RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 PPP4R3BQ5MIZ7 849 aa-0.33□□□□□ -2.46
RNU6-1340P-201ENST00000384438 ACDQ96AP0 544 aa-0.33□□□□□ -2.46
RNU6-1340P-201ENST00000384438 EGFL7Q9UHF1 273 aa-0.33□□□□□ -2.46
RNU6-1340P-201ENST00000384438 G3V3G9 751 aa-0.34□□□□□ -2.46
RNU6-1340P-201ENST00000384438 SPINK2P20155 84 aa-0.34□□□□□ -2.46
RNU6-1340P-201ENST00000384438 GAS6Q14393 721 aa-0.34□□□□□ -2.46
RNU6-1340P-201ENST00000384438 ZNF362Q5T0B9 420 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-1340P-201ENST00000384438 DCAF8Q5TAQ9 597 aa-0.34□□□□□ -2.46
RNU6-1340P-201ENST00000384438 SHISA4Q96DD7 197 aa-0.34□□□□□ -2.46
RNU6-1340P-201ENST00000384438 CARMIL2Q6F5E8 1435 aa-0.35□□□□□ -2.47
RNU6-1340P-201ENST00000384438 RBAK-RBAKDNI3L0D1 243 aa-0.35□□□□□ -2.47
RNU6-1340P-201ENST00000384438 OIP5O43482 229 aa-0.35□□□□□ -2.47
RNU6-1340P-201ENST00000384438 NFIXQ14938 502 aa-0.35□□□□□ -2.47
RNU6-1340P-201ENST00000384438 SPATS1Q496A3 300 aa-0.35□□□□□ -2.47
RNU6-1340P-201ENST00000384438 PAPD7Q5XG87 772 aaKnown RBP-0.35□□□□□ -2.47
RNU6-1340P-201ENST00000384438 ZFPM1Q8IX07 1006 aa-0.35□□□□□ -2.47
RNU6-1340P-201ENST00000384438 ABI1Q8IZP0 508 aa-0.35□□□□□ -2.47
RNU6-1340P-201ENST00000384438 SEMA6CQ9H3T2 930 aa-0.35□□□□□ -2.47
RNU6-1340P-201ENST00000384438 PARD6AQ9NPB6 346 aa-0.35□□□□□ -2.47
RNU6-1340P-201ENST00000384438 SPRR5A0A1B0GTR4 108 aa-0.36□□□□□ -2.47
RNU6-1340P-201ENST00000384438 FCHSD2O94868 740 aa-0.36□□□□□ -2.47
RNU6-1340P-201ENST00000384438 SLC34A2O95436 690 aa-0.36□□□□□ -2.47
RNU6-1340P-201ENST00000384438 WNT11O96014 354 aa-0.36□□□□□ -2.47
RNU6-1340P-201ENST00000384438 CELA3BP08861 270 aa-0.36□□□□□ -2.47
RNU6-1340P-201ENST00000384438 ZNF76P36508 570 aa-0.36□□□□□ -2.47
RNU6-1340P-201ENST00000384438 MKRN3Q13064 507 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1340P-201ENST00000384438 ZBTB8BQ8NAP8 495 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1340P-201ENST00000384438 WBP1Q96G27 269 aa-0.36□□□□□ -2.47
RNU6-1340P-201ENST00000384438 SLC38A3Q99624 504 aa-0.36□□□□□ -2.47
RNU6-1340P-201ENST00000384438 RTEL1Q9NZ71 1219 aa-0.36□□□□□ -2.47
RNU6-1340P-201ENST00000384438 RABGEF1Q9UJ41 708 aa-0.36□□□□□ -2.47
RNU6-1340P-201ENST00000384438 SHISA8B8ZZ34 492 aa-0.37□□□□□ -2.47
RNU6-1340P-201ENST00000384438 GNB5O14775 395 aa-0.37□□□□□ -2.47
RNU6-1340P-201ENST00000384438 CAPN5O15484 640 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1340P-201ENST00000384438 TSPAN15O95858 294 aa-0.37□□□□□ -2.47
RNU6-1340P-201ENST00000384438 INHBEP58166 350 aa-0.37□□□□□ -2.47
RNU6-1340P-201ENST00000384438 Q8N1X5 172 aa-0.37□□□□□ -2.47
RNU6-1340P-201ENST00000384438 VWA5B2Q8N398 1253 aa-0.37□□□□□ -2.47
RNU6-1340P-201ENST00000384438 FAM84AQ96KN4 292 aa-0.37□□□□□ -2.47
RNU6-1340P-201ENST00000384438 PDGFDQ9GZP0 370 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1340P-201ENST00000384438 CDKN2AIPQ9NXV6 580 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1340P-201ENST00000384438 PITPNM2Q9BZ72 1349 aa-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 ZPR1O75312 459 aa-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 PAPLNO95428 1278 aa-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 GDF5P43026 501 aa-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 RPIAP49247 311 aa-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 NANOS3P60323 173 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 PPP4CP60510 307 aa-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 TMEM132AQ24JP5 1023 aa-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 SLC51AQ86UW1 340 aa-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 SCUBE3Q8IX30 993 aa-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 ZSCAN10Q96SZ4 725 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 PCED1AQ9H1Q7 454 aa-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 METTL14Q9HCE5 456 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 NOP53Q9NZM5 478 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1340P-201ENST00000384438 IGF1RP08069 1367 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 ANKRD33BA6NCL7 494 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 INO80B-WBP1J3KQ70 363 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 WNT7AO00755 349 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 IKBKBO14920 756 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 ADAM11O75078 769 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 HOXB6P17509 224 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 MAPK7Q13164 816 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 CBLBQ13191 982 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 UBAP2LQ14157 1087 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 EPHA10Q5JZY3 1008 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 GIGYF2Q6Y7W6 1299 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 RNF19BQ6ZMZ0 732 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 SV2AQ7L0J3 742 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 DTX1Q86Y01 620 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 TRIM41Q8WV44 630 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 WBP2Q969T9 261 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 HHIPQ96QV1 700 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 GPR20Q99678 358 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 INO80BQ9C086 356 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 CNTNAP4Q9C0A0 1308 aa-0.39□□□□□ -2.47
RNU6-1340P-201ENST00000384438 A0A1W2PNU3 283 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 C2orf72A6NCS6 295 aa-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 PIK3R2O00459 728 aa-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 MAN1A2O60476 641 aa-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 SPATA31C1P0DKV0 1188 aa-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 AZU1P20160 251 aa-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 PURAQ00577 322 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 COL19A1Q14993 1142 aa-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 FOXD4L5Q5VV16 416 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 ANKLE2Q86XL3 938 aa-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 C9orf106Q8NAJ2 232 aa-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 FOXD4L4Q8WXT5 416 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 FUBP1Q96AE4 644 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 LRCH3Q96II8 777 aa-0.4□□□□□ -2.47
RNU6-1340P-201ENST00000384438 CD2BP2O95400 341 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1340P-201ENST00000384438 KRT1P04264 644 aa-0.41□□□□□ -2.48
RNU6-1340P-201ENST00000384438 HNRNPA3P51991 378 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1340P-201ENST00000384438 FBLN2P98095 1184 aa-0.41□□□□□ -2.48
RNU6-1340P-201ENST00000384438 MRPL14Q6P1L8 145 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1340P-201ENST00000384438 C1orf229Q6ZS94 237 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1340P-201ENST00000384438 CERKQ8TCT0 537 aa-0.41□□□□□ -2.48
RNU6-1340P-201ENST00000384438 BBC3Q96PG8 261 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1340P-201ENST00000384438 PURBQ96QR8 312 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1340P-201ENST00000384438 TESQ9UGI8 421 aaKnown RBP-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms