RNA–Protein interactions for RNA: ENST00000394547.7

TRPT1-203, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRPT1, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-203ENST00000394547 GJD4Q96KN9 370 aaPredicted RBP26.18■■□□□ 1.78
TRPT1-203ENST00000394547 ZBTB7CA1YPR0 619 aa26.14■■□□□ 1.78
TRPT1-203ENST00000394547 KNSTRNQ9Y448 316 aa26.14■■□□□ 1.78
TRPT1-203ENST00000394547 RGPD5Q99666 1765 aa26.14■■□□□ 1.78
TRPT1-203ENST00000394547 RGS12O14924 1447 aa26.13■■□□□ 1.77
TRPT1-203ENST00000394547 BLMP54132 1417 aaPredicted RBP26.13■■□□□ 1.77
TRPT1-203ENST00000394547 RTL1A6NKG5 1358 aa26.12■■□□□ 1.77
TRPT1-203ENST00000394547 SPATA31A5Q5VU36 1347 aa26.12■■□□□ 1.77
TRPT1-203ENST00000394547 SPATA31A7Q8IWB4 1347 aa26.12■■□□□ 1.77
TRPT1-203ENST00000394547 EVA1CP58658 441 aa26.11■■□□□ 1.77
TRPT1-203ENST00000394547 PIAS4Q8N2W9 510 aaPredicted RBP26.11■■□□□ 1.77
TRPT1-203ENST00000394547 STRN4Q9NRL3 753 aa26.11■■□□□ 1.77
TRPT1-203ENST00000394547 KIF24Q5T7B8 1368 aa26.1■■□□□ 1.77
TRPT1-203ENST00000394547 AXIN2Q9Y2T1 843 aa26.1■■□□□ 1.77
TRPT1-203ENST00000394547 CCDC9Q9Y3X0 531 aaKnown RBP26.1■■□□□ 1.77
TRPT1-203ENST00000394547 CRB1P82279 1406 aa26.09■■□□□ 1.77
TRPT1-203ENST00000394547 SPATA31A1Q5TZJ5 1347 aa26.09■■□□□ 1.77
TRPT1-203ENST00000394547 PER1O15534 1290 aaPredicted RBP26.08■■□□□ 1.77
TRPT1-203ENST00000394547 FAM208AQ9UK61 1670 aaKnown RBP26.08■■□□□ 1.77
TRPT1-203ENST00000394547 MAP3K19Q56UN5 1328 aa26.08■■□□□ 1.77
TRPT1-203ENST00000394547 WDR17Q8IZU2 1322 aa26.08■■□□□ 1.77
TRPT1-203ENST00000394547 ONECUT3O60422 494 aaPredicted RBP26.06■■□□□ 1.76
TRPT1-203ENST00000394547 AMER1Q5JTC6 1135 aaPredicted RBP26.06■■□□□ 1.76
TRPT1-203ENST00000394547 IP6K1Q92551 441 aa26.06■■□□□ 1.76
TRPT1-203ENST00000394547 NPC1L1Q9UHC9 1359 aa26.06■■□□□ 1.76
TRPT1-203ENST00000394547 THSD7AQ9UPZ6 1657 aa26.06■■□□□ 1.76
TRPT1-203ENST00000394547 LARP1Q6PKG0 1096 aaKnown RBP26.05■■□□□ 1.76
TRPT1-203ENST00000394547 ERBB3P21860 1342 aa26.05■■□□□ 1.76
TRPT1-203ENST00000394547 THRAP3Q9Y2W1 955 aaKnown RBP26.04■■□□□ 1.76
TRPT1-203ENST00000394547 PEAK1Q9H792 1746 aa26.03■■□□□ 1.76
TRPT1-203ENST00000394547 MAP2P11137 1827 aaKnown RBP26.03■■□□□ 1.76
TRPT1-203ENST00000394547 AMPHP49418 695 aa26.03■■□□□ 1.76
TRPT1-203ENST00000394547 FLT4P35916 1363 aa26.03■■□□□ 1.76
TRPT1-203ENST00000394547 WNK3Q9BYP7 1800 aa26.02■■□□□ 1.76
TRPT1-203ENST00000394547 HOXC9P31274 260 aa26.02■■□□□ 1.76
TRPT1-203ENST00000394547 RRS1Q15050 365 aaKnown RBP26.02■■□□□ 1.76
TRPT1-203ENST00000394547 FBLN1P23142 703 aa26.01■■□□□ 1.75
TRPT1-203ENST00000394547 BARGINQ6ZT62 677 aa26.01■■□□□ 1.75
TRPT1-203ENST00000394547 TOM1L2Q6ZVM7 507 aa26■■□□□ 1.75
TRPT1-203ENST00000394547 TCP11L2Q8N4U5 519 aa26■■□□□ 1.75
TRPT1-203ENST00000394547 CSB-PGBD3P0DP91 1061 aa25.99■■□□□ 1.75
TRPT1-203ENST00000394547 FAM98CQ17RN3 349 aaKnown RBP25.99■■□□□ 1.75
TRPT1-203ENST00000394547 MORC1Q86VD1 984 aa25.99■■□□□ 1.75
TRPT1-203ENST00000394547 ANKRD24Q8TF21 1146 aa25.99■■□□□ 1.75
TRPT1-203ENST00000394547 SMG6Q86US8 1419 aaKnown RBP25.98■■□□□ 1.75
TRPT1-203ENST00000394547 INSRP06213 1382 aa25.98■■□□□ 1.75
TRPT1-203ENST00000394547 BRWD3Q6RI45 1802 aa25.98■■□□□ 1.75
TRPT1-203ENST00000394547 PARP4Q9UKK3 1724 aaKnown RBP25.98■■□□□ 1.75
TRPT1-203ENST00000394547 CARD10Q9BWT7 1032 aa25.98■■□□□ 1.75
TRPT1-203ENST00000394547 SEPT12Q8IYM1 358 aa25.97■■□□□ 1.75
TRPT1-203ENST00000394547 USP35Q9P2H5 1018 aa25.96■■□□□ 1.75
TRPT1-203ENST00000394547 EMILIN1Q9Y6C2 1016 aa25.96■■□□□ 1.75
TRPT1-203ENST00000394547 SOCS7O14512 581 aa25.95■■□□□ 1.74
TRPT1-203ENST00000394547 POLKQ9UBT6 870 aa25.94■■□□□ 1.74
TRPT1-203ENST00000394547 MSH5O43196 834 aa25.93■■□□□ 1.74
TRPT1-203ENST00000394547 CDCA7Q9BWT1 371 aaPredicted RBP25.92■■□□□ 1.74
TRPT1-203ENST00000394547 DISP2A7MBM2 1401 aa25.91■■□□□ 1.74
TRPT1-203ENST00000394547 A0A0G2JS52 829 aa25.91■■□□□ 1.74
TRPT1-203ENST00000394547 TNNT2P45379 298 aaPredicted RBP25.91■■□□□ 1.74
TRPT1-203ENST00000394547 MYT1Q01538 1121 aa25.91■■□□□ 1.74
TRPT1-203ENST00000394547 LRRC37A3O60309 1634 aa25.9■■□□□ 1.74
TRPT1-203ENST00000394547 HSP90AB2PQ58FF8 381 aa25.9■■□□□ 1.74
TRPT1-203ENST00000394547 CC2D1BQ5T0F9 858 aaKnown RBP25.9■■□□□ 1.74
TRPT1-203ENST00000394547 NLRP2Q9NX02 1062 aa25.9■■□□□ 1.74
TRPT1-203ENST00000394547 RGPD2P0DJD1 1756 aa25.89■■□□□ 1.73
TRPT1-203ENST00000394547 PPM1GO15355 546 aaPredicted RBP25.88■■□□□ 1.73
TRPT1-203ENST00000394547 KRT27Q7Z3Y8 459 aa25.88■■□□□ 1.73
TRPT1-203ENST00000394547 LTV1Q96GA3 475 aaPredicted RBP25.88■■□□□ 1.73
TRPT1-203ENST00000394547 EP400Q96L91 3159 aa25.84■■□□□ 1.73
TRPT1-203ENST00000394547 NCAPD2Q15021 1401 aa25.83■■□□□ 1.73
TRPT1-203ENST00000394547 TNS2Q63HR2 1409 aa25.81■■□□□ 1.72
TRPT1-203ENST00000394547 IL2RBP14784 551 aa25.81■■□□□ 1.72
TRPT1-203ENST00000394547 DDB1Q16531 1140 aa25.81■■□□□ 1.72
TRPT1-203ENST00000394547 ZNF316A6NFI3 1004 aaPredicted RBP25.8■■□□□ 1.72
TRPT1-203ENST00000394547 DDX10Q13206 875 aaKnown RBP25.8■■□□□ 1.72
TRPT1-203ENST00000394547 PDE3BQ13370 1112 aa25.8■■□□□ 1.72
TRPT1-203ENST00000394547 NBPF6Q5VWK0 638 aa25.8■■□□□ 1.72
TRPT1-203ENST00000394547 NBPF4Q96M43 638 aa25.8■■□□□ 1.72
TRPT1-203ENST00000394547 EIF4A2Q14240 407 aaKnown RBP25.78■■□□□ 1.72
TRPT1-203ENST00000394547 MTHFSP49914 203 aa25.77■■□□□ 1.72
TRPT1-203ENST00000394547 EXOC5O00471 708 aa25.76■■□□□ 1.71
TRPT1-203ENST00000394547 UPF1Q92900 1129 aaKnown RBP eCLIP25.76■■□□□ 1.71
TRPT1-203ENST00000394547 PARD3Q8TEW0 1356 aa25.76■■□□□ 1.71
TRPT1-203ENST00000394547 RGPD1P0DJD0 1748 aa25.75■■□□□ 1.71
TRPT1-203ENST00000394547 OVOS2A0A0G2JMS6 1433 aa25.75■■□□□ 1.71
TRPT1-203ENST00000394547 PLEKHG2Q9H7P9 1386 aa25.75■■□□□ 1.71
TRPT1-203ENST00000394547 MEGF6O75095 1541 aa25.74■■□□□ 1.71
TRPT1-203ENST00000394547 CNGB1Q14028 1251 aaPredicted RBP25.74■■□□□ 1.71
TRPT1-203ENST00000394547 BCL9O00512 1426 aa25.73■■□□□ 1.71
TRPT1-203ENST00000394547 IGSF1Q8N6C5 1336 aa25.73■■□□□ 1.71
TRPT1-203ENST00000394547 FAM196AQ6ZSG2 479 aa25.73■■□□□ 1.71
TRPT1-203ENST00000394547 CCDC125Q86Z20 511 aa25.73■■□□□ 1.71
TRPT1-203ENST00000394547 EYA1Q99502 592 aa25.73■■□□□ 1.71
TRPT1-203ENST00000394547 USHBP1Q8N6Y0 703 aa25.72■■□□□ 1.71
TRPT1-203ENST00000394547 RAPGEF4Q8WZA2 1011 aa25.72■■□□□ 1.71
TRPT1-203ENST00000394547 SHANK3Q9BYB0 1731 aa25.71■■□□□ 1.71
TRPT1-203ENST00000394547 COL3A1P02461 1466 aaPredicted RBP25.71■■□□□ 1.71
TRPT1-203ENST00000394547 PKD1L3Q7Z443 1732 aa25.71■■□□□ 1.71
TRPT1-203ENST00000394547 TATP17735 454 aaPredicted RBP25.69■■□□□ 1.7
TRPT1-203ENST00000394547 PPP2R1AP30153 589 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms