RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 NINLQ9Y2I6 1382 aa12.35□□□□□ -0.43
PTPN20-205ENST00000395721 TOM1L2Q6ZVM7 507 aa12.35□□□□□ -0.43
PTPN20-205ENST00000395721 RGPD1P0DJD0 1748 aa12.35□□□□□ -0.43
PTPN20-205ENST00000395721 USP31Q70CQ4 1352 aa12.35□□□□□ -0.43
PTPN20-205ENST00000395721 CSB-PGBD3P0DP91 1061 aa12.35□□□□□ -0.43
PTPN20-205ENST00000395721 FAM196AQ6ZSG2 479 aa12.35□□□□□ -0.43
PTPN20-205ENST00000395721 CD163L1Q9NR16 1453 aa12.34□□□□□ -0.43
PTPN20-205ENST00000395721 ARHGEF25Q86VW2 580 aa12.34□□□□□ -0.43
PTPN20-205ENST00000395721 NME9Q86XW9 330 aa12.34□□□□□ -0.43
PTPN20-205ENST00000395721 TESK2Q96S53 571 aa12.34□□□□□ -0.43
PTPN20-205ENST00000395721 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
PTPN20-205ENST00000395721 NFAT5O94916 1531 aa12.33□□□□□ -0.43
PTPN20-205ENST00000395721 A0A1W2PP64 1363 aa12.33□□□□□ -0.43
PTPN20-205ENST00000395721 TMF1P82094 1093 aa12.33□□□□□ -0.44
PTPN20-205ENST00000395721 WDR17Q8IZU2 1322 aa12.33□□□□□ -0.44
PTPN20-205ENST00000395721 COL18A1P39060 1754 aa12.32□□□□□ -0.44
PTPN20-205ENST00000395721 ABCC6O95255 1503 aa12.32□□□□□ -0.44
PTPN20-205ENST00000395721 USP54Q70EL1 1684 aa12.31□□□□□ -0.44
PTPN20-205ENST00000395721 TRIM37O94972 964 aa12.3□□□□□ -0.44
PTPN20-205ENST00000395721 CDCA8Q53HL2 280 aa12.3□□□□□ -0.44
PTPN20-205ENST00000395721 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
PTPN20-205ENST00000395721 PARP4Q9UKK3 1724 aaKnown RBP12.3□□□□□ -0.44
PTPN20-205ENST00000395721 EN1Q05925 392 aaPredicted RBP12.3□□□□□ -0.44
PTPN20-205ENST00000395721 CDCA7Q9BWT1 371 aaPredicted RBP12.3□□□□□ -0.44
PTPN20-205ENST00000395721 DISP2A7MBM2 1401 aa12.3□□□□□ -0.44
PTPN20-205ENST00000395721 C11orf95C9JLR9 678 aaPredicted RBP12.3□□□□□ -0.44
PTPN20-205ENST00000395721 CARD10Q9BWT7 1032 aa12.3□□□□□ -0.44
PTPN20-205ENST00000395721 TNS1Q9HBL0 1735 aaKnown RBP12.29□□□□□ -0.44
PTPN20-205ENST00000395721 DDB1Q16531 1140 aa12.29□□□□□ -0.44
PTPN20-205ENST00000395721 OVOS2A0A0J9YW53 1432 aa12.29□□□□□ -0.44
PTPN20-205ENST00000395721 OVOS2Q6IE36 1432 aa12.29□□□□□ -0.44
PTPN20-205ENST00000395721 CCDC7Q96M83 1385 aa12.29□□□□□ -0.44
PTPN20-205ENST00000395721 CCER1Q8TC90 406 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-205ENST00000395721 ANKRD36BQ8N2N9 1353 aa12.28□□□□□ -0.44
PTPN20-205ENST00000395721 COG3Q96JB2 828 aa12.28□□□□□ -0.44
PTPN20-205ENST00000395721 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
PTPN20-205ENST00000395721 APBA3O96018 575 aa12.28□□□□□ -0.44
PTPN20-205ENST00000395721 LRRC37A3O60309 1634 aa12.28□□□□□ -0.44
PTPN20-205ENST00000395721 RGPD5Q99666 1765 aa12.27□□□□□ -0.44
PTPN20-205ENST00000395721 WNK3Q9BYP7 1800 aa12.27□□□□□ -0.44
PTPN20-205ENST00000395721 PARD3Q8TEW0 1356 aa12.27□□□□□ -0.45
PTPN20-205ENST00000395721 NLRP2Q9NX02 1062 aa12.26□□□□□ -0.45
PTPN20-205ENST00000395721 LTN1O94822 1766 aa12.26□□□□□ -0.45
PTPN20-205ENST00000395721 EZH2Q15910 746 aaKnown RBP12.25□□□□□ -0.45
PTPN20-205ENST00000395721 ANKRD24Q8TF21 1146 aa12.25□□□□□ -0.45
PTPN20-205ENST00000395721 ERBB3P21860 1342 aa12.25□□□□□ -0.45
PTPN20-205ENST00000395721 PSDA5PKW4 1024 aaPredicted RBP12.24□□□□□ -0.45
PTPN20-205ENST00000395721 ANP32EQ9BTT0 268 aa12.24□□□□□ -0.45
PTPN20-205ENST00000395721 EXOC5O00471 708 aa12.24□□□□□ -0.45
PTPN20-205ENST00000395721 CAMKK2Q96RR4 588 aa12.24□□□□□ -0.45
PTPN20-205ENST00000395721 PRKCSHP14314 528 aaPredicted RBP12.23□□□□□ -0.45
PTPN20-205ENST00000395721 IP6K1Q92551 441 aa12.23□□□□□ -0.45
PTPN20-205ENST00000395721 TNS2Q63HR2 1409 aa12.23□□□□□ -0.45
PTPN20-205ENST00000395721 AMPHP49418 695 aa12.23□□□□□ -0.45
PTPN20-205ENST00000395721 PEAK1Q9H792 1746 aa12.22□□□□□ -0.45
PTPN20-205ENST00000395721 LTV1Q96GA3 475 aaPredicted RBP12.22□□□□□ -0.45
PTPN20-205ENST00000395721 EP400Q96L91 3159 aa12.22□□□□□ -0.45
PTPN20-205ENST00000395721 MARCH10Q8NA82 808 aaPredicted RBP12.22□□□□□ -0.45
PTPN20-205ENST00000395721 IL2RBP14784 551 aa12.21□□□□□ -0.45
PTPN20-205ENST00000395721 R3HDM1Q15032 1099 aaKnown RBP12.21□□□□□ -0.45
PTPN20-205ENST00000395721 POLR3GLQ9BT43 218 aa12.21□□□□□ -0.45
PTPN20-205ENST00000395721 GGNBP2Q9H3C7 697 aa12.21□□□□□ -0.45
PTPN20-205ENST00000395721 MAP3K19Q56UN5 1328 aa12.21□□□□□ -0.45
PTPN20-205ENST00000395721 NBPF14Q5TI25 921 aa12.21□□□□□ -0.46
PTPN20-205ENST00000395721 RTL1A6NKG5 1358 aa12.2□□□□□ -0.46
PTPN20-205ENST00000395721 FAM208AQ9UK61 1670 aaKnown RBP12.2□□□□□ -0.46
PTPN20-205ENST00000395721 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
PTPN20-205ENST00000395721 BCL9O00512 1426 aa12.2□□□□□ -0.46
PTPN20-205ENST00000395721 RREB1Q92766 1687 aa12.2□□□□□ -0.46
PTPN20-205ENST00000395721 KIF20BQ96Q89 1820 aa12.19□□□□□ -0.46
PTPN20-205ENST00000395721 FYB1O15117 783 aa12.19□□□□□ -0.46
PTPN20-205ENST00000395721 HOXC9P31274 260 aa12.19□□□□□ -0.46
PTPN20-205ENST00000395721 EIF4G2P78344 907 aaKnown RBP eCLIP12.19□□□□□ -0.46
PTPN20-205ENST00000395721 NSD3Q9BZ95 1437 aa12.19□□□□□ -0.46
PTPN20-205ENST00000395721 MYOM1P52179 1685 aa12.18□□□□□ -0.46
PTPN20-205ENST00000395721 SBF2Q86WG5 1849 aa12.18□□□□□ -0.46
PTPN20-205ENST00000395721 LRP5O75197 1615 aa12.18□□□□□ -0.46
PTPN20-205ENST00000395721 NUP188Q5SRE5 1749 aa12.18□□□□□ -0.46
PTPN20-205ENST00000395721 SMG6Q86US8 1419 aaKnown RBP12.18□□□□□ -0.46
PTPN20-205ENST00000395721 RRS1Q15050 365 aaKnown RBP12.17□□□□□ -0.46
PTPN20-205ENST00000395721 HSPA5P11021 654 aaKnown RBP12.17□□□□□ -0.46
PTPN20-205ENST00000395721 FBLN1P23142 703 aa12.17□□□□□ -0.46
PTPN20-205ENST00000395721 RGPD3A6NKT7 1758 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-205ENST00000395721 RGPD4Q7Z3J3 1758 aa12.17□□□□□ -0.46
PTPN20-205ENST00000395721 PLSCR1O15162 318 aa12.16□□□□□ -0.46
PTPN20-205ENST00000395721 CARD14Q9BXL6 1004 aa12.15□□□□□ -0.46
PTPN20-205ENST00000395721 CGNL1Q0VF96 1302 aa12.15□□□□□ -0.46
PTPN20-205ENST00000395721 ACSBG1Q96GR2 724 aa12.15□□□□□ -0.46
PTPN20-205ENST00000395721 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
PTPN20-205ENST00000395721 FLT4P35916 1363 aa12.14□□□□□ -0.47
PTPN20-205ENST00000395721 NHSQ6T4R5 1651 aa12.14□□□□□ -0.47
PTPN20-205ENST00000395721 KIF24Q5T7B8 1368 aa12.14□□□□□ -0.47
PTPN20-205ENST00000395721 DDX54Q8TDD1 881 aaKnown RBP12.13□□□□□ -0.47
PTPN20-205ENST00000395721 INSRP06213 1382 aa12.13□□□□□ -0.47
PTPN20-205ENST00000395721 KCNQ2O43526 872 aa12.12□□□□□ -0.47
PTPN20-205ENST00000395721 RAPGEF4Q8WZA2 1011 aa12.12□□□□□ -0.47
PTPN20-205ENST00000395721 TXNRD1Q16881 649 aa12.12□□□□□ -0.47
PTPN20-205ENST00000395721 USHBP1Q8N6Y0 703 aa12.11□□□□□ -0.47
PTPN20-205ENST00000395721 ZCRB1Q8TBF4 217 aaKnown RBP12.11□□□□□ -0.47
PTPN20-205ENST00000395721 STK32BQ9NY57 414 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms