RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 ACDQ96AP0 544 aa4.03□□□□□ -1.76
RNU6-440P-201ENST00000390882 SPINT1O43278 529 aa4.02□□□□□ -1.77
RNU6-440P-201ENST00000390882 MS4A1P11836 297 aa4.02□□□□□ -1.77
RNU6-440P-201ENST00000390882 KCNH2Q12809 1159 aa4.02□□□□□ -1.77
RNU6-440P-201ENST00000390882 RETREG3Q86VR2 466 aa4.02□□□□□ -1.77
RNU6-440P-201ENST00000390882 KRTAP17-1Q9BYP8 105 aa4.02□□□□□ -1.77
RNU6-440P-201ENST00000390882 OIP5O43482 229 aa4.01□□□□□ -1.77
RNU6-440P-201ENST00000390882 FZD5Q13467 585 aa4.01□□□□□ -1.77
RNU6-440P-201ENST00000390882 LAMC2Q13753 1193 aa4.01□□□□□ -1.77
RNU6-440P-201ENST00000390882 HIC1Q14526 733 aa4.01□□□□□ -1.77
RNU6-440P-201ENST00000390882 PTPRNQ16849 979 aa4.01□□□□□ -1.77
RNU6-440P-201ENST00000390882 FOXR1Q6PIV2 292 aa4.01□□□□□ -1.77
RNU6-440P-201ENST00000390882 NLRP7Q8WX94 980 aa4.01□□□□□ -1.77
RNU6-440P-201ENST00000390882 SYMPKQ92797 1274 aaKnown RBP4.01□□□□□ -1.77
RNU6-440P-201ENST00000390882 ARHGEF1Q92888 912 aaKnown RBP4.01□□□□□ -1.77
RNU6-440P-201ENST00000390882 HLA-CQ95604 372 aa4.01□□□□□ -1.77
RNU6-440P-201ENST00000390882 SENP3-EIF4A1A0A087X0R7 540 aa4□□□□□ -1.77
RNU6-440P-201ENST00000390882 PAX4O43316 350 aa4□□□□□ -1.77
RNU6-440P-201ENST00000390882 CD46P15529 392 aa4□□□□□ -1.77
RNU6-440P-201ENST00000390882 GRIN2CQ14957 1233 aa4□□□□□ -1.77
RNU6-440P-201ENST00000390882 GMCL1Q96IK5 515 aa4□□□□□ -1.77
RNU6-440P-201ENST00000390882 EMILIN1Q9Y6C2 1016 aa4□□□□□ -1.77
RNU6-440P-201ENST00000390882 PIK3R2O00459 728 aa3.99□□□□□ -1.77
RNU6-440P-201ENST00000390882 KCNV2Q8TDN2 545 aa3.99□□□□□ -1.77
RNU6-440P-201ENST00000390882 HOXA2O43364 376 aa3.98□□□□□ -1.77
RNU6-440P-201ENST00000390882 CHRNA4P43681 627 aa3.98□□□□□ -1.77
RNU6-440P-201ENST00000390882 RRAGCQ9HB90 399 aa3.98□□□□□ -1.77
RNU6-440P-201ENST00000390882 CUEDC1Q9NWM3 386 aaPredicted RBP3.98□□□□□ -1.77
RNU6-440P-201ENST00000390882 NSFL1CQ9UNZ2 370 aaKnown RBP3.98□□□□□ -1.77
RNU6-440P-201ENST00000390882 GATA4P43694 442 aa3.97□□□□□ -1.77
RNU6-440P-201ENST00000390882 MCTP1Q6DN14 999 aa3.97□□□□□ -1.77
RNU6-440P-201ENST00000390882 Q6ZVU0 165 aa3.97□□□□□ -1.77
RNU6-440P-201ENST00000390882 FOXJ1Q92949 421 aa3.97□□□□□ -1.77
RNU6-440P-201ENST00000390882 GPR25O00155 361 aa3.96□□□□□ -1.78
RNU6-440P-201ENST00000390882 CTSOP43234 321 aaPredicted RBP3.96□□□□□ -1.78
RNU6-440P-201ENST00000390882 GUCA2AQ02747 115 aa3.96□□□□□ -1.78
RNU6-440P-201ENST00000390882 LRP8Q14114 963 aa3.96□□□□□ -1.78
RNU6-440P-201ENST00000390882 RSPO4Q2I0M5 234 aaPredicted RBP3.96□□□□□ -1.78
RNU6-440P-201ENST00000390882 PHOX2BQ99453 314 aa3.96□□□□□ -1.78
RNU6-440P-201ENST00000390882 SUV39H2Q9H5I1 410 aa3.96□□□□□ -1.78
RNU6-440P-201ENST00000390882 MX2P20592 715 aa3.95□□□□□ -1.78
RNU6-440P-201ENST00000390882 NKAPLQ5M9Q1 402 aa3.95□□□□□ -1.78
RNU6-440P-201ENST00000390882 LINC00114Q6XXX2 140 aa3.95□□□□□ -1.78
RNU6-440P-201ENST00000390882 TRIM22Q8IYM9 498 aa3.95□□□□□ -1.78
RNU6-440P-201ENST00000390882 CCDC116Q8IYX3 515 aa3.95□□□□□ -1.78
RNU6-440P-201ENST00000390882 ZNF837Q96EG3 531 aaPredicted RBP3.95□□□□□ -1.78
RNU6-440P-201ENST00000390882 FMNL2Q96PY5 1086 aa3.95□□□□□ -1.78
RNU6-440P-201ENST00000390882 OXCT2Q9BYC2 517 aaPredicted RBP3.95□□□□□ -1.78
RNU6-440P-201ENST00000390882 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
RNU6-440P-201ENST00000390882 SHISA8B8ZZ34 492 aa3.94□□□□□ -1.78
RNU6-440P-201ENST00000390882 GNPATO15228 680 aa3.94□□□□□ -1.78
RNU6-440P-201ENST00000390882 HYAL3O43820 417 aaPredicted RBP3.94□□□□□ -1.78
RNU6-440P-201ENST00000390882 FSHRP23945 695 aa3.94□□□□□ -1.78
RNU6-440P-201ENST00000390882 CBLBQ13191 982 aa3.94□□□□□ -1.78
RNU6-440P-201ENST00000390882 SMYD5Q6GMV2 418 aa3.94□□□□□ -1.78
RNU6-440P-201ENST00000390882 RNF217Q8TC41 542 aa3.94□□□□□ -1.78
RNU6-440P-201ENST00000390882 C6orf229H3BNL8 230 aa3.93□□□□□ -1.78
RNU6-440P-201ENST00000390882 TULP1O00294 542 aaPredicted RBP3.93□□□□□ -1.78
RNU6-440P-201ENST00000390882 GNB5O14775 395 aa3.93□□□□□ -1.78
RNU6-440P-201ENST00000390882 SEMA3EO15041 775 aa3.93□□□□□ -1.78
RNU6-440P-201ENST00000390882 AGERQ15109 404 aa3.93□□□□□ -1.78
RNU6-440P-201ENST00000390882 TRERF1Q96PN7 1200 aa3.93□□□□□ -1.78
RNU6-440P-201ENST00000390882 INSM2Q96T92 566 aaPredicted RBP3.93□□□□□ -1.78
RNU6-440P-201ENST00000390882 POLMQ9NP87 494 aaPredicted RBP3.93□□□□□ -1.78
RNU6-440P-201ENST00000390882 PGPEP1Q9NXJ5 209 aa3.93□□□□□ -1.78
RNU6-440P-201ENST00000390882 NOP53Q9NZM5 478 aaKnown RBP3.93□□□□□ -1.78
RNU6-440P-201ENST00000390882 COL17A1Q9UMD9 1497 aaPredicted RBP3.92□□□□□ -1.78
RNU6-440P-201ENST00000390882 TESPA1A2RU30 521 aaPredicted RBP3.92□□□□□ -1.78
RNU6-440P-201ENST00000390882 DYRK3O43781 588 aa3.92□□□□□ -1.78
RNU6-440P-201ENST00000390882 MAP2K3P46734 347 aa3.92□□□□□ -1.78
RNU6-440P-201ENST00000390882 C4orf48Q5BLP8 95 aa3.92□□□□□ -1.78
RNU6-440P-201ENST00000390882 VASH1Q7L8A9 365 aaPredicted RBP3.92□□□□□ -1.78
RNU6-440P-201ENST00000390882 BPHLQ86WA6 291 aaPredicted RBP3.92□□□□□ -1.78
RNU6-440P-201ENST00000390882 EDARADDQ8WWZ3 215 aa3.92□□□□□ -1.78
RNU6-440P-201ENST00000390882 KRTAP4-5Q9BYR2 181 aa3.92□□□□□ -1.78
RNU6-440P-201ENST00000390882 MAP4K5Q9Y4K4 846 aa3.92□□□□□ -1.78
RNU6-440P-201ENST00000390882 CTHP32929 405 aa3.91□□□□□ -1.78
RNU6-440P-201ENST00000390882 DBN1Q16643 649 aa3.91□□□□□ -1.78
RNU6-440P-201ENST00000390882 PRSS36Q5K4E3 855 aa3.91□□□□□ -1.78
RNU6-440P-201ENST00000390882 PRPF38BQ5VTL8 546 aaKnown RBP3.91□□□□□ -1.78
RNU6-440P-201ENST00000390882 DESI1Q6ICB0 168 aa3.91□□□□□ -1.78
RNU6-440P-201ENST00000390882 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.91□□□□□ -1.78
RNU6-440P-201ENST00000390882 H7C1W4 665 aa3.9□□□□□ -1.79
RNU6-440P-201ENST00000390882 HOXB4P17483 251 aaPredicted RBP3.9□□□□□ -1.79
RNU6-440P-201ENST00000390882 C1orf229Q6ZS94 237 aaPredicted RBP3.9□□□□□ -1.79
RNU6-440P-201ENST00000390882 GTPBP3Q969Y2 492 aaKnown RBP3.9□□□□□ -1.79
RNU6-440P-201ENST00000390882 GDF2Q9UK05 429 aaPredicted RBP3.9□□□□□ -1.79
RNU6-440P-201ENST00000390882 AMPD1P23109 780 aa3.89□□□□□ -1.79
RNU6-440P-201ENST00000390882 RELBQ01201 579 aa3.89□□□□□ -1.79
RNU6-440P-201ENST00000390882 PPP1R26Q5T8A7 1209 aaPredicted RBP3.89□□□□□ -1.79
RNU6-440P-201ENST00000390882 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
RNU6-440P-201ENST00000390882 LYSMD3Q7Z3D4 306 aa3.89□□□□□ -1.79
RNU6-440P-201ENST00000390882 AGBL1Q96MI9 1066 aa3.89□□□□□ -1.79
RNU6-440P-201ENST00000390882 FDX1P10109 184 aa3.88□□□□□ -1.79
RNU6-440P-201ENST00000390882 TPRNQ4KMQ1 711 aa3.88□□□□□ -1.79
RNU6-440P-201ENST00000390882 RIPOR1Q6ZS17 1223 aa3.88□□□□□ -1.79
RNU6-440P-201ENST00000390882 PRR7Q8TB68 274 aa3.88□□□□□ -1.79
RNU6-440P-201ENST00000390882 C1QTNF2Q9BXJ5 285 aa3.88□□□□□ -1.79
RNU6-440P-201ENST00000390882 ZNF395Q9H8N7 513 aaPredicted RBP3.88□□□□□ -1.79
RNU6-440P-201ENST00000390882 TPSG1Q9NRR2 321 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms