RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 FAM83GA6ND36 823 aa26.1■■□□□ 1.77
PSEN1-203ENST00000394157 EMILIN1Q9Y6C2 1016 aa26.1■■□□□ 1.77
PSEN1-203ENST00000394157 BLMP54132 1417 aaPredicted RBP26.1■■□□□ 1.77
PSEN1-203ENST00000394157 CDK12Q9NYV4 1490 aaPredicted RBP26.1■■□□□ 1.77
PSEN1-203ENST00000394157 MTHFSP49914 203 aa26.09■■□□□ 1.77
PSEN1-203ENST00000394157 MEX3CQ5U5Q3 659 aaKnown RBP26.09■■□□□ 1.77
PSEN1-203ENST00000394157 COL18A1P39060 1754 aa26.09■■□□□ 1.77
PSEN1-203ENST00000394157 HOXC9P31274 260 aa26.08■■□□□ 1.77
PSEN1-203ENST00000394157 LMO7Q8WWI1 1683 aa26.08■■□□□ 1.77
PSEN1-203ENST00000394157 INSRP06213 1382 aa26.07■■□□□ 1.76
PSEN1-203ENST00000394157 ZBTB7CA1YPR0 619 aa26.07■■□□□ 1.76
PSEN1-203ENST00000394157 PEAK1Q9H792 1746 aa26.06■■□□□ 1.76
PSEN1-203ENST00000394157 PPM1GO15355 546 aaPredicted RBP26.06■■□□□ 1.76
PSEN1-203ENST00000394157 CHRNA2Q15822 529 aa26.06■■□□□ 1.76
PSEN1-203ENST00000394157 CFAP53Q96M91 514 aa26.06■■□□□ 1.76
PSEN1-203ENST00000394157 NGLY1Q96IV0 654 aa26.05■■□□□ 1.76
PSEN1-203ENST00000394157 NWD2Q9ULI1 1742 aa26.05■■□□□ 1.76
PSEN1-203ENST00000394157 SLIT2O94813 1529 aa26.04■■□□□ 1.76
PSEN1-203ENST00000394157 C8orf37Q96NL8 207 aa26.04■■□□□ 1.76
PSEN1-203ENST00000394157 PLCH1Q4KWH8 1693 aa26.03■■□□□ 1.76
PSEN1-203ENST00000394157 FNBP4Q8N3X1 1017 aaPredicted RBP26.03■■□□□ 1.76
PSEN1-203ENST00000394157 CAMTA1Q9Y6Y1 1673 aa26.03■■□□□ 1.76
PSEN1-203ENST00000394157 BTG4Q9NY30 223 aa26.02■■□□□ 1.76
PSEN1-203ENST00000394157 AXIN2Q9Y2T1 843 aa26.02■■□□□ 1.76
PSEN1-203ENST00000394157 HSP90AB2PQ58FF8 381 aa26.01■■□□□ 1.75
PSEN1-203ENST00000394157 COL5A2P05997 1499 aaPredicted RBP25.99■■□□□ 1.75
PSEN1-203ENST00000394157 ERBB3P21860 1342 aa25.98■■□□□ 1.75
PSEN1-203ENST00000394157 RGPD5Q99666 1765 aa25.97■■□□□ 1.75
PSEN1-203ENST00000394157 EVA1CP58658 441 aa25.97■■□□□ 1.75
PSEN1-203ENST00000394157 UNC5CLQ8IV45 518 aa25.97■■□□□ 1.75
PSEN1-203ENST00000394157 ANKRD24Q8TF21 1146 aa25.97■■□□□ 1.75
PSEN1-203ENST00000394157 COL3A1P02461 1466 aaPredicted RBP25.97■■□□□ 1.75
PSEN1-203ENST00000394157 NRAPQ86VF7 1730 aa25.97■■□□□ 1.75
PSEN1-203ENST00000394157 FAM208AQ9UK61 1670 aaKnown RBP25.96■■□□□ 1.75
PSEN1-203ENST00000394157 WDR17Q8IZU2 1322 aa25.96■■□□□ 1.75
PSEN1-203ENST00000394157 DIAPH1O60610 1272 aaKnown RBP25.96■■□□□ 1.75
PSEN1-203ENST00000394157 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.96■■□□□ 1.75
PSEN1-203ENST00000394157 BCL9LQ86UU0 1499 aa25.96■■□□□ 1.75
PSEN1-203ENST00000394157 AFF2P51816 1311 aa25.95■■□□□ 1.75
PSEN1-203ENST00000394157 CCER2I3L3R5 266 aa25.94■■□□□ 1.74
PSEN1-203ENST00000394157 EIF4A2Q14240 407 aaKnown RBP25.94■■□□□ 1.74
PSEN1-203ENST00000394157 POTEDQ86YR6 584 aa25.94■■□□□ 1.74
PSEN1-203ENST00000394157 USP21Q9UK80 565 aa25.94■■□□□ 1.74
PSEN1-203ENST00000394157 NUDCQ9Y266 331 aa25.93■■□□□ 1.74
PSEN1-203ENST00000394157 CSB-PGBD3P0DP91 1061 aa25.92■■□□□ 1.74
PSEN1-203ENST00000394157 IL13P35225 146 aa25.92■■□□□ 1.74
PSEN1-203ENST00000394157 ZNF772Q68DY9 489 aaPredicted RBP25.91■■□□□ 1.74
PSEN1-203ENST00000394157 LTV1Q96GA3 475 aaPredicted RBP25.91■■□□□ 1.74
PSEN1-203ENST00000394157 STRN4Q9NRL3 753 aa25.91■■□□□ 1.74
PSEN1-203ENST00000394157 CRB1P82279 1406 aa25.9■■□□□ 1.74
PSEN1-203ENST00000394157 MIER1Q8N108 512 aa25.9■■□□□ 1.74
PSEN1-203ENST00000394157 VPS72Q15906 364 aa25.89■■□□□ 1.74
PSEN1-203ENST00000394157 LARP1Q6PKG0 1096 aaKnown RBP25.88■■□□□ 1.73
PSEN1-203ENST00000394157 TOM1L2Q6ZVM7 507 aa25.88■■□□□ 1.73
PSEN1-203ENST00000394157 CARD10Q9BWT7 1032 aa25.88■■□□□ 1.73
PSEN1-203ENST00000394157 MRS2Q9HD23 443 aa25.88■■□□□ 1.73
PSEN1-203ENST00000394157 NLRP2Q9NX02 1062 aa25.87■■□□□ 1.73
PSEN1-203ENST00000394157 TRPC5Q9UL62 973 aaPredicted RBP25.87■■□□□ 1.73
PSEN1-203ENST00000394157 ATRNO75882 1429 aa25.86■■□□□ 1.73
PSEN1-203ENST00000394157 NCAPD2Q15021 1401 aa25.86■■□□□ 1.73
PSEN1-203ENST00000394157 IGSF1Q8N6C5 1336 aa25.86■■□□□ 1.73
PSEN1-203ENST00000394157 RGPD1P0DJD0 1748 aa25.85■■□□□ 1.73
PSEN1-203ENST00000394157 EYA1Q99502 592 aa25.85■■□□□ 1.73
PSEN1-203ENST00000394157 SPATA31A5Q5VU36 1347 aa25.85■■□□□ 1.73
PSEN1-203ENST00000394157 SPATA31A7Q8IWB4 1347 aa25.85■■□□□ 1.73
PSEN1-203ENST00000394157 NBPF6Q5VWK0 638 aa25.84■■□□□ 1.73
PSEN1-203ENST00000394157 NBPF4Q96M43 638 aa25.84■■□□□ 1.73
PSEN1-203ENST00000394157 THRAP3Q9Y2W1 955 aaKnown RBP25.84■■□□□ 1.73
PSEN1-203ENST00000394157 CNKSR2Q8WXI2 1034 aa25.83■■□□□ 1.73
PSEN1-203ENST00000394157 SPATA31A1Q5TZJ5 1347 aa25.83■■□□□ 1.73
PSEN1-203ENST00000394157 U2SURPO15042 1029 aaKnown RBP25.82■■□□□ 1.72
PSEN1-203ENST00000394157 CCDC184Q52MB2 194 aa25.82■■□□□ 1.72
PSEN1-203ENST00000394157 NCBP3Q53F19 620 aaKnown RBP25.82■■□□□ 1.72
PSEN1-203ENST00000394157 WDR43Q15061 677 aaKnown RBP eCLIP25.81■■□□□ 1.72
PSEN1-203ENST00000394157 QTRT2Q9H974 415 aaKnown RBP25.81■■□□□ 1.72
PSEN1-203ENST00000394157 CCDC9Q9Y3X0 531 aaKnown RBP25.81■■□□□ 1.72
PSEN1-203ENST00000394157 KDRP35968 1356 aa25.81■■□□□ 1.72
PSEN1-203ENST00000394157 PLEKHG2Q9H7P9 1386 aa25.81■■□□□ 1.72
PSEN1-203ENST00000394157 TCP11L2Q8N4U5 519 aa25.8■■□□□ 1.72
PSEN1-203ENST00000394157 RGPD2P0DJD1 1756 aa25.79■■□□□ 1.72
PSEN1-203ENST00000394157 U2AF1L5P0DN76 240 aaPredicted RBP25.79■■□□□ 1.72
PSEN1-203ENST00000394157 U2AF1Q01081 240 aaKnown RBP eCLIP25.79■■□□□ 1.72
PSEN1-203ENST00000394157 GJD4Q96KN9 370 aaPredicted RBP25.79■■□□□ 1.72
PSEN1-203ENST00000394157 BARGINQ6ZT62 677 aa25.78■■□□□ 1.72
PSEN1-203ENST00000394157 PNISRQ8TF01 805 aaKnown RBP25.78■■□□□ 1.72
PSEN1-203ENST00000394157 CDCA7Q9BWT1 371 aaPredicted RBP25.78■■□□□ 1.72
PSEN1-203ENST00000394157 SOCS7O14512 581 aa25.77■■□□□ 1.72
PSEN1-203ENST00000394157 FCHSD2O94868 740 aa25.77■■□□□ 1.72
PSEN1-203ENST00000394157 SULT6B1Q6IMI4 303 aa25.77■■□□□ 1.72
PSEN1-203ENST00000394157 PNNQ9H307 717 aaKnown RBP25.77■■□□□ 1.72
PSEN1-203ENST00000394157 USP35Q9P2H5 1018 aa25.75■■□□□ 1.71
PSEN1-203ENST00000394157 RGS17Q9UGC6 210 aaPredicted RBP25.75■■□□□ 1.71
PSEN1-203ENST00000394157 RBM6P78332 1123 aaKnown RBP25.74■■□□□ 1.71
PSEN1-203ENST00000394157 USHBP1Q8N6Y0 703 aa25.74■■□□□ 1.71
PSEN1-203ENST00000394157 RAPGEF4Q8WZA2 1011 aa25.74■■□□□ 1.71
PSEN1-203ENST00000394157 IL2RBP14784 551 aa25.73■■□□□ 1.71
PSEN1-203ENST00000394157 ILDR2Q71H61 639 aa25.73■■□□□ 1.71
PSEN1-203ENST00000394157 GLI3P10071 1580 aa25.73■■□□□ 1.71
PSEN1-203ENST00000394157 DISP2A7MBM2 1401 aa25.71■■□□□ 1.71
PSEN1-203ENST00000394157 ONECUT3O60422 494 aaPredicted RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms