RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 PLSCR1O15162 318 aa23.05■■□□□ 1.28
SNCA-205ENST00000394991 CENPJQ9HC77 1338 aaPredicted RBP23.05■■□□□ 1.28
SNCA-205ENST00000394991 DDB1Q16531 1140 aa23.03■■□□□ 1.28
SNCA-205ENST00000394991 PDGFDQ9GZP0 370 aaPredicted RBP23.03■■□□□ 1.28
SNCA-205ENST00000394991 NLRP6P59044 892 aa23.02■■□□□ 1.28
SNCA-205ENST00000394991 TOM1L2Q6ZVM7 507 aa23.01■■□□□ 1.27
SNCA-205ENST00000394991 CPSF1Q10570 1443 aaKnown RBP23■■□□□ 1.27
SNCA-205ENST00000394991 PROM2Q8N271 834 aa23■■□□□ 1.27
SNCA-205ENST00000394991 MARCH10Q8NA82 808 aaPredicted RBP23■■□□□ 1.27
SNCA-205ENST00000394991 BCL11BQ9C0K0 894 aaPredicted RBP23■■□□□ 1.27
SNCA-205ENST00000394991 CABP1Q9NZU7 370 aa23■■□□□ 1.27
SNCA-205ENST00000394991 AXIN2Q9Y2T1 843 aa23■■□□□ 1.27
SNCA-205ENST00000394991 WDR17Q8IZU2 1322 aa23■■□□□ 1.27
SNCA-205ENST00000394991 BCL9O00512 1426 aa22.99■■□□□ 1.27
SNCA-205ENST00000394991 DCAF8L1A6NGE4 600 aa22.97■■□□□ 1.27
SNCA-205ENST00000394991 TRPM1Q7Z4N2 1603 aa22.97■■□□□ 1.27
SNCA-205ENST00000394991 ZBTB7AO95365 584 aa22.95■■□□□ 1.26
SNCA-205ENST00000394991 NFAT5O94916 1531 aa22.94■■□□□ 1.26
SNCA-205ENST00000394991 PTGER2P43116 358 aa22.94■■□□□ 1.26
SNCA-205ENST00000394991 NHSQ6T4R5 1651 aa22.93■■□□□ 1.26
SNCA-205ENST00000394991 ARHGEF25Q86VW2 580 aa22.93■■□□□ 1.26
SNCA-205ENST00000394991 CHD4Q14839 1912 aa22.92■■□□□ 1.26
SNCA-205ENST00000394991 CDCA7Q9BWT1 371 aaPredicted RBP22.92■■□□□ 1.26
SNCA-205ENST00000394991 TXNRD1Q16881 649 aa22.91■■□□□ 1.26
SNCA-205ENST00000394991 TTC21BQ7Z4L5 1316 aa22.9■■□□□ 1.26
SNCA-205ENST00000394991 CARD10Q9BWT7 1032 aa22.9■■□□□ 1.26
SNCA-205ENST00000394991 ATF5Q9Y2D1 282 aaPredicted RBP22.9■■□□□ 1.26
SNCA-205ENST00000394991 PAPPAQ13219 1627 aa22.9■■□□□ 1.26
SNCA-205ENST00000394991 MON2Q7Z3U7 1717 aa22.89■■□□□ 1.26
SNCA-205ENST00000394991 TNS2Q63HR2 1409 aa22.89■■□□□ 1.25
SNCA-205ENST00000394991 ABCC6O95255 1503 aa22.88■■□□□ 1.25
SNCA-205ENST00000394991 SOX12O15370 315 aa22.88■■□□□ 1.25
SNCA-205ENST00000394991 STK32BQ9NY57 414 aa22.88■■□□□ 1.25
SNCA-205ENST00000394991 EVC2Q86UK5 1308 aa22.87■■□□□ 1.25
SNCA-205ENST00000394991 CSB-PGBD3P0DP91 1061 aa22.87■■□□□ 1.25
SNCA-205ENST00000394991 SLC15A2Q16348 729 aa22.87■■□□□ 1.25
SNCA-205ENST00000394991 USP54Q70EL1 1684 aa22.87■■□□□ 1.25
SNCA-205ENST00000394991 BTAF1O14981 1849 aa22.87■■□□□ 1.25
SNCA-205ENST00000394991 KCNH5Q8NCM2 988 aa22.86■■□□□ 1.25
SNCA-205ENST00000394991 LTN1O94822 1766 aa22.86■■□□□ 1.25
SNCA-205ENST00000394991 SGIP1Q9BQI5 828 aa22.85■■□□□ 1.25
SNCA-205ENST00000394991 FHDC1Q9C0D6 1143 aaPredicted RBP22.85■■□□□ 1.25
SNCA-205ENST00000394991 CCDC7Q96M83 1385 aa22.85■■□□□ 1.25
SNCA-205ENST00000394991 KAT6BQ8WYB5 2073 aa22.85■■□□□ 1.25
SNCA-205ENST00000394991 EXOC5O00471 708 aa22.84■■□□□ 1.25
SNCA-205ENST00000394991 ZNF784Q8NCA9 323 aaPredicted RBP22.84■■□□□ 1.25
SNCA-205ENST00000394991 UTRNP46939 3433 aa22.84■■□□□ 1.25
SNCA-205ENST00000394991 TTC21AQ8NDW8 1320 aa22.83■■□□□ 1.25
SNCA-205ENST00000394991 SYT17Q9BSW7 474 aa22.83■■□□□ 1.25
SNCA-205ENST00000394991 ZNF692Q9BU19 519 aaPredicted RBP22.82■■□□□ 1.24
SNCA-205ENST00000394991 MTFR1LQ9H019 292 aa22.81■■□□□ 1.24
SNCA-205ENST00000394991 L3MBTL2Q969R5 705 aa22.8■■□□□ 1.24
SNCA-205ENST00000394991 KTN1Q86UP2 1357 aaKnown RBP22.79■■□□□ 1.24
SNCA-205ENST00000394991 ACSBG1Q96GR2 724 aa22.79■■□□□ 1.24
SNCA-205ENST00000394991 QSER1Q2KHR3 1735 aa22.77■■□□□ 1.24
SNCA-205ENST00000394991 TUBGCP6Q96RT7 1819 aa22.77■■□□□ 1.24
SNCA-205ENST00000394991 COL24A1Q17RW2 1714 aa22.76■■□□□ 1.23
SNCA-205ENST00000394991 ERBB3P21860 1342 aa22.76■■□□□ 1.23
SNCA-205ENST00000394991 USP31Q70CQ4 1352 aa22.75■■□□□ 1.23
SNCA-205ENST00000394991 CD163L1Q9NR16 1453 aa22.74■■□□□ 1.23
SNCA-205ENST00000394991 ZNF827Q17R98 1081 aa22.74■■□□□ 1.23
SNCA-205ENST00000394991 ARXQ96QS3 562 aa22.74■■□□□ 1.23
SNCA-205ENST00000394991 ROCK2O75116 1388 aaKnown RBP22.74■■□□□ 1.23
SNCA-205ENST00000394991 MAP3K5Q99683 1374 aa22.74■■□□□ 1.23
SNCA-205ENST00000394991 NLRP2Q9NX02 1062 aa22.72■■□□□ 1.23
SNCA-205ENST00000394991 NME9Q86XW9 330 aa22.71■■□□□ 1.23
SNCA-205ENST00000394991 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.71■■□□□ 1.23
SNCA-205ENST00000394991 LRRC4BQ9NT99 713 aa22.71■■□□□ 1.23
SNCA-205ENST00000394991 IL2RBP14784 551 aa22.7■■□□□ 1.22
SNCA-205ENST00000394991 SBNO2Q9Y2G9 1366 aa22.7■■□□□ 1.22
SNCA-205ENST00000394991 FAM208AQ9UK61 1670 aaKnown RBP22.68■■□□□ 1.22
SNCA-205ENST00000394991 SIN3AQ96ST3 1273 aa22.68■■□□□ 1.22
SNCA-205ENST00000394991 DOT1LQ8TEK3 1739 aa22.68■■□□□ 1.22
SNCA-205ENST00000394991 ANKRD24Q8TF21 1146 aa22.67■■□□□ 1.22
SNCA-205ENST00000394991 LY75O60449 1722 aa22.66■■□□□ 1.22
SNCA-205ENST00000394991 SHANK3Q9BYB0 1731 aa22.66■■□□□ 1.22
SNCA-205ENST00000394991 AKT1S1Q96B36 256 aa22.66■■□□□ 1.22
SNCA-205ENST00000394991 SENP3-EIF4A1A0A087X0R7 540 aa22.65■■□□□ 1.22
SNCA-205ENST00000394991 C1QTNF8P60827 252 aa22.65■■□□□ 1.22
SNCA-205ENST00000394991 RGPD2P0DJD1 1756 aa22.65■■□□□ 1.22
SNCA-205ENST00000394991 EDC4Q6P2E9 1401 aaKnown RBP22.62■■□□□ 1.21
SNCA-205ENST00000394991 PNPLA7Q6ZV29 1317 aa22.61■■□□□ 1.21
SNCA-205ENST00000394991 GPR162Q16538 588 aa22.6■■□□□ 1.21
SNCA-205ENST00000394991 NEUROD1Q13562 356 aa22.59■■□□□ 1.21
SNCA-205ENST00000394991 SLC27A3Q5K4L6 730 aa22.59■■□□□ 1.21
SNCA-205ENST00000394991 KLHL34Q8N239 644 aa22.59■■□□□ 1.21
SNCA-205ENST00000394991 SLC16A10Q8TF71 515 aa22.59■■□□□ 1.21
SNCA-205ENST00000394991 SLC12A5Q9H2X9 1139 aa22.59■■□□□ 1.21
SNCA-205ENST00000394991 KCNQ4P56696 695 aa22.58■■□□□ 1.21
SNCA-205ENST00000394991 DDX54Q8TDD1 881 aaKnown RBP22.58■■□□□ 1.21
SNCA-205ENST00000394991 TMC1Q8TDI8 760 aa22.58■■□□□ 1.21
SNCA-205ENST00000394991 A0A1W2PP64 1363 aa22.58■■□□□ 1.21
SNCA-205ENST00000394991 HDGFL2Q7Z4V5 671 aaPredicted RBP22.57■■□□□ 1.2
SNCA-205ENST00000394991 NSD2O96028 1365 aa22.57■■□□□ 1.2
SNCA-205ENST00000394991 POLD1P28340 1107 aa22.56■■□□□ 1.2
SNCA-205ENST00000394991 IP6K1Q92551 441 aa22.56■■□□□ 1.2
SNCA-205ENST00000394991 GOLGB1Q14789 3259 aaKnown RBP22.55■■□□□ 1.2
SNCA-205ENST00000394991 NLGN2Q8NFZ4 835 aa22.55■■□□□ 1.2
SNCA-205ENST00000394991 LTV1Q96GA3 475 aaPredicted RBP22.55■■□□□ 1.2
SNCA-205ENST00000394991 ANKRD36BQ8N2N9 1353 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms