RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 MAPK8IP3Q9UPT6 1336 aa11.68□□□□□ -0.54
RNU1-28P-201ENST00000383861 UBAP1LF5GYI3 381 aa11.68□□□□□ -0.54
RNU1-28P-201ENST00000383861 HSP90AB2PQ58FF8 381 aa11.68□□□□□ -0.54
RNU1-28P-201ENST00000383861 ROBO1Q9Y6N7 1651 aa11.68□□□□□ -0.54
RNU1-28P-201ENST00000383861 PHRF1Q9P1Y6 1649 aaKnown RBP11.68□□□□□ -0.54
RNU1-28P-201ENST00000383861 ABCC6O95255 1503 aa11.67□□□□□ -0.54
RNU1-28P-201ENST00000383861 HAP1P54257 671 aaPredicted RBP11.67□□□□□ -0.54
RNU1-28P-201ENST00000383861 CPDO75976 1380 aa11.67□□□□□ -0.54
RNU1-28P-201ENST00000383861 APAF1O14727 1248 aa11.66□□□□□ -0.54
RNU1-28P-201ENST00000383861 CCDC27Q2M243 656 aa11.66□□□□□ -0.54
RNU1-28P-201ENST00000383861 CCDC146Q8IYE0 955 aa11.66□□□□□ -0.54
RNU1-28P-201ENST00000383861 PLEKHF1Q96S99 279 aa11.66□□□□□ -0.54
RNU1-28P-201ENST00000383861 PEAK1Q9H792 1746 aa11.66□□□□□ -0.54
RNU1-28P-201ENST00000383861 TCP11L2Q8N4U5 519 aa11.65□□□□□ -0.54
RNU1-28P-201ENST00000383861 RSPH6AQ9H0K4 717 aa11.65□□□□□ -0.54
RNU1-28P-201ENST00000383861 IGSF1Q8N6C5 1336 aa11.64□□□□□ -0.55
RNU1-28P-201ENST00000383861 ZBTB7CA1YPR0 619 aa11.64□□□□□ -0.55
RNU1-28P-201ENST00000383861 PRKAR2BP31323 418 aa11.64□□□□□ -0.55
RNU1-28P-201ENST00000383861 ZC3H6P61129 1189 aaKnown RBP11.64□□□□□ -0.55
RNU1-28P-201ENST00000383861 PIP4K2BP78356 416 aa11.64□□□□□ -0.55
RNU1-28P-201ENST00000383861 SULT6B1Q6IMI4 303 aa11.64□□□□□ -0.55
RNU1-28P-201ENST00000383861 LTN1O94822 1766 aa11.63□□□□□ -0.55
RNU1-28P-201ENST00000383861 PLEKHG5O94827 1062 aa11.62□□□□□ -0.55
RNU1-28P-201ENST00000383861 HMOX1P09601 288 aa11.62□□□□□ -0.55
RNU1-28P-201ENST00000383861 TMPOP42166 694 aaKnown RBP11.62□□□□□ -0.55
RNU1-28P-201ENST00000383861 GOLGA2Q08379 1002 aa11.62□□□□□ -0.55
RNU1-28P-201ENST00000383861 LMOD3Q0VAK6 560 aa11.62□□□□□ -0.55
RNU1-28P-201ENST00000383861 WDR63Q8IWG1 891 aa11.62□□□□□ -0.55
RNU1-28P-201ENST00000383861 CABLES1Q8TDN4 633 aa11.62□□□□□ -0.55
RNU1-28P-201ENST00000383861 ANKRD24Q8TF21 1146 aa11.62□□□□□ -0.55
RNU1-28P-201ENST00000383861 EYA1Q99502 592 aa11.62□□□□□ -0.55
RNU1-28P-201ENST00000383861 PRDM11Q9NQV5 511 aa11.62□□□□□ -0.55
RNU1-28P-201ENST00000383861 KDRP35968 1356 aa11.62□□□□□ -0.55
RNU1-28P-201ENST00000383861 CALD1Q05682 793 aaKnown RBP11.61□□□□□ -0.55
RNU1-28P-201ENST00000383861 NFE2L2Q16236 605 aa11.61□□□□□ -0.55
RNU1-28P-201ENST00000383861 LTV1Q96GA3 475 aaPredicted RBP11.61□□□□□ -0.55
RNU1-28P-201ENST00000383861 SALL2Q9Y467 1007 aaPredicted RBP11.61□□□□□ -0.55
RNU1-28P-201ENST00000383861 KIAA0232Q92628 1395 aa11.61□□□□□ -0.55
RNU1-28P-201ENST00000383861 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
RNU1-28P-201ENST00000383861 PHLPP1O60346 1717 aa11.6□□□□□ -0.55
RNU1-28P-201ENST00000383861 RGPD1P0DJD0 1748 aa11.6□□□□□ -0.55
RNU1-28P-201ENST00000383861 CRYBG1Q9Y4K1 1723 aa11.6□□□□□ -0.55
RNU1-28P-201ENST00000383861 WWC1Q8IX03 1113 aa11.6□□□□□ -0.55
RNU1-28P-201ENST00000383861 PHF23Q9BUL5 403 aaPredicted RBP11.6□□□□□ -0.55
RNU1-28P-201ENST00000383861 COL22A1Q8NFW1 1626 aaPredicted RBP11.6□□□□□ -0.55
RNU1-28P-201ENST00000383861 PLEKHG2Q9H7P9 1386 aa11.59□□□□□ -0.55
RNU1-28P-201ENST00000383861 E9PSI1 815 aa11.59□□□□□ -0.55
RNU1-28P-201ENST00000383861 RIPK4P57078 832 aa11.59□□□□□ -0.55
RNU1-28P-201ENST00000383861 GAS2L2Q8NHY3 880 aa11.59□□□□□ -0.55
RNU1-28P-201ENST00000383861 ERBB3P21860 1342 aa11.59□□□□□ -0.55
RNU1-28P-201ENST00000383861 COL16A1Q07092 1604 aaPredicted RBP11.58□□□□□ -0.56
RNU1-28P-201ENST00000383861 CSB-PGBD3P0DP91 1061 aa11.58□□□□□ -0.56
RNU1-28P-201ENST00000383861 NEUROD2Q15784 382 aa11.58□□□□□ -0.56
RNU1-28P-201ENST00000383861 AXIN2Q9Y2T1 843 aa11.58□□□□□ -0.56
RNU1-28P-201ENST00000383861 IL16Q14005 1332 aa11.58□□□□□ -0.56
RNU1-28P-201ENST00000383861 HTATSF1O43719 755 aaKnown RBP11.57□□□□□ -0.56
RNU1-28P-201ENST00000383861 CHRNA2Q15822 529 aa11.57□□□□□ -0.56
RNU1-28P-201ENST00000383861 AMOTQ4VCS5 1084 aa11.57□□□□□ -0.56
RNU1-28P-201ENST00000383861 NBPF6Q5VWK0 638 aa11.57□□□□□ -0.56
RNU1-28P-201ENST00000383861 AEBP1Q8IUX7 1158 aa11.57□□□□□ -0.56
RNU1-28P-201ENST00000383861 PHACTR3Q96KR7 559 aa11.57□□□□□ -0.56
RNU1-28P-201ENST00000383861 NBPF4Q96M43 638 aa11.57□□□□□ -0.56
RNU1-28P-201ENST00000383861 RRP7AQ9Y3A4 280 aaKnown RBP11.57□□□□□ -0.56
RNU1-28P-201ENST00000383861 NCAPD2Q15021 1401 aa11.57□□□□□ -0.56
RNU1-28P-201ENST00000383861 JCADQ9P266 1359 aa11.56□□□□□ -0.56
RNU1-28P-201ENST00000383861 EVA1CP58658 441 aa11.56□□□□□ -0.56
RNU1-28P-201ENST00000383861 SLFN5Q08AF3 891 aa11.56□□□□□ -0.56
RNU1-28P-201ENST00000383861 ABCA3Q99758 1704 aa11.56□□□□□ -0.56
RNU1-28P-201ENST00000383861 MYH16Q9H6N6 1097 aa11.56□□□□□ -0.56
RNU1-28P-201ENST00000383861 COL18A1P39060 1754 aa11.56□□□□□ -0.56
RNU1-28P-201ENST00000383861 FAM208AQ9UK61 1670 aaKnown RBP11.55□□□□□ -0.56
RNU1-28P-201ENST00000383861 PLEKHO1Q53GL0 409 aaPredicted RBP11.55□□□□□ -0.56
RNU1-28P-201ENST00000383861 RTF1Q92541 710 aaKnown RBP11.55□□□□□ -0.56
RNU1-28P-201ENST00000383861 NLRP2Q9NX02 1062 aa11.55□□□□□ -0.56
RNU1-28P-201ENST00000383861 TRIM35Q9UPQ4 493 aa11.55□□□□□ -0.56
RNU1-28P-201ENST00000383861 SPATA31A6Q5VVP1 1343 aa11.55□□□□□ -0.56
RNU1-28P-201ENST00000383861 WDR17Q8IZU2 1322 aa11.55□□□□□ -0.56
RNU1-28P-201ENST00000383861 SENP3-EIF4A1A0A087X0R7 540 aa11.54□□□□□ -0.56
RNU1-28P-201ENST00000383861 FAM83GA6ND36 823 aa11.54□□□□□ -0.56
RNU1-28P-201ENST00000383861 TRMT2AQ8IZ69 625 aaKnown RBP11.54□□□□□ -0.56
RNU1-28P-201ENST00000383861 RAPGEF4Q8WZA2 1011 aa11.54□□□□□ -0.56
RNU1-28P-201ENST00000383861 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.54□□□□□ -0.56
RNU1-28P-201ENST00000383861 CAMTA1Q9Y6Y1 1673 aa11.54□□□□□ -0.56
RNU1-28P-201ENST00000383861 LMO7Q8WWI1 1683 aa11.53□□□□□ -0.56
RNU1-28P-201ENST00000383861 COL5A2P05997 1499 aaPredicted RBP11.53□□□□□ -0.56
RNU1-28P-201ENST00000383861 TATP17735 454 aaPredicted RBP11.53□□□□□ -0.56
RNU1-28P-201ENST00000383861 TOM1L2Q6ZVM7 507 aa11.53□□□□□ -0.56
RNU1-28P-201ENST00000383861 CDCA7LQ96GN5 454 aa11.53□□□□□ -0.56
RNU1-28P-201ENST00000383861 CARD10Q9BWT7 1032 aa11.53□□□□□ -0.56
RNU1-28P-201ENST00000383861 COL14A1Q05707 1796 aaKnown RBP11.53□□□□□ -0.56
RNU1-28P-201ENST00000383861 GNAT3A8MTJ3 354 aa11.52□□□□□ -0.57
RNU1-28P-201ENST00000383861 MTHFSDQ2M296 383 aaKnown RBP11.52□□□□□ -0.57
RNU1-28P-201ENST00000383861 DUSP27Q5VZP5 1158 aa11.52□□□□□ -0.57
RNU1-28P-201ENST00000383861 USHBP1Q8N6Y0 703 aa11.52□□□□□ -0.57
RNU1-28P-201ENST00000383861 SPG7Q9UQ90 795 aa11.52□□□□□ -0.57
RNU1-28P-201ENST00000383861 CT47B1P0C2W7 299 aaPredicted RBP11.51□□□□□ -0.57
RNU1-28P-201ENST00000383861 GNAI1P63096 354 aa11.51□□□□□ -0.57
RNU1-28P-201ENST00000383861 IFT57Q9NWB7 429 aa11.51□□□□□ -0.57
RNU1-28P-201ENST00000383861 BTG4Q9NY30 223 aa11.51□□□□□ -0.57
RNU1-28P-201ENST00000383861 AKAP4Q5JQC9 854 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms