 POLR3GO15318 223 aaPredicted RBP16.76■□□□□ 0.27
CCP110-203ENST00000396212 FERMT3Q86UX7 667 aa16.76■□□□□ 0.27
CCP110-203ENST00000396212 HFM1A2PYH4 1435 aa16.76■□□□□ 0.27
CCP110-203ENST00000396212 GOLGA6L10A6NI86 522 aa16.75■□□□□ 0.27
CCP110-203ENST00000396212 STAC3Q96MF2 364 aa16.75■□□□□ 0.27
CCP110-203ENST00000396212 SMARCA5O60264 1052 aaPredicted RBP16.75■□□□□ 0.27
CCP110-203ENST00000396212 CCT4P50991 539 aaKnown RBP16.75■□□□□ 0.27
CCP110-203ENST00000396212 CCDC181Q5TID7 509 aa16.75■□□□□ 0.27
CCP110-203ENST00000396212 C16orf45Q96MC5 204 aaPredicted RBP16.75■□□□□ 0.27
CCP110-203ENST00000396212 SIL1Q9H173 461 aa16.75■□□□□ 0.27
CCP110-203ENST00000396212 CASTP20810 708 aaKnown RBP16.75■□□□□ 0.27
CCP110-203ENST00000396212 PANK2Q9BZ23 570 aa16.75■□□□□ 0.27
CCP110-203ENST00000396212 PTPRGP23470 1445 aa16.75■□□□□ 0.27
CCP110-203ENST00000396212 IL1RAPL2Q9NP60 686 aa16.75■□□□□ 0.27
CCP110-203ENST00000396212 RAD54L2Q9Y4B4 1467 aa16.75■□□□□ 0.27
CCP110-203ENST00000396212 ZNHIT6Q9NWK9 470 aaKnown RBP16.74■□□□□ 0.27
CCP110-203ENST00000396212 FANCD2Q9BXW9 1451 aa16.74■□□□□ 0.27
CCP110-203ENST00000396212 XRCC6P12956 609 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCP110-203ENST00000396212 ERC1Q8IUD2 1116 aa16.74■□□□□ 0.27
CCP110-203ENST00000396212 MYO6Q9UM54 1294 aa16.74■□□□□ 0.27
CCP110-203ENST00000396212 TNNT1P13805 278 aa16.74■□□□□ 0.27
CCP110-203ENST00000396212 CCDC83Q8IWF9 413 aa16.74■□□□□ 0.27
CCP110-203ENST00000396212 JMYQ8N9B5 988 aa16.74■□□□□ 0.27
CCP110-203ENST00000396212 ZSCAN31Q96LW9 406 aaPredicted RBP16.74■□□□□ 0.27
CCP110-203ENST00000396212 BLOC1S2Q6QNY1 142 aa16.74■□□□□ 0.27
CCP110-203ENST00000396212 CLCN1P35523 988 aa16.73■□□□□ 0.27
CCP110-203ENST00000396212 DACH1Q9UI36 760 aa16.73■□□□□ 0.27
CCP110-203ENST00000396212 TRHP20396 242 aaPredicted RBP16.73■□□□□ 0.27
CCP110-203ENST00000396212 CLIP2Q9UDT6 1046 aa16.73■□□□□ 0.27
CCP110-203ENST00000396212 CFAP45Q9UL16 551 aa16.73■□□□□ 0.27
CCP110-203ENST00000396212 ZFYVE27Q5T4F4 411 aa16.72■□□□□ 0.27
CCP110-203ENST00000396212 DDX11Q96FC9 970 aa16.72■□□□□ 0.27
CCP110-203ENST00000396212 TRMT1Q9NXH9 659 aaKnown RBP16.72■□□□□ 0.27
CCP110-203ENST00000396212 PPP6R1Q9UPN7 881 aa16.72■□□□□ 0.27
CCP110-203ENST00000396212 DYNC1I1O14576 645 aa16.72■□□□□ 0.27
CCP110-203ENST00000396212 RARSP54136 660 aaKnown RBP16.72■□□□□ 0.27
CCP110-203ENST00000396212 GDPD2Q9HCC8 539 aa16.72■□□□□ 0.27
CCP110-203ENST00000396212 NUTM1Q86Y26 1132 aa16.72■□□□□ 0.27
CCP110-203ENST00000396212 ADCY5O95622 1261 aa16.72■□□□□ 0.27
CCP110-203ENST00000396212 SART3Q15020 963 aaKnown RBP16.72■□□□□ 0.27
CCP110-203ENST00000396212 GTF2F1P35269 517 aaKnown RBP eCLIP16.71■□□□□ 0.27
CCP110-203ENST00000396212 ODF2Q5BJF6 829 aa16.71■□□□□ 0.27
CCP110-203ENST00000396212 IBSPP21815 317 aaPredicted RBP16.71■□□□□ 0.27
CCP110-203ENST00000396212 KIF18AQ8NI77 898 aa16.71■□□□□ 0.27
CCP110-203ENST00000396212 SRCIN1Q9C0H9 1055 aa16.71■□□□□ 0.27
CCP110-203ENST00000396212 CALCOCO1Q9P1Z2 691 aa16.71■□□□□ 0.27
CCP110-203ENST00000396212 IGHDP01880 384 aa16.71■□□□□ 0.27
CCP110-203ENST00000396212 USP8P40818 1118 aa16.71■□□□□ 0.27
CCP110-203ENST00000396212 PIP4K2AP48426 406 aaPredicted RBP16.71■□□□□ 0.27
CCP110-203ENST00000396212 NKTRP30414 1462 aaKnown RBP16.71■□□□□ 0.27
CCP110-203ENST00000396212 TMX1Q9H3N1 280 aa16.71■□□□□ 0.27
CCP110-203ENST00000396212 CFAP100Q494V2 611 aa16.71■□□□□ 0.26
CCP110-203ENST00000396212 URI1O94763 535 aaPredicted RBP16.7■□□□□ 0.26
CCP110-203ENST00000396212 ZSCAN23Q3MJ62 389 aa16.7■□□□□ 0.26
CCP110-203ENST00000396212 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
CCP110-203ENST00000396212 SMTNL1A8MU46 457 aa16.7■□□□□ 0.26
CCP110-203ENST00000396212 BAG4O95429 457 aaKnown RBP16.7■□□□□ 0.26
CCP110-203ENST00000396212 AACSQ86V21 672 aa16.7■□□□□ 0.26
CCP110-203ENST00000396212 LRRFIP2Q9Y608 721 aaKnown RBP16.7■□□□□ 0.26
CCP110-203ENST00000396212 TXLNAP40222 546 aa16.7■□□□□ 0.26
CCP110-203ENST00000396212 CKAP2LQ8IYA6 745 aa16.7■□□□□ 0.26
CCP110-203ENST00000396212 GAS2L2Q8NHY3 880 aa16.69■□□□□ 0.26
CCP110-203ENST00000396212 PSME1Q06323 249 aa16.69■□□□□ 0.26
CCP110-203ENST00000396212 ZNF830Q96NB3 372 aaPredicted RBP16.69■□□□□ 0.26
CCP110-203ENST00000396212 EXOC6BQ9Y2D4 811 aa16.69■□□□□ 0.26
CCP110-203ENST00000396212 SFPQP23246 707 aaKnown RBP eCLIP16.69■□□□□ 0.26
CCP110-203ENST00000396212 EVA1CP58658 441 aa16.69■□□□□ 0.26
CCP110-203ENST00000396212 SULT6B1Q6IMI4 303 aa16.69■□□□□ 0.26
CCP110-203ENST00000396212 TBC1D32Q96NH3 1257 aa16.69■□□□□ 0.26
CCP110-203ENST00000396212 CASQ1P31415 396 aa16.68■□□□□ 0.26
CCP110-203ENST00000396212 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
CCP110-203ENST00000396212 DDX54Q8TDD1 881 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms