RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 ST20-MTHFSA0A0A6YYL1 179 aa19.13■□□□□ 0.65
TRBV4-1-201ENST00000390357 EN1Q05925 392 aaPredicted RBP19.13■□□□□ 0.65
TRBV4-1-201ENST00000390357 AXIN2Q9Y2T1 843 aa19.13■□□□□ 0.65
TRBV4-1-201ENST00000390357 PARP4Q9UKK3 1724 aaKnown RBP19.12■□□□□ 0.65
TRBV4-1-201ENST00000390357 PARD3Q8TEW0 1356 aa19.12■□□□□ 0.65
TRBV4-1-201ENST00000390357 TRIM37O94972 964 aa19.12■□□□□ 0.65
TRBV4-1-201ENST00000390357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.12■□□□□ 0.65
TRBV4-1-201ENST00000390357 TESK2Q96S53 571 aa19.12■□□□□ 0.65
TRBV4-1-201ENST00000390357 CARD10Q9BWT7 1032 aa19.12■□□□□ 0.65
TRBV4-1-201ENST00000390357 ABCC6O95255 1503 aa19.11■□□□□ 0.65
TRBV4-1-201ENST00000390357 EDC4Q6P2E9 1401 aaKnown RBP19.11■□□□□ 0.65
TRBV4-1-201ENST00000390357 DDB1Q16531 1140 aa19.11■□□□□ 0.65
TRBV4-1-201ENST00000390357 APBA3O96018 575 aa19.1■□□□□ 0.65
TRBV4-1-201ENST00000390357 CSB-PGBD3P0DP91 1061 aa19.1■□□□□ 0.65
TRBV4-1-201ENST00000390357 USP54Q70EL1 1684 aa19.1■□□□□ 0.65
TRBV4-1-201ENST00000390357 CD163L1Q9NR16 1453 aa19.09■□□□□ 0.65
TRBV4-1-201ENST00000390357 TMF1P82094 1093 aa19.09■□□□□ 0.65
TRBV4-1-201ENST00000390357 CDCA8Q53HL2 280 aa19.09■□□□□ 0.65
TRBV4-1-201ENST00000390357 CAMKK2Q96RR4 588 aa19.08■□□□□ 0.64
TRBV4-1-201ENST00000390357 RGPD5Q99666 1765 aa19.08■□□□□ 0.64
TRBV4-1-201ENST00000390357 TNS1Q9HBL0 1735 aaKnown RBP19.08■□□□□ 0.64
TRBV4-1-201ENST00000390357 SOX12O15370 315 aa19.07■□□□□ 0.64
TRBV4-1-201ENST00000390357 NME9Q86XW9 330 aa19.07■□□□□ 0.64
TRBV4-1-201ENST00000390357 CCDC7Q96M83 1385 aa19.06■□□□□ 0.64
TRBV4-1-201ENST00000390357 NFAT5O94916 1531 aa19.06■□□□□ 0.64
TRBV4-1-201ENST00000390357 EXOC5O00471 708 aa19.06■□□□□ 0.64
TRBV4-1-201ENST00000390357 EZH2Q15910 746 aaKnown RBP19.06■□□□□ 0.64
TRBV4-1-201ENST00000390357 OVOS2A0A0G2JMS6 1433 aa19.05■□□□□ 0.64
TRBV4-1-201ENST00000390357 OVOS2A0A0J9YW53 1432 aa19.05■□□□□ 0.64
TRBV4-1-201ENST00000390357 OVOS2Q6IE36 1432 aa19.05■□□□□ 0.64
TRBV4-1-201ENST00000390357 A0A1W2PP64 1363 aa19.05■□□□□ 0.64
TRBV4-1-201ENST00000390357 NBPF14Q5TI25 921 aa19.04■□□□□ 0.64
TRBV4-1-201ENST00000390357 BCL9O00512 1426 aa19.03■□□□□ 0.64
TRBV4-1-201ENST00000390357 PLSCR1O15162 318 aa19.03■□□□□ 0.64
TRBV4-1-201ENST00000390357 COG3Q96JB2 828 aa19.02■□□□□ 0.64
TRBV4-1-201ENST00000390357 USP47Q96K76 1375 aa19.02■□□□□ 0.64
TRBV4-1-201ENST00000390357 BCL11BQ9C0K0 894 aaPredicted RBP19.01■□□□□ 0.63
TRBV4-1-201ENST00000390357 ANKRD36BQ8N2N9 1353 aa19.01■□□□□ 0.63
TRBV4-1-201ENST00000390357 LTN1O94822 1766 aa19.01■□□□□ 0.63
TRBV4-1-201ENST00000390357 ERBB3P21860 1342 aa19■□□□□ 0.63
TRBV4-1-201ENST00000390357 WNK3Q9BYP7 1800 aa19■□□□□ 0.63
TRBV4-1-201ENST00000390357 IP6K1Q92551 441 aa19■□□□□ 0.63
TRBV4-1-201ENST00000390357 SBF2Q86WG5 1849 aa19■□□□□ 0.63
TRBV4-1-201ENST00000390357 PSDA5PKW4 1024 aaPredicted RBP18.99■□□□□ 0.63
TRBV4-1-201ENST00000390357 PCGF6Q9BYE7 350 aa18.99■□□□□ 0.63
TRBV4-1-201ENST00000390357 LRRC37A3O60309 1634 aa18.99■□□□□ 0.63
TRBV4-1-201ENST00000390357 PEAK1Q9H792 1746 aa18.98■□□□□ 0.63
TRBV4-1-201ENST00000390357 R3HDM1Q15032 1099 aaKnown RBP18.98■□□□□ 0.63
TRBV4-1-201ENST00000390357 MARCH10Q8NA82 808 aaPredicted RBP18.98■□□□□ 0.63
TRBV4-1-201ENST00000390357 NLRP2Q9NX02 1062 aa18.98■□□□□ 0.63
TRBV4-1-201ENST00000390357 LRP5O75197 1615 aa18.97■□□□□ 0.63
TRBV4-1-201ENST00000390357 IL2RBP14784 551 aa18.97■□□□□ 0.63
TRBV4-1-201ENST00000390357 ANKRD24Q8TF21 1146 aa18.97■□□□□ 0.63
TRBV4-1-201ENST00000390357 RREB1Q92766 1687 aa18.95■□□□□ 0.62
TRBV4-1-201ENST00000390357 RGPD3A6NKT7 1758 aaPredicted RBP18.95■□□□□ 0.62
TRBV4-1-201ENST00000390357 RGPD4Q7Z3J3 1758 aa18.95■□□□□ 0.62
TRBV4-1-201ENST00000390357 FYB1O15117 783 aa18.93■□□□□ 0.62
TRBV4-1-201ENST00000390357 AMPHP49418 695 aa18.93■□□□□ 0.62
TRBV4-1-201ENST00000390357 FAM208AQ9UK61 1670 aaKnown RBP18.92■□□□□ 0.62
TRBV4-1-201ENST00000390357 TNS2Q63HR2 1409 aa18.91■□□□□ 0.62
TRBV4-1-201ENST00000390357 HOXC9P31274 260 aa18.9■□□□□ 0.62
TRBV4-1-201ENST00000390357 NUP188Q5SRE5 1749 aa18.9■□□□□ 0.62
TRBV4-1-201ENST00000390357 MAP3K19Q56UN5 1328 aa18.9■□□□□ 0.62
TRBV4-1-201ENST00000390357 RTL1A6NKG5 1358 aa18.88■□□□□ 0.61
TRBV4-1-201ENST00000390357 KIF24Q5T7B8 1368 aa18.88■□□□□ 0.61
TRBV4-1-201ENST00000390357 SRCAPQ6ZRS2 3230 aa18.87■□□□□ 0.61
TRBV4-1-201ENST00000390357 GGNBP2Q9H3C7 697 aa18.87■□□□□ 0.61
TRBV4-1-201ENST00000390357 CCER1Q8TC90 406 aaPredicted RBP18.86■□□□□ 0.61
TRBV4-1-201ENST00000390357 LTV1Q96GA3 475 aaPredicted RBP18.86■□□□□ 0.61
TRBV4-1-201ENST00000390357 CGNL1Q0VF96 1302 aa18.85■□□□□ 0.61
TRBV4-1-201ENST00000390357 EIF4G2P78344 907 aaKnown RBP eCLIP18.85■□□□□ 0.61
TRBV4-1-201ENST00000390357 PROM2Q8N271 834 aa18.85■□□□□ 0.61
TRBV4-1-201ENST00000390357 KAT6BQ8WYB5 2073 aa18.85■□□□□ 0.61
TRBV4-1-201ENST00000390357 TXNRD1Q16881 649 aa18.84■□□□□ 0.61
TRBV4-1-201ENST00000390357 SPON1Q9HCB6 807 aa18.84■□□□□ 0.61
TRBV4-1-201ENST00000390357 PTF1AQ7RTS3 328 aa18.83■□□□□ 0.6
TRBV4-1-201ENST00000390357 CARD14Q9BXL6 1004 aa18.83■□□□□ 0.6
TRBV4-1-201ENST00000390357 KIF20BQ96Q89 1820 aa18.83■□□□□ 0.6
TRBV4-1-201ENST00000390357 SMG6Q86US8 1419 aaKnown RBP18.83■□□□□ 0.6
TRBV4-1-201ENST00000390357 KCNQ2O43526 872 aa18.82■□□□□ 0.6
TRBV4-1-201ENST00000390357 FBLN1P23142 703 aa18.82■□□□□ 0.6
TRBV4-1-201ENST00000390357 NHSQ6T4R5 1651 aa18.82■□□□□ 0.6
TRBV4-1-201ENST00000390357 RRS1Q15050 365 aaKnown RBP18.81■□□□□ 0.6
TRBV4-1-201ENST00000390357 ZCRB1Q8TBF4 217 aaKnown RBP18.81■□□□□ 0.6
TRBV4-1-201ENST00000390357 DDX54Q8TDD1 881 aaKnown RBP18.81■□□□□ 0.6
TRBV4-1-201ENST00000390357 STK32BQ9NY57 414 aa18.81■□□□□ 0.6
TRBV4-1-201ENST00000390357 INSRP06213 1382 aa18.81■□□□□ 0.6
TRBV4-1-201ENST00000390357 HMGB2P26583 209 aaKnown RBP18.8■□□□□ 0.6
TRBV4-1-201ENST00000390357 ACSBG1Q96GR2 724 aa18.8■□□□□ 0.6
TRBV4-1-201ENST00000390357 FLT4P35916 1363 aa18.8■□□□□ 0.6
TRBV4-1-201ENST00000390357 NBPF6Q5VWK0 638 aa18.79■□□□□ 0.6
TRBV4-1-201ENST00000390357 RAPGEF4Q8WZA2 1011 aa18.79■□□□□ 0.6
TRBV4-1-201ENST00000390357 NBPF4Q96M43 638 aa18.79■□□□□ 0.6
TRBV4-1-201ENST00000390357 SLC15A2Q16348 729 aa18.78■□□□□ 0.6
TRBV4-1-201ENST00000390357 MYOM1P52179 1685 aa18.78■□□□□ 0.6
TRBV4-1-201ENST00000390357 NSD3Q9BZ95 1437 aa18.77■□□□□ 0.6
TRBV4-1-201ENST00000390357 HSP90AB2PQ58FF8 381 aa18.77■□□□□ 0.6
TRBV4-1-201ENST00000390357 RGPD2P0DJD1 1756 aa18.76■□□□□ 0.59
TRBV4-1-201ENST00000390357 TATP17735 454 aaPredicted RBP18.76■□□□□ 0.59
TRBV4-1-201ENST00000390357 SLC27A3Q5K4L6 730 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms