RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 KCNH5Q8NCM2 988 aa25.57■■□□□ 1.68
CXCL12-204ENST00000395793 TESK2Q96S53 571 aa25.57■■□□□ 1.68
CXCL12-204ENST00000395793 SLC12A5Q9H2X9 1139 aa25.57■■□□□ 1.68
CXCL12-204ENST00000395793 USP31Q70CQ4 1352 aa25.56■■□□□ 1.68
CXCL12-204ENST00000395793 RREB1Q92766 1687 aa25.56■■□□□ 1.68
CXCL12-204ENST00000395793 NME9Q86XW9 330 aa25.56■■□□□ 1.68
CXCL12-204ENST00000395793 WDR17Q8IZU2 1322 aa25.56■■□□□ 1.68
CXCL12-204ENST00000395793 LTN1O94822 1766 aa25.56■■□□□ 1.68
CXCL12-204ENST00000395793 EZH2Q15910 746 aaKnown RBP25.55■■□□□ 1.68
CXCL12-204ENST00000395793 TMC1Q8TDI8 760 aa25.55■■□□□ 1.68
CXCL12-204ENST00000395793 A0A1W2PP64 1363 aa25.55■■□□□ 1.68
CXCL12-204ENST00000395793 SBF2Q86WG5 1849 aa25.54■■□□□ 1.68
CXCL12-204ENST00000395793 ABCC6O95255 1503 aa25.54■■□□□ 1.68
CXCL12-204ENST00000395793 PSDA5PKW4 1024 aaPredicted RBP25.54■■□□□ 1.68
CXCL12-204ENST00000395793 LRP5O75197 1615 aa25.53■■□□□ 1.68
CXCL12-204ENST00000395793 ST20-MTHFSA0A0A6YYL1 179 aa25.53■■□□□ 1.68
CXCL12-204ENST00000395793 TOM1L2Q6ZVM7 507 aa25.53■■□□□ 1.68
CXCL12-204ENST00000395793 EDC4Q6P2E9 1401 aaKnown RBP25.53■■□□□ 1.68
CXCL12-204ENST00000395793 CAMKK2Q96RR4 588 aa25.52■■□□□ 1.68
CXCL12-204ENST00000395793 NUP188Q5SRE5 1749 aa25.51■■□□□ 1.68
CXCL12-204ENST00000395793 HDGFL2Q7Z4V5 671 aaPredicted RBP25.5■■□□□ 1.67
CXCL12-204ENST00000395793 PUS7Q96PZ0 661 aaKnown RBP25.5■■□□□ 1.67
CXCL12-204ENST00000395793 OVOS2A0A0J9YW53 1432 aa25.49■■□□□ 1.67
CXCL12-204ENST00000395793 OVOS2Q6IE36 1432 aa25.49■■□□□ 1.67
CXCL12-204ENST00000395793 APBA3O96018 575 aa25.49■■□□□ 1.67
CXCL12-204ENST00000395793 OVOS2A0A0G2JMS6 1433 aa25.48■■□□□ 1.67
CXCL12-204ENST00000395793 CARD10Q9BWT7 1032 aa25.46■■□□□ 1.67
CXCL12-204ENST00000395793 TERF2IPQ9NYB0 399 aa25.46■■□□□ 1.67
CXCL12-204ENST00000395793 CSB-PGBD3P0DP91 1061 aa25.45■■□□□ 1.66
CXCL12-204ENST00000395793 DDB1Q16531 1140 aa25.45■■□□□ 1.66
CXCL12-204ENST00000395793 PARD3Q8TEW0 1356 aa25.44■■□□□ 1.66
CXCL12-204ENST00000395793 USP47Q96K76 1375 aa25.44■■□□□ 1.66
CXCL12-204ENST00000395793 R3HDM1Q15032 1099 aaKnown RBP25.44■■□□□ 1.66
CXCL12-204ENST00000395793 NINLQ9Y2I6 1382 aa25.43■■□□□ 1.66
CXCL12-204ENST00000395793 RGPD3A6NKT7 1758 aaPredicted RBP25.42■■□□□ 1.66
CXCL12-204ENST00000395793 RGPD4Q7Z3J3 1758 aa25.42■■□□□ 1.66
CXCL12-204ENST00000395793 MARCH10Q8NA82 808 aaPredicted RBP25.42■■□□□ 1.66
CXCL12-204ENST00000395793 ERBB3P21860 1342 aa25.41■■□□□ 1.66
CXCL12-204ENST00000395793 CCDC7Q96M83 1385 aa25.41■■□□□ 1.66
CXCL12-204ENST00000395793 PTF1AQ7RTS3 328 aa25.4■■□□□ 1.66
CXCL12-204ENST00000395793 CDCA7Q9BWT1 371 aaPredicted RBP25.39■■□□□ 1.66
CXCL12-204ENST00000395793 TNS2Q63HR2 1409 aa25.38■■□□□ 1.65
CXCL12-204ENST00000395793 BCL9O00512 1426 aa25.37■■□□□ 1.65
CXCL12-204ENST00000395793 ANKRD36BQ8N2N9 1353 aa25.37■■□□□ 1.65
CXCL12-204ENST00000395793 C11orf95C9JLR9 678 aaPredicted RBP25.37■■□□□ 1.65
CXCL12-204ENST00000395793 MYOM1P52179 1685 aa25.36■■□□□ 1.65
CXCL12-204ENST00000395793 FAM208AQ9UK61 1670 aaKnown RBP25.34■■□□□ 1.65
CXCL12-204ENST00000395793 ANKRD24Q8TF21 1146 aa25.34■■□□□ 1.65
CXCL12-204ENST00000395793 NLRP2Q9NX02 1062 aa25.33■■□□□ 1.65
CXCL12-204ENST00000395793 RGPD2P0DJD1 1756 aa25.33■■□□□ 1.65
CXCL12-204ENST00000395793 SLC24A1O60721 1099 aa25.32■■□□□ 1.64
CXCL12-204ENST00000395793 FBLN1P23142 703 aa25.32■■□□□ 1.64
CXCL12-204ENST00000395793 TMF1P82094 1093 aa25.32■■□□□ 1.64
CXCL12-204ENST00000395793 BCL11BQ9C0K0 894 aaPredicted RBP25.32■■□□□ 1.64
CXCL12-204ENST00000395793 NHSQ6T4R5 1651 aa25.32■■□□□ 1.64
CXCL12-204ENST00000395793 KIF20BQ96Q89 1820 aa25.31■■□□□ 1.64
CXCL12-204ENST00000395793 EXOC5O00471 708 aa25.31■■□□□ 1.64
CXCL12-204ENST00000395793 IP6K1Q92551 441 aa25.3■■□□□ 1.64
CXCL12-204ENST00000395793 PCGF6Q9BYE7 350 aa25.3■■□□□ 1.64
CXCL12-204ENST00000395793 COG3Q96JB2 828 aa25.29■■□□□ 1.64
CXCL12-204ENST00000395793 MAP3K19Q56UN5 1328 aa25.29■■□□□ 1.64
CXCL12-204ENST00000395793 PLSCR1O15162 318 aa25.28■■□□□ 1.64
CXCL12-204ENST00000395793 CLSPNQ9HAW4 1339 aa25.28■■□□□ 1.64
CXCL12-204ENST00000395793 IL2RBP14784 551 aa25.26■■□□□ 1.63
CXCL12-204ENST00000395793 TIMELESSQ9UNS1 1208 aa25.26■■□□□ 1.63
CXCL12-204ENST00000395793 FYB1O15117 783 aa25.25■■□□□ 1.63
CXCL12-204ENST00000395793 NBPF14Q5TI25 921 aa25.25■■□□□ 1.63
CXCL12-204ENST00000395793 PROM2Q8N271 834 aa25.25■■□□□ 1.63
CXCL12-204ENST00000395793 LTV1Q96GA3 475 aaPredicted RBP25.25■■□□□ 1.63
CXCL12-204ENST00000395793 ANO8Q9HCE9 1232 aaPredicted RBP25.25■■□□□ 1.63
CXCL12-204ENST00000395793 KCNQ2O43526 872 aa25.24■■□□□ 1.63
CXCL12-204ENST00000395793 HOXC9P31274 260 aa25.24■■□□□ 1.63
CXCL12-204ENST00000395793 GGNBP2Q9H3C7 697 aa25.24■■□□□ 1.63
CXCL12-204ENST00000395793 BTAF1O14981 1849 aa25.23■■□□□ 1.63
CXCL12-204ENST00000395793 CASZ1Q86V15 1759 aa25.23■■□□□ 1.63
CXCL12-204ENST00000395793 SHANK3Q9BYB0 1731 aa25.23■■□□□ 1.63
CXCL12-204ENST00000395793 RRS1Q15050 365 aaKnown RBP25.21■■□□□ 1.63
CXCL12-204ENST00000395793 ACSBG1Q96GR2 724 aa25.2■■□□□ 1.62
CXCL12-204ENST00000395793 RTL1A6NKG5 1358 aa25.19■■□□□ 1.62
CXCL12-204ENST00000395793 AMPHP49418 695 aa25.19■■□□□ 1.62
CXCL12-204ENST00000395793 CARD14Q9BXL6 1004 aa25.19■■□□□ 1.62
CXCL12-204ENST00000395793 KAT6BQ8WYB5 2073 aa25.18■■□□□ 1.62
CXCL12-204ENST00000395793 CDCA8Q53HL2 280 aa25.18■■□□□ 1.62
CXCL12-204ENST00000395793 MEGF6O75095 1541 aa25.17■■□□□ 1.62
CXCL12-204ENST00000395793 TXNRD1Q16881 649 aa25.17■■□□□ 1.62
CXCL12-204ENST00000395793 NSD3Q9BZ95 1437 aa25.17■■□□□ 1.62
CXCL12-204ENST00000395793 PAPPAQ13219 1627 aa25.15■■□□□ 1.62
CXCL12-204ENST00000395793 DOT1LQ8TEK3 1739 aa25.15■■□□□ 1.62
CXCL12-204ENST00000395793 PDGFDQ9GZP0 370 aaPredicted RBP25.14■■□□□ 1.62
CXCL12-204ENST00000395793 ANKRD26Q9UPS8 1709 aa25.13■■□□□ 1.61
CXCL12-204ENST00000395793 NBPF6Q5VWK0 638 aa25.11■■□□□ 1.61
CXCL12-204ENST00000395793 DDX54Q8TDD1 881 aaKnown RBP25.11■■□□□ 1.61
CXCL12-204ENST00000395793 NBPF4Q96M43 638 aa25.11■■□□□ 1.61
CXCL12-204ENST00000395793 USHBP1Q8N6Y0 703 aa25.1■■□□□ 1.61
CXCL12-204ENST00000395793 HSP90AB2PQ58FF8 381 aa25.09■■□□□ 1.61
CXCL12-204ENST00000395793 SPON1Q9HCB6 807 aa25.09■■□□□ 1.61
CXCL12-204ENST00000395793 INSRP06213 1382 aa25.08■■□□□ 1.61
CXCL12-204ENST00000395793 FLT4P35916 1363 aa25.07■■□□□ 1.6
CXCL12-204ENST00000395793 MAP2P11137 1827 aaKnown RBP25.07■■□□□ 1.6
CXCL12-204ENST00000395793 SMG6Q86US8 1419 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms