RNA–Protein interactions for RNA: ENST00000393747.3

CTTN-204, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-204ENST00000393747 TMC1Q8TDI8 760 aa25.5■■□□□ 1.67
CTTN-204ENST00000393747 ST20-MTHFSA0A0A6YYL1 179 aa25.49■■□□□ 1.67
CTTN-204ENST00000393747 PARP4Q9UKK3 1724 aaKnown RBP25.48■■□□□ 1.67
CTTN-204ENST00000393747 A0A1W2PP64 1363 aa25.48■■□□□ 1.67
CTTN-204ENST00000393747 TOM1L2Q6ZVM7 507 aa25.48■■□□□ 1.67
CTTN-204ENST00000393747 PUS7Q96PZ0 661 aaKnown RBP25.48■■□□□ 1.67
CTTN-204ENST00000393747 CAMKK2Q96RR4 588 aa25.48■■□□□ 1.67
CTTN-204ENST00000393747 EZH2Q15910 746 aaKnown RBP25.47■■□□□ 1.67
CTTN-204ENST00000393747 PSDA5PKW4 1024 aaPredicted RBP25.46■■□□□ 1.67
CTTN-204ENST00000393747 USP54Q70EL1 1684 aa25.45■■□□□ 1.67
CTTN-204ENST00000393747 EDC4Q6P2E9 1401 aaKnown RBP25.45■■□□□ 1.66
CTTN-204ENST00000393747 LRRC37A3O60309 1634 aa25.44■■□□□ 1.66
CTTN-204ENST00000393747 HDGFL2Q7Z4V5 671 aaPredicted RBP25.44■■□□□ 1.66
CTTN-204ENST00000393747 APBA3O96018 575 aa25.43■■□□□ 1.66
CTTN-204ENST00000393747 ABCC6O95255 1503 aa25.43■■□□□ 1.66
CTTN-204ENST00000393747 PEAK1Q9H792 1746 aa25.42■■□□□ 1.66
CTTN-204ENST00000393747 OVOS2A0A0J9YW53 1432 aa25.42■■□□□ 1.66
CTTN-204ENST00000393747 OVOS2Q6IE36 1432 aa25.42■■□□□ 1.66
CTTN-204ENST00000393747 CARD10Q9BWT7 1032 aa25.41■■□□□ 1.66
CTTN-204ENST00000393747 TERF2IPQ9NYB0 399 aa25.4■■□□□ 1.66
CTTN-204ENST00000393747 OVOS2A0A0G2JMS6 1433 aa25.4■■□□□ 1.66
CTTN-204ENST00000393747 PARD3Q8TEW0 1356 aa25.39■■□□□ 1.66
CTTN-204ENST00000393747 DDB1Q16531 1140 aa25.39■■□□□ 1.66
CTTN-204ENST00000393747 NINLQ9Y2I6 1382 aa25.39■■□□□ 1.65
CTTN-204ENST00000393747 CSB-PGBD3P0DP91 1061 aa25.38■■□□□ 1.65
CTTN-204ENST00000393747 USP47Q96K76 1375 aa25.38■■□□□ 1.65
CTTN-204ENST00000393747 R3HDM1Q15032 1099 aaKnown RBP25.37■■□□□ 1.65
CTTN-204ENST00000393747 RGPD5Q99666 1765 aa25.37■■□□□ 1.65
CTTN-204ENST00000393747 ERBB3P21860 1342 aa25.37■■□□□ 1.65
CTTN-204ENST00000393747 MARCH10Q8NA82 808 aaPredicted RBP25.37■■□□□ 1.65
CTTN-204ENST00000393747 WNK3Q9BYP7 1800 aa25.36■■□□□ 1.65
CTTN-204ENST00000393747 PTF1AQ7RTS3 328 aa25.36■■□□□ 1.65
CTTN-204ENST00000393747 CDCA7Q9BWT1 371 aaPredicted RBP25.36■■□□□ 1.65
CTTN-204ENST00000393747 LRP5O75197 1615 aa25.35■■□□□ 1.65
CTTN-204ENST00000393747 CCDC7Q96M83 1385 aa25.34■■□□□ 1.65
CTTN-204ENST00000393747 BCL9O00512 1426 aa25.33■■□□□ 1.65
CTTN-204ENST00000393747 RREB1Q92766 1687 aa25.33■■□□□ 1.65
CTTN-204ENST00000393747 C11orf95C9JLR9 678 aaPredicted RBP25.33■■□□□ 1.64
CTTN-204ENST00000393747 SLC24A1O60721 1099 aa25.31■■□□□ 1.64
CTTN-204ENST00000393747 ANKRD36BQ8N2N9 1353 aa25.31■■□□□ 1.64
CTTN-204ENST00000393747 TNS2Q63HR2 1409 aa25.3■■□□□ 1.64
CTTN-204ENST00000393747 NUP188Q5SRE5 1749 aa25.29■■□□□ 1.64
CTTN-204ENST00000393747 ANKRD24Q8TF21 1146 aa25.29■■□□□ 1.64
CTTN-204ENST00000393747 TMF1P82094 1093 aa25.28■■□□□ 1.64
CTTN-204ENST00000393747 NLRP2Q9NX02 1062 aa25.28■■□□□ 1.64
CTTN-204ENST00000393747 LTN1O94822 1766 aa25.28■■□□□ 1.64
CTTN-204ENST00000393747 BCL11BQ9C0K0 894 aaPredicted RBP25.27■■□□□ 1.64
CTTN-204ENST00000393747 FBLN1P23142 703 aa25.26■■□□□ 1.63
CTTN-204ENST00000393747 CLSPNQ9HAW4 1339 aa25.25■■□□□ 1.63
CTTN-204ENST00000393747 SBF2Q86WG5 1849 aa25.25■■□□□ 1.63
CTTN-204ENST00000393747 EXOC5O00471 708 aa25.25■■□□□ 1.63
CTTN-204ENST00000393747 IP6K1Q92551 441 aa25.25■■□□□ 1.63
CTTN-204ENST00000393747 TIMELESSQ9UNS1 1208 aa25.25■■□□□ 1.63
CTTN-204ENST00000393747 MAP3K19Q56UN5 1328 aa25.24■■□□□ 1.63
CTTN-204ENST00000393747 PLSCR1O15162 318 aa25.24■■□□□ 1.63
CTTN-204ENST00000393747 COG3Q96JB2 828 aa25.24■■□□□ 1.63
CTTN-204ENST00000393747 PCGF6Q9BYE7 350 aa25.24■■□□□ 1.63
CTTN-204ENST00000393747 FYB1O15117 783 aa25.21■■□□□ 1.63
CTTN-204ENST00000393747 IL2RBP14784 551 aa25.21■■□□□ 1.63
CTTN-204ENST00000393747 PROM2Q8N271 834 aa25.21■■□□□ 1.63
CTTN-204ENST00000393747 RGPD3A6NKT7 1758 aaPredicted RBP25.21■■□□□ 1.63
CTTN-204ENST00000393747 RGPD4Q7Z3J3 1758 aa25.21■■□□□ 1.63
CTTN-204ENST00000393747 KCNQ2O43526 872 aa25.19■■□□□ 1.62
CTTN-204ENST00000393747 HOXC9P31274 260 aa25.19■■□□□ 1.62
CTTN-204ENST00000393747 NBPF14Q5TI25 921 aa25.19■■□□□ 1.62
CTTN-204ENST00000393747 ANO8Q9HCE9 1232 aaPredicted RBP25.19■■□□□ 1.62
CTTN-204ENST00000393747 GGNBP2Q9H3C7 697 aa25.18■■□□□ 1.62
CTTN-204ENST00000393747 LTV1Q96GA3 475 aaPredicted RBP25.17■■□□□ 1.62
CTTN-204ENST00000393747 RRS1Q15050 365 aaKnown RBP25.15■■□□□ 1.62
CTTN-204ENST00000393747 CDCA8Q53HL2 280 aa25.15■■□□□ 1.62
CTTN-204ENST00000393747 CARD14Q9BXL6 1004 aa25.15■■□□□ 1.62
CTTN-204ENST00000393747 RTL1A6NKG5 1358 aa25.14■■□□□ 1.61
CTTN-204ENST00000393747 AMPHP49418 695 aa25.13■■□□□ 1.61
CTTN-204ENST00000393747 ACSBG1Q96GR2 724 aa25.13■■□□□ 1.61
CTTN-204ENST00000393747 MYOM1P52179 1685 aa25.13■■□□□ 1.61
CTTN-204ENST00000393747 NHSQ6T4R5 1651 aa25.12■■□□□ 1.61
CTTN-204ENST00000393747 TXNRD1Q16881 649 aa25.12■■□□□ 1.61
CTTN-204ENST00000393747 FAM208AQ9UK61 1670 aaKnown RBP25.11■■□□□ 1.61
CTTN-204ENST00000393747 NSD3Q9BZ95 1437 aa25.1■■□□□ 1.61
CTTN-204ENST00000393747 PDGFDQ9GZP0 370 aaPredicted RBP25.09■■□□□ 1.61
CTTN-204ENST00000393747 MEGF6O75095 1541 aa25.08■■□□□ 1.61
CTTN-204ENST00000393747 NBPF6Q5VWK0 638 aa25.07■■□□□ 1.6
CTTN-204ENST00000393747 NBPF4Q96M43 638 aa25.07■■□□□ 1.6
CTTN-204ENST00000393747 HSP90AB2PQ58FF8 381 aa25.05■■□□□ 1.6
CTTN-204ENST00000393747 DDX54Q8TDD1 881 aaKnown RBP25.05■■□□□ 1.6
CTTN-204ENST00000393747 CASZ1Q86V15 1759 aa25.04■■□□□ 1.6
CTTN-204ENST00000393747 INSRP06213 1382 aa25.03■■□□□ 1.6
CTTN-204ENST00000393747 USHBP1Q8N6Y0 703 aa25.03■■□□□ 1.6
CTTN-204ENST00000393747 KIF20BQ96Q89 1820 aa25.03■■□□□ 1.6
CTTN-204ENST00000393747 SPON1Q9HCB6 807 aa25.03■■□□□ 1.6
CTTN-204ENST00000393747 FLT4P35916 1363 aa25.02■■□□□ 1.6
CTTN-204ENST00000393747 RGPD2P0DJD1 1756 aa25.01■■□□□ 1.59
CTTN-204ENST00000393747 KIF24Q5T7B8 1368 aa25■■□□□ 1.59
CTTN-204ENST00000393747 SLC15A2Q16348 729 aa25■■□□□ 1.59
CTTN-204ENST00000393747 CCER1Q8TC90 406 aaPredicted RBP25■■□□□ 1.59
CTTN-204ENST00000393747 EMILIN1Q9Y6C2 1016 aa25■■□□□ 1.59
CTTN-204ENST00000393747 PAPPAQ13219 1627 aa25■■□□□ 1.59
CTTN-204ENST00000393747 BTAF1O14981 1849 aa24.99■■□□□ 1.59
CTTN-204ENST00000393747 SHANK3Q9BYB0 1731 aa24.99■■□□□ 1.59
CTTN-204ENST00000393747 HSPA5P11021 654 aaKnown RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms