RNA–Protein interactions for RNA: ENST00000391764.7

NDUFA3-204, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3 BASIC

Gene NDUFA3, Length 267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-204ENST00000391764 PANK3Q9H999 370 aa22.3■■□□□ 1.16
NDUFA3-204ENST00000391764 WASHC2AQ641Q2 1341 aa22.3■■□□□ 1.16
NDUFA3-204ENST00000391764 BRWD3Q6RI45 1802 aa22.29■■□□□ 1.16
NDUFA3-204ENST00000391764 WNK3Q9BYP7 1800 aa22.27■■□□□ 1.16
NDUFA3-204ENST00000391764 CGNL1Q0VF96 1302 aa22.26■■□□□ 1.15
NDUFA3-204ENST00000391764 FBLN1P23142 703 aa22.25■■□□□ 1.15
NDUFA3-204ENST00000391764 EVA1CP58658 441 aa22.25■■□□□ 1.15
NDUFA3-204ENST00000391764 AXIN2Q9Y2T1 843 aa22.25■■□□□ 1.15
NDUFA3-204ENST00000391764 SPATA31A5Q5VU36 1347 aa22.25■■□□□ 1.15
NDUFA3-204ENST00000391764 SPATA31A7Q8IWB4 1347 aa22.25■■□□□ 1.15
NDUFA3-204ENST00000391764 THSD7AQ9UPZ6 1657 aa22.24■■□□□ 1.15
NDUFA3-204ENST00000391764 PEAK1Q9H792 1746 aa22.24■■□□□ 1.15
NDUFA3-204ENST00000391764 LARP1Q6PKG0 1096 aaKnown RBP22.24■■□□□ 1.15
NDUFA3-204ENST00000391764 ZEB1P37275 1124 aaPredicted RBP22.23■■□□□ 1.15
NDUFA3-204ENST00000391764 MAP2P11137 1827 aaKnown RBP22.22■■□□□ 1.15
NDUFA3-204ENST00000391764 SPATA31A1Q5TZJ5 1347 aa22.22■■□□□ 1.15
NDUFA3-204ENST00000391764 MAP3K19Q56UN5 1328 aa22.21■■□□□ 1.15
NDUFA3-204ENST00000391764 CRB1P82279 1406 aa22.21■■□□□ 1.15
NDUFA3-204ENST00000391764 FAM208AQ9UK61 1670 aaKnown RBP22.2■■□□□ 1.15
NDUFA3-204ENST00000391764 FAM98CQ17RN3 349 aaKnown RBP22.2■■□□□ 1.14
NDUFA3-204ENST00000391764 USP35Q9P2H5 1018 aa22.2■■□□□ 1.14
NDUFA3-204ENST00000391764 SOCS7O14512 581 aa22.19■■□□□ 1.14
NDUFA3-204ENST00000391764 RRS1Q15050 365 aaKnown RBP22.19■■□□□ 1.14
NDUFA3-204ENST00000391764 RGPD2P0DJD1 1756 aa22.19■■□□□ 1.14
NDUFA3-204ENST00000391764 BLMP54132 1417 aaPredicted RBP22.18■■□□□ 1.14
NDUFA3-204ENST00000391764 NSD2O96028 1365 aa22.18■■□□□ 1.14
NDUFA3-204ENST00000391764 WDR17Q8IZU2 1322 aa22.18■■□□□ 1.14
NDUFA3-204ENST00000391764 A0A0G2JS52 829 aa22.18■■□□□ 1.14
NDUFA3-204ENST00000391764 MYT1Q01538 1121 aa22.18■■□□□ 1.14
NDUFA3-204ENST00000391764 RTL1A6NKG5 1358 aa22.17■■□□□ 1.14
NDUFA3-204ENST00000391764 KNSTRNQ9Y448 316 aa22.17■■□□□ 1.14
NDUFA3-204ENST00000391764 CSB-PGBD3P0DP91 1061 aa22.16■■□□□ 1.14
NDUFA3-204ENST00000391764 TOM1L2Q6ZVM7 507 aa22.16■■□□□ 1.14
NDUFA3-204ENST00000391764 SEPT12Q8IYM1 358 aa22.16■■□□□ 1.14
NDUFA3-204ENST00000391764 PARP4Q9UKK3 1724 aaKnown RBP22.16■■□□□ 1.14
NDUFA3-204ENST00000391764 ERBB3P21860 1342 aa22.15■■□□□ 1.14
NDUFA3-204ENST00000391764 HOXC9P31274 260 aa22.15■■□□□ 1.14
NDUFA3-204ENST00000391764 AMPHP49418 695 aa22.15■■□□□ 1.14
NDUFA3-204ENST00000391764 LRRC37A3O60309 1634 aa22.15■■□□□ 1.14
NDUFA3-204ENST00000391764 ANKRD24Q8TF21 1146 aa22.14■■□□□ 1.13
NDUFA3-204ENST00000391764 IP6K1Q92551 441 aa22.14■■□□□ 1.13
NDUFA3-204ENST00000391764 ONECUT3O60422 494 aaPredicted RBP22.13■■□□□ 1.13
NDUFA3-204ENST00000391764 TNNT2P45379 298 aaPredicted RBP22.13■■□□□ 1.13
NDUFA3-204ENST00000391764 AMER1Q5JTC6 1135 aaPredicted RBP22.12■■□□□ 1.13
NDUFA3-204ENST00000391764 TCP11L2Q8N4U5 519 aa22.12■■□□□ 1.13
NDUFA3-204ENST00000391764 LTV1Q96GA3 475 aaPredicted RBP22.12■■□□□ 1.13
NDUFA3-204ENST00000391764 EMILIN1Q9Y6C2 1016 aa22.12■■□□□ 1.13
NDUFA3-204ENST00000391764 PER1O15534 1290 aaPredicted RBP22.11■■□□□ 1.13
NDUFA3-204ENST00000391764 FLT4P35916 1363 aa22.11■■□□□ 1.13
NDUFA3-204ENST00000391764 BARGINQ6ZT62 677 aa22.1■■□□□ 1.13
NDUFA3-204ENST00000391764 MORC1Q86VD1 984 aa22.09■■□□□ 1.13
NDUFA3-204ENST00000391764 THRAP3Q9Y2W1 955 aaKnown RBP22.09■■□□□ 1.13
NDUFA3-204ENST00000391764 CNGB1Q14028 1251 aaPredicted RBP22.08■■□□□ 1.13
NDUFA3-204ENST00000391764 CARD10Q9BWT7 1032 aa22.08■■□□□ 1.13
NDUFA3-204ENST00000391764 NLRP2Q9NX02 1062 aa22.08■■□□□ 1.13
NDUFA3-204ENST00000391764 PPM1GO15355 546 aaPredicted RBP22.07■■□□□ 1.12
NDUFA3-204ENST00000391764 KIF24Q5T7B8 1368 aa22.07■■□□□ 1.12
NDUFA3-204ENST00000391764 DISP2A7MBM2 1401 aa22.06■■□□□ 1.12
NDUFA3-204ENST00000391764 SMG6Q86US8 1419 aaKnown RBP22.06■■□□□ 1.12
NDUFA3-204ENST00000391764 HSP90AB2PQ58FF8 381 aa22.06■■□□□ 1.12
NDUFA3-204ENST00000391764 CC2D1BQ5T0F9 858 aaKnown RBP22.06■■□□□ 1.12
NDUFA3-204ENST00000391764 KRT27Q7Z3Y8 459 aa22.06■■□□□ 1.12
NDUFA3-204ENST00000391764 INSRP06213 1382 aa22.06■■□□□ 1.12
NDUFA3-204ENST00000391764 POLKQ9UBT6 870 aa22.05■■□□□ 1.12
NDUFA3-204ENST00000391764 EP400Q96L91 3159 aa22.05■■□□□ 1.12
NDUFA3-204ENST00000391764 FAM182BQ5T319 152 aa22.03■■□□□ 1.12
NDUFA3-204ENST00000391764 NPC1L1Q9UHC9 1359 aa22.02■■□□□ 1.12
NDUFA3-204ENST00000391764 UPF1Q92900 1129 aaKnown RBP eCLIP22.01■■□□□ 1.11
NDUFA3-204ENST00000391764 SHANK3Q9BYB0 1731 aa22■■□□□ 1.11
NDUFA3-204ENST00000391764 TNS2Q63HR2 1409 aa21.99■■□□□ 1.11
NDUFA3-204ENST00000391764 USHBP1Q8N6Y0 703 aa21.99■■□□□ 1.11
NDUFA3-204ENST00000391764 RGPD1P0DJD0 1748 aa21.99■■□□□ 1.11
NDUFA3-204ENST00000391764 TNS1Q9HBL0 1735 aaKnown RBP21.98■■□□□ 1.11
NDUFA3-204ENST00000391764 NBPF6Q5VWK0 638 aa21.98■■□□□ 1.11
NDUFA3-204ENST00000391764 NBPF4Q96M43 638 aa21.98■■□□□ 1.11
NDUFA3-204ENST00000391764 MEGF6O75095 1541 aa21.97■■□□□ 1.11
NDUFA3-204ENST00000391764 PDE3BQ13370 1112 aa21.97■■□□□ 1.11
NDUFA3-204ENST00000391764 DDB1Q16531 1140 aa21.97■■□□□ 1.11
NDUFA3-204ENST00000391764 CDCA7Q9BWT1 371 aaPredicted RBP21.97■■□□□ 1.11
NDUFA3-204ENST00000391764 IL2RBP14784 551 aa21.96■■□□□ 1.11
NDUFA3-204ENST00000391764 SBF2Q86WG5 1849 aa21.96■■□□□ 1.11
NDUFA3-204ENST00000391764 DDX10Q13206 875 aaKnown RBP21.95■■□□□ 1.1
NDUFA3-204ENST00000391764 EIF4A2Q14240 407 aaKnown RBP21.94■■□□□ 1.1
NDUFA3-204ENST00000391764 NCAPD2Q15021 1401 aa21.94■■□□□ 1.1
NDUFA3-204ENST00000391764 OVOS2A0A0G2JMS6 1433 aa21.93■■□□□ 1.1
NDUFA3-204ENST00000391764 PKD1L3Q7Z443 1732 aa21.92■■□□□ 1.1
NDUFA3-204ENST00000391764 MTHFSP49914 203 aa21.91■■□□□ 1.1
NDUFA3-204ENST00000391764 EXOC5O00471 708 aa21.9■■□□□ 1.1
NDUFA3-204ENST00000391764 MARCH10Q8NA82 808 aaPredicted RBP21.9■■□□□ 1.1
NDUFA3-204ENST00000391764 EYA1Q99502 592 aa21.9■■□□□ 1.1
NDUFA3-204ENST00000391764 COL3A1P02461 1466 aaPredicted RBP21.89■■□□□ 1.09
NDUFA3-204ENST00000391764 DOT1LQ8TEK3 1739 aa21.88■■□□□ 1.09
NDUFA3-204ENST00000391764 IGSF1Q8N6C5 1336 aa21.87■■□□□ 1.09
NDUFA3-204ENST00000391764 FAM196AQ6ZSG2 479 aa21.87■■□□□ 1.09
NDUFA3-204ENST00000391764 RAPGEF4Q8WZA2 1011 aa21.87■■□□□ 1.09
NDUFA3-204ENST00000391764 NHSQ6T4R5 1651 aa21.86■■□□□ 1.09
NDUFA3-204ENST00000391764 TATP17735 454 aaPredicted RBP21.86■■□□□ 1.09
NDUFA3-204ENST00000391764 PARD3Q8TEW0 1356 aa21.86■■□□□ 1.09
NDUFA3-204ENST00000391764 ZNF316A6NFI3 1004 aaPredicted RBP21.84■■□□□ 1.09
NDUFA3-204ENST00000391764 TRIM37O94972 964 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms