RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 BLMP54132 1417 aaPredicted RBP19.51■□□□□ 0.71
CCDC57-204ENST00000392345 CRB1P82279 1406 aa19.5■□□□□ 0.71
CCDC57-204ENST00000392345 TCP11L2Q8N4U5 519 aa19.49■□□□□ 0.71
CCDC57-204ENST00000392345 SLC24A1O60721 1099 aa19.48■□□□□ 0.71
CCDC57-204ENST00000392345 BARGINQ6ZT62 677 aa19.48■□□□□ 0.71
CCDC57-204ENST00000392345 MYOM1P52179 1685 aa19.48■□□□□ 0.71
CCDC57-204ENST00000392345 WDR17Q8IZU2 1322 aa19.47■□□□□ 0.71
CCDC57-204ENST00000392345 DEFB132Q7Z7B7 95 aa19.46■□□□□ 0.71
CCDC57-204ENST00000392345 RGPD5Q99666 1765 aa19.45■□□□□ 0.7
CCDC57-204ENST00000392345 TOM1L2Q6ZVM7 507 aa19.45■□□□□ 0.7
CCDC57-204ENST00000392345 CCDC125Q86Z20 511 aa19.45■□□□□ 0.7
CCDC57-204ENST00000392345 SRCAPQ6ZRS2 3230 aa19.45■□□□□ 0.7
CCDC57-204ENST00000392345 ABCC6O95255 1503 aa19.45■□□□□ 0.7
CCDC57-204ENST00000392345 HSPA5P11021 654 aaKnown RBP19.44■□□□□ 0.7
CCDC57-204ENST00000392345 THRAP3Q9Y2W1 955 aaKnown RBP19.43■□□□□ 0.7
CCDC57-204ENST00000392345 PARP4Q9UKK3 1724 aaKnown RBP19.42■□□□□ 0.7
CCDC57-204ENST00000392345 LTN1O94822 1766 aa19.42■□□□□ 0.7
CCDC57-204ENST00000392345 FBLN1P23142 703 aa19.42■□□□□ 0.7
CCDC57-204ENST00000392345 CDCA8Q53HL2 280 aa19.42■□□□□ 0.7
CCDC57-204ENST00000392345 LRRC37A3O60309 1634 aa19.42■□□□□ 0.7
CCDC57-204ENST00000392345 CSB-PGBD3P0DP91 1061 aa19.41■□□□□ 0.7
CCDC57-204ENST00000392345 WNK3Q9BYP7 1800 aa19.4■□□□□ 0.7
CCDC57-204ENST00000392345 EIF4G2P78344 907 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCDC57-204ENST00000392345 COG3Q96JB2 828 aa19.4■□□□□ 0.7
CCDC57-204ENST00000392345 CARD14Q9BXL6 1004 aa19.4■□□□□ 0.7
CCDC57-204ENST00000392345 GGNBP2Q9H3C7 697 aa19.4■□□□□ 0.7
CCDC57-204ENST00000392345 ERBB3P21860 1342 aa19.4■□□□□ 0.7
CCDC57-204ENST00000392345 DISP2A7MBM2 1401 aa19.4■□□□□ 0.7
CCDC57-204ENST00000392345 FYB1O15117 783 aa19.39■□□□□ 0.69
CCDC57-204ENST00000392345 SF3B2Q13435 895 aaKnown RBP19.39■□□□□ 0.69
CCDC57-204ENST00000392345 POLR3GLQ9BT43 218 aa19.39■□□□□ 0.69
CCDC57-204ENST00000392345 NSD3Q9BZ95 1437 aa19.39■□□□□ 0.69
CCDC57-204ENST00000392345 TNS1Q9HBL0 1735 aaKnown RBP19.39■□□□□ 0.69
CCDC57-204ENST00000392345 PDE3BQ13370 1112 aa19.38■□□□□ 0.69
CCDC57-204ENST00000392345 CARD10Q9BWT7 1032 aa19.38■□□□□ 0.69
CCDC57-204ENST00000392345 MAP3K19Q56UN5 1328 aa19.37■□□□□ 0.69
CCDC57-204ENST00000392345 RGPD1P0DJD0 1748 aa19.37■□□□□ 0.69
CCDC57-204ENST00000392345 TRIM37O94972 964 aa19.36■□□□□ 0.69
CCDC57-204ENST00000392345 FAM196AQ6ZSG2 479 aa19.36■□□□□ 0.69
CCDC57-204ENST00000392345 ANKRD24Q8TF21 1146 aa19.36■□□□□ 0.69
CCDC57-204ENST00000392345 KIF20BQ96Q89 1820 aa19.35■□□□□ 0.69
CCDC57-204ENST00000392345 PEAK1Q9H792 1746 aa19.34■□□□□ 0.69
CCDC57-204ENST00000392345 CCDC7Q96M83 1385 aa19.34■□□□□ 0.69
CCDC57-204ENST00000392345 EN1Q05925 392 aaPredicted RBP19.34■□□□□ 0.69
CCDC57-204ENST00000392345 RRS1Q15050 365 aaKnown RBP19.34■□□□□ 0.69
CCDC57-204ENST00000392345 DDB1Q16531 1140 aa19.34■□□□□ 0.69
CCDC57-204ENST00000392345 IP6K1Q92551 441 aa19.34■□□□□ 0.69
CCDC57-204ENST00000392345 NLRP2Q9NX02 1062 aa19.34■□□□□ 0.69
CCDC57-204ENST00000392345 C11orf95C9JLR9 678 aaPredicted RBP19.33■□□□□ 0.68
CCDC57-204ENST00000392345 BAG6P46379 1132 aa19.33■□□□□ 0.68
CCDC57-204ENST00000392345 LTV1Q96GA3 475 aaPredicted RBP19.33■□□□□ 0.68
CCDC57-204ENST00000392345 HOXC9P31274 260 aa19.32■□□□□ 0.68
CCDC57-204ENST00000392345 OVOS2A0A0G2JMS6 1433 aa19.32■□□□□ 0.68
CCDC57-204ENST00000392345 MARCH10Q8NA82 808 aaPredicted RBP19.31■□□□□ 0.68
CCDC57-204ENST00000392345 TNS2Q63HR2 1409 aa19.31■□□□□ 0.68
CCDC57-204ENST00000392345 AMPHP49418 695 aa19.3■□□□□ 0.68
CCDC57-204ENST00000392345 CDCA7Q9BWT1 371 aaPredicted RBP19.29■□□□□ 0.68
CCDC57-204ENST00000392345 RTL1A6NKG5 1358 aa19.29■□□□□ 0.68
CCDC57-204ENST00000392345 EZH2Q15910 746 aaKnown RBP19.28■□□□□ 0.68
CCDC57-204ENST00000392345 PTF1AQ7RTS3 328 aa19.28■□□□□ 0.68
CCDC57-204ENST00000392345 APBA3O96018 575 aa19.27■□□□□ 0.68
CCDC57-204ENST00000392345 CAMKK2Q96RR4 588 aa19.26■□□□□ 0.67
CCDC57-204ENST00000392345 FAM208AQ9UK61 1670 aaKnown RBP19.26■□□□□ 0.67
CCDC57-204ENST00000392345 IL2RBP14784 551 aa19.25■□□□□ 0.67
CCDC57-204ENST00000392345 PANK3Q9H999 370 aa19.25■□□□□ 0.67
CCDC57-204ENST00000392345 EMILIN1Q9Y6C2 1016 aa19.25■□□□□ 0.67
CCDC57-204ENST00000392345 CGNL1Q0VF96 1302 aa19.25■□□□□ 0.67
CCDC57-204ENST00000392345 HSP90AB2PQ58FF8 381 aa19.24■□□□□ 0.67
CCDC57-204ENST00000392345 EXOC5O00471 708 aa19.23■□□□□ 0.67
CCDC57-204ENST00000392345 MEGF6O75095 1541 aa19.23■□□□□ 0.67
CCDC57-204ENST00000392345 RGPD2P0DJD1 1756 aa19.23■□□□□ 0.67
CCDC57-204ENST00000392345 BCL9O00512 1426 aa19.23■□□□□ 0.67
CCDC57-204ENST00000392345 KIF7Q2M1P5 1343 aa19.23■□□□□ 0.67
CCDC57-204ENST00000392345 FLT4P35916 1363 aa19.22■□□□□ 0.67
CCDC57-204ENST00000392345 PSDA5PKW4 1024 aaPredicted RBP19.22■□□□□ 0.67
CCDC57-204ENST00000392345 USHBP1Q8N6Y0 703 aa19.22■□□□□ 0.67
CCDC57-204ENST00000392345 SBF2Q86WG5 1849 aa19.22■□□□□ 0.67
CCDC57-204ENST00000392345 RREB1Q92766 1687 aa19.21■□□□□ 0.67
CCDC57-204ENST00000392345 NBPF6Q5VWK0 638 aa19.21■□□□□ 0.67
CCDC57-204ENST00000392345 NBPF4Q96M43 638 aa19.21■□□□□ 0.67
CCDC57-204ENST00000392345 INSRP06213 1382 aa19.2■□□□□ 0.66
CCDC57-204ENST00000392345 ANKRD26Q9UPS8 1709 aa19.2■□□□□ 0.66
CCDC57-204ENST00000392345 PARD3Q8TEW0 1356 aa19.19■□□□□ 0.66
CCDC57-204ENST00000392345 NUP188Q5SRE5 1749 aa19.19■□□□□ 0.66
CCDC57-204ENST00000392345 KIF24Q5T7B8 1368 aa19.19■□□□□ 0.66
CCDC57-204ENST00000392345 SMG6Q86US8 1419 aaKnown RBP19.18■□□□□ 0.66
CCDC57-204ENST00000392345 KCNQ2O43526 872 aa19.18■□□□□ 0.66
CCDC57-204ENST00000392345 TNNT2P45379 298 aaPredicted RBP19.18■□□□□ 0.66
CCDC57-204ENST00000392345 BCL11BQ9C0K0 894 aaPredicted RBP19.18■□□□□ 0.66
CCDC57-204ENST00000392345 PPM1GO15355 546 aaPredicted RBP19.17■□□□□ 0.66
CCDC57-204ENST00000392345 R3HDM1Q15032 1099 aaKnown RBP19.17■□□□□ 0.66
CCDC57-204ENST00000392345 ACSBG1Q96GR2 724 aa19.17■□□□□ 0.66
CCDC57-204ENST00000392345 POLKQ9UBT6 870 aa19.16■□□□□ 0.66
CCDC57-204ENST00000392345 NHSQ6T4R5 1651 aa19.16■□□□□ 0.66
CCDC57-204ENST00000392345 SHANK3Q9BYB0 1731 aa19.16■□□□□ 0.66
CCDC57-204ENST00000392345 DDX54Q8TDD1 881 aaKnown RBP19.15■□□□□ 0.66
CCDC57-204ENST00000392345 NSD2O96028 1365 aa19.13■□□□□ 0.65
CCDC57-204ENST00000392345 RGPD3A6NKT7 1758 aaPredicted RBP19.13■□□□□ 0.65
CCDC57-204ENST00000392345 RGPD4Q7Z3J3 1758 aa19.13■□□□□ 0.65
CCDC57-204ENST00000392345 WASHC2AQ641Q2 1341 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms