RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 PHRF1Q9P1Y6 1649 aaKnown RBP18.12■□□□□ 0.49
VAPB-202ENST00000395802 ZBED9Q6R2W3 1325 aa18.12■□□□□ 0.49
VAPB-202ENST00000395802 RUNDC1Q96C34 613 aa18.12■□□□□ 0.49
VAPB-202ENST00000395802 EIF4A2Q14240 407 aaKnown RBP18.11■□□□□ 0.49
VAPB-202ENST00000395802 CPDO75976 1380 aa18.11■□□□□ 0.49
VAPB-202ENST00000395802 LTN1O94822 1766 aa18.11■□□□□ 0.49
VAPB-202ENST00000395802 PLEKHG5O94827 1062 aa18.1■□□□□ 0.49
VAPB-202ENST00000395802 ABCC6O95255 1503 aa18.1■□□□□ 0.49
VAPB-202ENST00000395802 PEAK1Q9H792 1746 aa18.09■□□□□ 0.49
VAPB-202ENST00000395802 MAPK8IP3Q9UPT6 1336 aa18.09■□□□□ 0.49
VAPB-202ENST00000395802 PHLPP1O60346 1717 aa18.09■□□□□ 0.49
VAPB-202ENST00000395802 ZBTB7CA1YPR0 619 aa18.09■□□□□ 0.49
VAPB-202ENST00000395802 ZC3H6P61129 1189 aaKnown RBP18.09■□□□□ 0.49
VAPB-202ENST00000395802 CABLES1Q8TDN4 633 aa18.08■□□□□ 0.48
VAPB-202ENST00000395802 NCBP3Q53F19 620 aaKnown RBP18.07■□□□□ 0.48
VAPB-202ENST00000395802 CRYBG1Q9Y4K1 1723 aa18.06■□□□□ 0.48
VAPB-202ENST00000395802 CCDC146Q8IYE0 955 aa18.05■□□□□ 0.48
VAPB-202ENST00000395802 PRDM11Q9NQV5 511 aa18.05■□□□□ 0.48
VAPB-202ENST00000395802 COL16A1Q07092 1604 aaPredicted RBP18.05■□□□□ 0.48
VAPB-202ENST00000395802 COL22A1Q8NFW1 1626 aaPredicted RBP18.05■□□□□ 0.48
VAPB-202ENST00000395802 KIAA0232Q92628 1395 aa18.04■□□□□ 0.48
VAPB-202ENST00000395802 RSPH6AQ9H0K4 717 aa18.04■□□□□ 0.48
VAPB-202ENST00000395802 APAF1O14727 1248 aa18.03■□□□□ 0.48
VAPB-202ENST00000395802 SULT6B1Q6IMI4 303 aa18.03■□□□□ 0.48
VAPB-202ENST00000395802 PLEKHF1Q96S99 279 aa18.03■□□□□ 0.48
VAPB-202ENST00000395802 IGSF1Q8N6C5 1336 aa18.03■□□□□ 0.48
VAPB-202ENST00000395802 HMOX1P09601 288 aa18.02■□□□□ 0.48
VAPB-202ENST00000395802 PDE3BQ13370 1112 aa18.02■□□□□ 0.48
VAPB-202ENST00000395802 LTV1Q96GA3 475 aaPredicted RBP18.02■□□□□ 0.48
VAPB-202ENST00000395802 PRKAR2BP31323 418 aa18.02■□□□□ 0.47
VAPB-202ENST00000395802 TCP11L2Q8N4U5 519 aa18.02■□□□□ 0.47
VAPB-202ENST00000395802 ANKRD24Q8TF21 1146 aa18.02■□□□□ 0.47
VAPB-202ENST00000395802 EYA1Q99502 592 aa18.02■□□□□ 0.47
VAPB-202ENST00000395802 KDRP35968 1356 aa18.01■□□□□ 0.47
VAPB-202ENST00000395802 ERBB3P21860 1342 aa18■□□□□ 0.47
VAPB-202ENST00000395802 JCADQ9P266 1359 aa18■□□□□ 0.47
VAPB-202ENST00000395802 RGPD1P0DJD0 1748 aa18■□□□□ 0.47
VAPB-202ENST00000395802 ABCA3Q99758 1704 aa18■□□□□ 0.47
VAPB-202ENST00000395802 AXIN2Q9Y2T1 843 aa18■□□□□ 0.47
VAPB-202ENST00000395802 CCDC27Q2M243 656 aa17.99■□□□□ 0.47
VAPB-202ENST00000395802 CSB-PGBD3P0DP91 1061 aa17.98■□□□□ 0.47
VAPB-202ENST00000395802 CHRNA2Q15822 529 aa17.98■□□□□ 0.47
VAPB-202ENST00000395802 SALL2Q9Y467 1007 aaPredicted RBP17.98■□□□□ 0.47
VAPB-202ENST00000395802 LMOD3Q0VAK6 560 aa17.97■□□□□ 0.47
VAPB-202ENST00000395802 TMPOP42166 694 aaKnown RBP17.96■□□□□ 0.47
VAPB-202ENST00000395802 COL18A1P39060 1754 aa17.96■□□□□ 0.47
VAPB-202ENST00000395802 FAM208AQ9UK61 1670 aaKnown RBP17.96■□□□□ 0.47
VAPB-202ENST00000395802 NBPF6Q5VWK0 638 aa17.95■□□□□ 0.46
VAPB-202ENST00000395802 AEBP1Q8IUX7 1158 aa17.95■□□□□ 0.46
VAPB-202ENST00000395802 NBPF4Q96M43 638 aa17.95■□□□□ 0.46
VAPB-202ENST00000395802 SPATA31A6Q5VVP1 1343 aa17.95■□□□□ 0.46
VAPB-202ENST00000395802 EVA1CP58658 441 aa17.95■□□□□ 0.46
VAPB-202ENST00000395802 NEUROD2Q15784 382 aa17.95■□□□□ 0.46
VAPB-202ENST00000395802 NFE2L2Q16236 605 aa17.95■□□□□ 0.46
VAPB-202ENST00000395802 GTF3C3Q9Y5Q9 886 aa17.95■□□□□ 0.46
VAPB-202ENST00000395802 FAM83GA6ND36 823 aa17.94■□□□□ 0.46
VAPB-202ENST00000395802 RIPK4P57078 832 aa17.94■□□□□ 0.46
VAPB-202ENST00000395802 GAS2L2Q8NHY3 880 aa17.94■□□□□ 0.46
VAPB-202ENST00000395802 PLEKHG2Q9H7P9 1386 aa17.94■□□□□ 0.46
VAPB-202ENST00000395802 WDR17Q8IZU2 1322 aa17.94■□□□□ 0.46
VAPB-202ENST00000395802 GOLGA2Q08379 1002 aa17.93■□□□□ 0.46
VAPB-202ENST00000395802 NLRP2Q9NX02 1062 aa17.93■□□□□ 0.46
VAPB-202ENST00000395802 COL14A1Q05707 1796 aaKnown RBP17.93■□□□□ 0.46
VAPB-202ENST00000395802 CALD1Q05682 793 aaKnown RBP17.93■□□□□ 0.46
VAPB-202ENST00000395802 WDR63Q8IWG1 891 aa17.93■□□□□ 0.46
VAPB-202ENST00000395802 WWC1Q8IX03 1113 aa17.93■□□□□ 0.46
VAPB-202ENST00000395802 LMO7Q8WWI1 1683 aa17.93■□□□□ 0.46
VAPB-202ENST00000395802 NCAPD2Q15021 1401 aa17.92■□□□□ 0.46
VAPB-202ENST00000395802 AMOTQ4VCS5 1084 aa17.92■□□□□ 0.46
VAPB-202ENST00000395802 PHACTR3Q96KR7 559 aa17.92■□□□□ 0.46
VAPB-202ENST00000395802 COL5A2P05997 1499 aaPredicted RBP17.92■□□□□ 0.46
VAPB-202ENST00000395802 ZNF521Q96K83 1311 aa17.92■□□□□ 0.46
VAPB-202ENST00000395802 PHF23Q9BUL5 403 aaPredicted RBP17.91■□□□□ 0.46
VAPB-202ENST00000395802 RRP7AQ9Y3A4 280 aaKnown RBP17.91■□□□□ 0.46
VAPB-202ENST00000395802 RGPD5Q99666 1765 aa17.91■□□□□ 0.46
VAPB-202ENST00000395802 SENP3-EIF4A1A0A087X0R7 540 aa17.91■□□□□ 0.46
VAPB-202ENST00000395802 TOM1L2Q6ZVM7 507 aa17.91■□□□□ 0.46
VAPB-202ENST00000395802 RAPGEF4Q8WZA2 1011 aa17.91■□□□□ 0.46
VAPB-202ENST00000395802 BTG4Q9NY30 223 aa17.91■□□□□ 0.46
VAPB-202ENST00000395802 CAMTA1Q9Y6Y1 1673 aa17.91■□□□□ 0.46
VAPB-202ENST00000395802 HSPA1LP34931 641 aa17.9■□□□□ 0.46
VAPB-202ENST00000395802 NUTM2BA6NNL0 878 aaPredicted RBP17.89■□□□□ 0.45
VAPB-202ENST00000395802 NUTM2EB1AL46 878 aaPredicted RBP17.89■□□□□ 0.45
VAPB-202ENST00000395802 E9PSI1 815 aa17.89■□□□□ 0.45
VAPB-202ENST00000395802 ADAMTS2O95450 1211 aa17.89■□□□□ 0.45
VAPB-202ENST00000395802 PLEKHO1Q53GL0 409 aaPredicted RBP17.89■□□□□ 0.45
VAPB-202ENST00000395802 NUTM2AQ8IVF1 878 aaPredicted RBP17.89■□□□□ 0.45
VAPB-202ENST00000395802 USHBP1Q8N6Y0 703 aa17.89■□□□□ 0.45
VAPB-202ENST00000395802 CARD10Q9BWT7 1032 aa17.88■□□□□ 0.45
VAPB-202ENST00000395802 HTATSF1O43719 755 aaKnown RBP17.88■□□□□ 0.45
VAPB-202ENST00000395802 RTF1Q92541 710 aaKnown RBP17.88■□□□□ 0.45
VAPB-202ENST00000395802 STRN4Q9NRL3 753 aa17.88■□□□□ 0.45
VAPB-202ENST00000395802 TATP17735 454 aaPredicted RBP17.87■□□□□ 0.45
VAPB-202ENST00000395802 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.86■□□□□ 0.452e-8■□□□□ 10.4
VAPB-202ENST00000395802 TRIM35Q9UPQ4 493 aa17.86■□□□□ 0.45
VAPB-202ENST00000395802 IL16Q14005 1332 aa17.86■□□□□ 0.45
VAPB-202ENST00000395802 CRB1P82279 1406 aa17.86■□□□□ 0.45
VAPB-202ENST00000395802 MTHFSDQ2M296 383 aaKnown RBP17.86■□□□□ 0.45
VAPB-202ENST00000395802 MYH16Q9H6N6 1097 aa17.86■□□□□ 0.45
VAPB-202ENST00000395802 GNAT3A8MTJ3 354 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms