RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 DDB1Q16531 1140 aa28.82■■■□□ 2.2
POLR2J-202ENST00000393794 WNK3Q9BYP7 1800 aa28.8■■■□□ 2.2
POLR2J-202ENST00000393794 PIK3C2AO00443 1686 aa28.8■■■□□ 2.2
POLR2J-202ENST00000393794 UTRNP46939 3433 aa28.8■■■□□ 2.2
POLR2J-202ENST00000393794 WDR17Q8IZU2 1322 aa28.8■■■□□ 2.2
POLR2J-202ENST00000393794 MARCH10Q8NA82 808 aaPredicted RBP28.8■■■□□ 2.2
POLR2J-202ENST00000393794 PPP1R1BQ9UD71 204 aaPredicted RBP28.79■■■□□ 2.2
POLR2J-202ENST00000393794 QRICH2Q9H0J4 1663 aa28.78■■■□□ 2.2
POLR2J-202ENST00000393794 ARHGEF25Q86VW2 580 aa28.77■■■□□ 2.2
POLR2J-202ENST00000393794 CDCA7Q9BWT1 371 aaPredicted RBP28.77■■■□□ 2.2
POLR2J-202ENST00000393794 PDGFDQ9GZP0 370 aaPredicted RBP28.77■■■□□ 2.2
POLR2J-202ENST00000393794 TOM1L2Q6ZVM7 507 aa28.76■■■□□ 2.19
POLR2J-202ENST00000393794 CPSF1Q10570 1443 aaKnown RBP28.75■■■□□ 2.19
POLR2J-202ENST00000393794 PTGER2P43116 358 aa28.74■■■□□ 2.19
POLR2J-202ENST00000393794 CARD10Q9BWT7 1032 aa28.73■■■□□ 2.19
POLR2J-202ENST00000393794 RGPD5Q99666 1765 aa28.72■■■□□ 2.19
POLR2J-202ENST00000393794 AKAP12Q02952 1782 aa28.71■■■□□ 2.19
POLR2J-202ENST00000393794 ZBTB7CA1YPR0 619 aa28.7■■■□□ 2.18
POLR2J-202ENST00000393794 TTC21BQ7Z4L5 1316 aa28.69■■■□□ 2.18
POLR2J-202ENST00000393794 ZNF692Q9BU19 519 aaPredicted RBP28.69■■■□□ 2.18
POLR2J-202ENST00000393794 KCNH5Q8NCM2 988 aa28.68■■■□□ 2.18
POLR2J-202ENST00000393794 DCAF8L1A6NGE4 600 aa28.67■■■□□ 2.18
POLR2J-202ENST00000393794 TXNRD1Q16881 649 aa28.67■■■□□ 2.18
POLR2J-202ENST00000393794 NFAT5O94916 1531 aa28.67■■■□□ 2.18
POLR2J-202ENST00000393794 SGIP1Q9BQI5 828 aa28.66■■■□□ 2.18
POLR2J-202ENST00000393794 MYOM1P52179 1685 aa28.66■■■□□ 2.18
POLR2J-202ENST00000393794 EVC2Q86UK5 1308 aa28.66■■■□□ 2.18
POLR2J-202ENST00000393794 TRPM1Q7Z4N2 1603 aa28.65■■■□□ 2.18
POLR2J-202ENST00000393794 ZBTB7AO95365 584 aa28.65■■■□□ 2.18
POLR2J-202ENST00000393794 SLC15A2Q16348 729 aa28.64■■■□□ 2.18
POLR2J-202ENST00000393794 TTC21AQ8NDW8 1320 aa28.64■■■□□ 2.17
POLR2J-202ENST00000393794 ABCC6O95255 1503 aa28.64■■■□□ 2.17
POLR2J-202ENST00000393794 EXOC5O00471 708 aa28.62■■■□□ 2.17
POLR2J-202ENST00000393794 CCDC7Q96M83 1385 aa28.62■■■□□ 2.17
POLR2J-202ENST00000393794 L3MBTL2Q969R5 705 aa28.61■■■□□ 2.17
POLR2J-202ENST00000393794 SYT17Q9BSW7 474 aa28.59■■■□□ 2.17
POLR2J-202ENST00000393794 STK32BQ9NY57 414 aa28.59■■■□□ 2.17
POLR2J-202ENST00000393794 ATF5Q9Y2D1 282 aaPredicted RBP28.59■■■□□ 2.17
POLR2J-202ENST00000393794 TNS2Q63HR2 1409 aa28.59■■■□□ 2.17
POLR2J-202ENST00000393794 NHSQ6T4R5 1651 aa28.57■■■□□ 2.16
POLR2J-202ENST00000393794 PAPPAQ13219 1627 aa28.56■■■□□ 2.16
POLR2J-202ENST00000393794 USP31Q70CQ4 1352 aa28.56■■■□□ 2.16
POLR2J-202ENST00000393794 MTFR1LQ9H019 292 aa28.56■■■□□ 2.16
POLR2J-202ENST00000393794 USP54Q70EL1 1684 aa28.55■■■□□ 2.16
POLR2J-202ENST00000393794 CSB-PGBD3P0DP91 1061 aa28.55■■■□□ 2.16
POLR2J-202ENST00000393794 ZNF784Q8NCA9 323 aaPredicted RBP28.55■■■□□ 2.16
POLR2J-202ENST00000393794 FHDC1Q9C0D6 1143 aaPredicted RBP28.55■■■□□ 2.16
POLR2J-202ENST00000393794 MON2Q7Z3U7 1717 aa28.53■■■□□ 2.16
POLR2J-202ENST00000393794 SOX12O15370 315 aa28.52■■■□□ 2.16
POLR2J-202ENST00000393794 KTN1Q86UP2 1357 aaKnown RBP28.51■■■□□ 2.16
POLR2J-202ENST00000393794 ERBB3P21860 1342 aa28.51■■■□□ 2.15
POLR2J-202ENST00000393794 CHD4Q14839 1912 aa28.51■■■□□ 2.15
POLR2J-202ENST00000393794 MAP3K5Q99683 1374 aa28.5■■■□□ 2.15
POLR2J-202ENST00000393794 CD163L1Q9NR16 1453 aa28.48■■■□□ 2.15
POLR2J-202ENST00000393794 SBNO2Q9Y2G9 1366 aa28.48■■■□□ 2.15
POLR2J-202ENST00000393794 BTAF1O14981 1849 aa28.46■■■□□ 2.15
POLR2J-202ENST00000393794 ACSBG1Q96GR2 724 aa28.45■■■□□ 2.14
POLR2J-202ENST00000393794 ROCK2O75116 1388 aaKnown RBP28.45■■■□□ 2.14
POLR2J-202ENST00000393794 IL2RBP14784 551 aa28.44■■■□□ 2.14
POLR2J-202ENST00000393794 ARXQ96QS3 562 aa28.44■■■□□ 2.14
POLR2J-202ENST00000393794 LRRC4BQ9NT99 713 aa28.44■■■□□ 2.14
POLR2J-202ENST00000393794 COL24A1Q17RW2 1714 aa28.43■■■□□ 2.14
POLR2J-202ENST00000393794 ZNF827Q17R98 1081 aa28.42■■■□□ 2.14
POLR2J-202ENST00000393794 SIN3AQ96ST3 1273 aa28.42■■■□□ 2.14
POLR2J-202ENST00000393794 LTN1O94822 1766 aa28.42■■■□□ 2.14
POLR2J-202ENST00000393794 NME9Q86XW9 330 aa28.41■■■□□ 2.14
POLR2J-202ENST00000393794 NLRP2Q9NX02 1062 aa28.41■■■□□ 2.14
POLR2J-202ENST00000393794 GOLGB1Q14789 3259 aaKnown RBP28.4■■■□□ 2.14
POLR2J-202ENST00000393794 AKT1S1Q96B36 256 aa28.4■■■□□ 2.14
POLR2J-202ENST00000393794 KAT6BQ8WYB5 2073 aa28.39■■■□□ 2.14
POLR2J-202ENST00000393794 QSER1Q2KHR3 1735 aa28.39■■■□□ 2.14
POLR2J-202ENST00000393794 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.39■■■□□ 2.14
POLR2J-202ENST00000393794 ANKRD24Q8TF21 1146 aa28.37■■■□□ 2.13
POLR2J-202ENST00000393794 SLC16A10Q8TF71 515 aa28.35■■■□□ 2.13
POLR2J-202ENST00000393794 SLC27A3Q5K4L6 730 aa28.33■■■□□ 2.13
POLR2J-202ENST00000393794 EDC4Q6P2E9 1401 aaKnown RBP28.33■■■□□ 2.13
POLR2J-202ENST00000393794 C1QTNF8P60827 252 aa28.32■■■□□ 2.12
POLR2J-202ENST00000393794 SLC12A5Q9H2X9 1139 aa28.32■■■□□ 2.12
POLR2J-202ENST00000393794 IP6K1Q92551 441 aa28.3■■■□□ 2.12
POLR2J-202ENST00000393794 PUS7Q96PZ0 661 aaKnown RBP28.3■■■□□ 2.12
POLR2J-202ENST00000393794 PNPLA7Q6ZV29 1317 aa28.29■■■□□ 2.12
POLR2J-202ENST00000393794 TUBGCP6Q96RT7 1819 aa28.27■■■□□ 2.12
POLR2J-202ENST00000393794 A0A1W2PP64 1363 aa28.26■■■□□ 2.12
POLR2J-202ENST00000393794 FAM208AQ9UK61 1670 aaKnown RBP28.26■■■□□ 2.12
POLR2J-202ENST00000393794 HDGFL2Q7Z4V5 671 aaPredicted RBP28.26■■■□□ 2.11
POLR2J-202ENST00000393794 LY75O60449 1722 aa28.26■■■□□ 2.11
POLR2J-202ENST00000393794 NEUROD1Q13562 356 aa28.25■■■□□ 2.11
POLR2J-202ENST00000393794 NSD2O96028 1365 aa28.24■■■□□ 2.11
POLR2J-202ENST00000393794 TMC1Q8TDI8 760 aa28.24■■■□□ 2.11
POLR2J-202ENST00000393794 ANKRD36BQ8N2N9 1353 aa28.23■■■□□ 2.11
POLR2J-202ENST00000393794 GPR162Q16538 588 aa28.22■■■□□ 2.11
POLR2J-202ENST00000393794 DDX54Q8TDD1 881 aaKnown RBP28.22■■■□□ 2.11
POLR2J-202ENST00000393794 TERF2IPQ9NYB0 399 aa28.22■■■□□ 2.11
POLR2J-202ENST00000393794 SHANK3Q9BYB0 1731 aa28.21■■■□□ 2.11
POLR2J-202ENST00000393794 CARD11Q9BXL7 1154 aa28.21■■■□□ 2.11
POLR2J-202ENST00000393794 SENP3-EIF4A1A0A087X0R7 540 aa28.2■■■□□ 2.1
POLR2J-202ENST00000393794 PRIM1P49642 420 aaKnown RBP28.2■■■□□ 2.1
POLR2J-202ENST00000393794 CEP350Q5VT06 3117 aa28.19■■■□□ 2.1
POLR2J-202ENST00000393794 POLD1P28340 1107 aa28.19■■■□□ 2.1
POLR2J-202ENST00000393794 KCNQ4P56696 695 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms