RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TOM1L2Q6ZVM7 507 aa24.95■■□□□ 1.58
SNRPA1-202ENST00000394082 AXIN2Q9Y2T1 843 aa24.95■■□□□ 1.58
SNRPA1-202ENST00000394082 ABCC6O95255 1503 aa24.95■■□□□ 1.58
SNRPA1-202ENST00000394082 BCL9O00512 1426 aa24.94■■□□□ 1.58
SNRPA1-202ENST00000394082 LRRC37A3O60309 1634 aa24.94■■□□□ 1.58
SNRPA1-202ENST00000394082 KTN1Q86UP2 1357 aaKnown RBP24.93■■□□□ 1.58
SNRPA1-202ENST00000394082 DDB1Q16531 1140 aa24.93■■□□□ 1.58
SNRPA1-202ENST00000394082 NUP188Q5SRE5 1749 aa24.92■■□□□ 1.58
SNRPA1-202ENST00000394082 ZBTB7CA1YPR0 619 aa24.92■■□□□ 1.58
SNRPA1-202ENST00000394082 NBPF14Q5TI25 921 aa24.92■■□□□ 1.58
SNRPA1-202ENST00000394082 RGPD3A6NKT7 1758 aaPredicted RBP24.92■■□□□ 1.58
SNRPA1-202ENST00000394082 RGPD4Q7Z3J3 1758 aa24.92■■□□□ 1.58
SNRPA1-202ENST00000394082 NFAT5O94916 1531 aa24.91■■□□□ 1.58
SNRPA1-202ENST00000394082 PLSCR1O15162 318 aa24.91■■□□□ 1.58
SNRPA1-202ENST00000394082 CARD10Q9BWT7 1032 aa24.91■■□□□ 1.58
SNRPA1-202ENST00000394082 MON2Q7Z3U7 1717 aa24.91■■□□□ 1.58
SNRPA1-202ENST00000394082 USP31Q70CQ4 1352 aa24.91■■□□□ 1.58
SNRPA1-202ENST00000394082 WNK3Q9BYP7 1800 aa24.9■■□□□ 1.58
SNRPA1-202ENST00000394082 USP54Q70EL1 1684 aa24.89■■□□□ 1.58
SNRPA1-202ENST00000394082 PUS7Q96PZ0 661 aaKnown RBP24.89■■□□□ 1.58
SNRPA1-202ENST00000394082 CARD11Q9BXL7 1154 aa24.89■■□□□ 1.58
SNRPA1-202ENST00000394082 SBF2Q86WG5 1849 aa24.88■■□□□ 1.57
SNRPA1-202ENST00000394082 BCL11BQ9C0K0 894 aaPredicted RBP24.87■■□□□ 1.57
SNRPA1-202ENST00000394082 CD163L1Q9NR16 1453 aa24.86■■□□□ 1.57
SNRPA1-202ENST00000394082 CCDC7Q96M83 1385 aa24.86■■□□□ 1.57
SNRPA1-202ENST00000394082 RGPD5Q99666 1765 aa24.85■■□□□ 1.57
SNRPA1-202ENST00000394082 CSB-PGBD3P0DP91 1061 aa24.83■■□□□ 1.57
SNRPA1-202ENST00000394082 MARCH10Q8NA82 808 aaPredicted RBP24.83■■□□□ 1.57
SNRPA1-202ENST00000394082 TONSLQ96HA7 1378 aa24.82■■□□□ 1.56
SNRPA1-202ENST00000394082 EDC4Q6P2E9 1401 aaKnown RBP24.81■■□□□ 1.56
SNRPA1-202ENST00000394082 SOX12O15370 315 aa24.81■■□□□ 1.56
SNRPA1-202ENST00000394082 HDGFL2Q7Z4V5 671 aaPredicted RBP24.81■■□□□ 1.56
SNRPA1-202ENST00000394082 EXOC5O00471 708 aa24.8■■□□□ 1.56
SNRPA1-202ENST00000394082 SLC24A1O60721 1099 aa24.8■■□□□ 1.56
SNRPA1-202ENST00000394082 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.79■■□□□ 1.56
SNRPA1-202ENST00000394082 TERF2IPQ9NYB0 399 aa24.79■■□□□ 1.56
SNRPA1-202ENST00000394082 ERBB3P21860 1342 aa24.78■■□□□ 1.56
SNRPA1-202ENST00000394082 NME9Q86XW9 330 aa24.77■■□□□ 1.56
SNRPA1-202ENST00000394082 SLC12A5Q9H2X9 1139 aa24.77■■□□□ 1.56
SNRPA1-202ENST00000394082 NINLQ9Y2I6 1382 aa24.77■■□□□ 1.56
SNRPA1-202ENST00000394082 TNS2Q63HR2 1409 aa24.77■■□□□ 1.56
SNRPA1-202ENST00000394082 TMC1Q8TDI8 760 aa24.76■■□□□ 1.55
SNRPA1-202ENST00000394082 SPON1Q9HCB6 807 aa24.76■■□□□ 1.55
SNRPA1-202ENST00000394082 KCNQ2O43526 872 aa24.74■■□□□ 1.55
SNRPA1-202ENST00000394082 A0A1W2PP64 1363 aa24.74■■□□□ 1.55
SNRPA1-202ENST00000394082 LTN1O94822 1766 aa24.73■■□□□ 1.55
SNRPA1-202ENST00000394082 PTF1AQ7RTS3 328 aa24.73■■□□□ 1.55
SNRPA1-202ENST00000394082 PROM2Q8N271 834 aa24.73■■□□□ 1.55
SNRPA1-202ENST00000394082 TESK2Q96S53 571 aa24.72■■□□□ 1.55
SNRPA1-202ENST00000394082 IL2RBP14784 551 aa24.69■■□□□ 1.54
SNRPA1-202ENST00000394082 ANO8Q9HCE9 1232 aaPredicted RBP24.69■■□□□ 1.54
SNRPA1-202ENST00000394082 NLRP2Q9NX02 1062 aa24.69■■□□□ 1.54
SNRPA1-202ENST00000394082 CASZ1Q86V15 1759 aa24.68■■□□□ 1.54
SNRPA1-202ENST00000394082 ANKRD24Q8TF21 1146 aa24.68■■□□□ 1.54
SNRPA1-202ENST00000394082 NHSQ6T4R5 1651 aa24.67■■□□□ 1.54
SNRPA1-202ENST00000394082 TXNRD1Q16881 649 aa24.67■■□□□ 1.54
SNRPA1-202ENST00000394082 ST20-MTHFSA0A0A6YYL1 179 aa24.66■■□□□ 1.54
SNRPA1-202ENST00000394082 IP6K1Q92551 441 aa24.66■■□□□ 1.54
SNRPA1-202ENST00000394082 PPP1R1BQ9UD71 204 aaPredicted RBP24.65■■□□□ 1.54
SNRPA1-202ENST00000394082 FAM208AQ9UK61 1670 aaKnown RBP24.64■■□□□ 1.53
SNRPA1-202ENST00000394082 STK32BQ9NY57 414 aa24.62■■□□□ 1.53
SNRPA1-202ENST00000394082 SLC15A2Q16348 729 aa24.61■■□□□ 1.53
SNRPA1-202ENST00000394082 COG3Q96JB2 828 aa24.61■■□□□ 1.53
SNRPA1-202ENST00000394082 ANKRD36BQ8N2N9 1353 aa24.6■■□□□ 1.53
SNRPA1-202ENST00000394082 PDGFDQ9GZP0 370 aaPredicted RBP24.56■■□□□ 1.52
SNRPA1-202ENST00000394082 MAP3K19Q56UN5 1328 aa24.56■■□□□ 1.52
SNRPA1-202ENST00000394082 DCAF8L1A6NGE4 600 aa24.55■■□□□ 1.52
SNRPA1-202ENST00000394082 HOXC9P31274 260 aa24.55■■□□□ 1.52
SNRPA1-202ENST00000394082 PTGER2P43116 358 aa24.55■■□□□ 1.52
SNRPA1-202ENST00000394082 TMF1P82094 1093 aa24.55■■□□□ 1.52
SNRPA1-202ENST00000394082 TRIM26Q12899 539 aaPredicted RBP24.55■■□□□ 1.52
SNRPA1-202ENST00000394082 ACSBG1Q96GR2 724 aa24.55■■□□□ 1.52
SNRPA1-202ENST00000394082 BTAF1O14981 1849 aa24.55■■□□□ 1.52
SNRPA1-202ENST00000394082 RTL1A6NKG5 1358 aa24.54■■□□□ 1.52
SNRPA1-202ENST00000394082 PAPPAQ13219 1627 aa24.54■■□□□ 1.52
SNRPA1-202ENST00000394082 ZBTB7AO95365 584 aa24.53■■□□□ 1.52
SNRPA1-202ENST00000394082 MTFR1LQ9H019 292 aa24.53■■□□□ 1.52
SNRPA1-202ENST00000394082 USP47Q96K76 1375 aa24.52■■□□□ 1.52
SNRPA1-202ENST00000394082 AMPHP49418 695 aa24.51■■□□□ 1.51
SNRPA1-202ENST00000394082 CDCA8Q53HL2 280 aa24.51■■□□□ 1.51
SNRPA1-202ENST00000394082 FYB1O15117 783 aa24.5■■□□□ 1.51
SNRPA1-202ENST00000394082 SLC27A3Q5K4L6 730 aa24.5■■□□□ 1.51
SNRPA1-202ENST00000394082 YY1P25490 414 aa24.49■■□□□ 1.51
SNRPA1-202ENST00000394082 LTV1Q96GA3 475 aaPredicted RBP24.49■■□□□ 1.51
SNRPA1-202ENST00000394082 SGIP1Q9BQI5 828 aa24.49■■□□□ 1.51
SNRPA1-202ENST00000394082 MYOM1P52179 1685 aa24.48■■□□□ 1.51
SNRPA1-202ENST00000394082 CGNL1Q0VF96 1302 aa24.48■■□□□ 1.51
SNRPA1-202ENST00000394082 DDX54Q8TDD1 881 aaKnown RBP24.48■■□□□ 1.51
SNRPA1-202ENST00000394082 KIF24Q5T7B8 1368 aa24.47■■□□□ 1.51
SNRPA1-202ENST00000394082 TIMELESSQ9UNS1 1208 aa24.47■■□□□ 1.51
SNRPA1-202ENST00000394082 ATF5Q9Y2D1 282 aaPredicted RBP24.47■■□□□ 1.51
SNRPA1-202ENST00000394082 LRRC4BQ9NT99 713 aa24.46■■□□□ 1.51
SNRPA1-202ENST00000394082 FBLN1P23142 703 aa24.45■■□□□ 1.5
SNRPA1-202ENST00000394082 ZCRB1Q8TBF4 217 aaKnown RBP24.45■■□□□ 1.5
SNRPA1-202ENST00000394082 KAT6BQ8WYB5 2073 aa24.45■■□□□ 1.5
SNRPA1-202ENST00000394082 QSER1Q2KHR3 1735 aa24.44■■□□□ 1.5
SNRPA1-202ENST00000394082 SLC16A10Q8TF71 515 aa24.43■■□□□ 1.5
SNRPA1-202ENST00000394082 AKT1S1Q96B36 256 aa24.43■■□□□ 1.5
SNRPA1-202ENST00000394082 GGNBP2Q9H3C7 697 aa24.43■■□□□ 1.5
SNRPA1-202ENST00000394082 MEGF6O75095 1541 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms