RNA–Protein interactions for RNA: ENST00000381346.8

RDH11-201, Transcript of retinol dehydrogenase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDH11, Length 2,588 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-201ENST00000381346 RBM25P49756 843 aaKnown RBP11.25□□□□□ -0.61
RDH11-201ENST00000381346 MORC1Q86VD1 984 aa11.25□□□□□ -0.61
RDH11-201ENST00000381346 STK26Q9P289 416 aa11.25□□□□□ -0.61
RDH11-201ENST00000381346 NCOA3Q9Y6Q9 1424 aa11.25□□□□□ -0.61
RDH11-201ENST00000381346 RAB3GAP1Q15042 981 aa11.25□□□□□ -0.61
RDH11-201ENST00000381346 NGEFQ8N5V2 710 aa11.25□□□□□ -0.61
RDH11-201ENST00000381346 HMGN5P82970 282 aaKnown RBP11.24□□□□□ -0.61
RDH11-201ENST00000381346 PRIMPOLQ96LW4 560 aa11.24□□□□□ -0.61
RDH11-201ENST00000381346 CABP2Q9NPB3 220 aa11.24□□□□□ -0.61
RDH11-201ENST00000381346 CCDC39Q9UFE4 941 aa11.24□□□□□ -0.61
RDH11-201ENST00000381346 ATAD2Q6PL18 1390 aa11.24□□□□□ -0.61
RDH11-201ENST00000381346 DLC1Q96QB1 1528 aa11.24□□□□□ -0.61
RDH11-201ENST00000381346 SHPRHQ149N8 1683 aa11.24□□□□□ -0.61
RDH11-201ENST00000381346 SETD1AO15047 1707 aaKnown RBP11.24□□□□□ -0.61
RDH11-201ENST00000381346 ZNF445P59923 1031 aa11.24□□□□□ -0.61
RDH11-201ENST00000381346 KLHL40Q2TBA0 621 aa11.24□□□□□ -0.61
RDH11-201ENST00000381346 SMC5Q8IY18 1101 aa11.24□□□□□ -0.61
RDH11-201ENST00000381346 CLUAP1Q96AJ1 413 aa11.24□□□□□ -0.61
RDH11-201ENST00000381346 RIMS2Q9UQ26 1411 aa11.24□□□□□ -0.61
RDH11-201ENST00000381346 MLECQ14165 292 aa11.23□□□□□ -0.61
RDH11-201ENST00000381346 PDE3AQ14432 1141 aa11.23□□□□□ -0.61
RDH11-201ENST00000381346 PMFBP1Q8TBY8 1022 aa11.23□□□□□ -0.61
RDH11-201ENST00000381346 PRAM1Q96QH2 718 aa11.23□□□□□ -0.61
RDH11-201ENST00000381346 CGNQ9P2M7 1197 aaKnown RBP11.23□□□□□ -0.61
RDH11-201ENST00000381346 SAFB2Q14151 953 aaKnown RBP eCLIP11.23□□□□□ -0.61
RDH11-201ENST00000381346 ABCC11Q96J66 1382 aa11.23□□□□□ -0.61
RDH11-201ENST00000381346 SLC20A2Q08357 652 aa11.23□□□□□ -0.61
RDH11-201ENST00000381346 TEX2Q8IWB9 1127 aa11.23□□□□□ -0.61
RDH11-201ENST00000381346 SNX21Q969T3 373 aa11.23□□□□□ -0.61
RDH11-201ENST00000381346 GTF2F1P35269 517 aaKnown RBP eCLIP11.22□□□□□ -0.61
RDH11-201ENST00000381346 ATP2B3Q16720 1220 aa11.22□□□□□ -0.61
RDH11-201ENST00000381346 CCDC146Q8IYE0 955 aa11.22□□□□□ -0.61
RDH11-201ENST00000381346 A0A1W2PP64 1363 aa11.22□□□□□ -0.61
RDH11-201ENST00000381346 APAF1O14727 1248 aa11.22□□□□□ -0.61
RDH11-201ENST00000381346 HSP90AB1P08238 724 aaKnown RBP11.22□□□□□ -0.61
RDH11-201ENST00000381346 SRPK2P78362 688 aaKnown RBP11.22□□□□□ -0.61
RDH11-201ENST00000381346 DDX49Q9Y6V7 483 aaKnown RBP11.22□□□□□ -0.61
RDH11-201ENST00000381346 SLFN5Q08AF3 891 aa11.21□□□□□ -0.61
RDH11-201ENST00000381346 TRMT2AQ8IZ69 625 aaKnown RBP11.21□□□□□ -0.61
RDH11-201ENST00000381346 ZNF710Q8N1W2 664 aa11.21□□□□□ -0.61
RDH11-201ENST00000381346 DNAJC2Q99543 621 aaKnown RBP11.21□□□□□ -0.61
RDH11-201ENST00000381346 MINK1Q8N4C8 1332 aaPredicted RBP11.21□□□□□ -0.62
RDH11-201ENST00000381346 ESF1Q9H501 851 aaKnown RBP11.21□□□□□ -0.62
RDH11-201ENST00000381346 NRXN3Q9Y4C0 1643 aa11.2□□□□□ -0.62
RDH11-201ENST00000381346 ZNF771Q7L3S4 317 aaPredicted RBP11.2□□□□□ -0.62
RDH11-201ENST00000381346 ANKRD26Q9UPS8 1709 aa11.2□□□□□ -0.62
RDH11-201ENST00000381346 MED14O60244 1454 aa11.2□□□□□ -0.62
RDH11-201ENST00000381346 CD163L1Q9NR16 1453 aa11.2□□□□□ -0.62
RDH11-201ENST00000381346 KIAA2012Q0VF49 1180 aa11.2□□□□□ -0.62
RDH11-201ENST00000381346 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.2□□□□□ -0.62
RDH11-201ENST00000381346 ZFP91Q96JP5 570 aaPredicted RBP11.2□□□□□ -0.62
RDH11-201ENST00000381346 TERF2IPQ9NYB0 399 aa11.2□□□□□ -0.62
RDH11-201ENST00000381346 CHRM1P11229 460 aaPredicted RBP11.19□□□□□ -0.62
RDH11-201ENST00000381346 MTHFSP49914 203 aa11.19□□□□□ -0.62
RDH11-201ENST00000381346 IRX3P78415 501 aaPredicted RBP11.19□□□□□ -0.62
RDH11-201ENST00000381346 CLEC17AQ6ZS10 378 aa11.19□□□□□ -0.62
RDH11-201ENST00000381346 CFAP53Q96M91 514 aa11.19□□□□□ -0.62
RDH11-201ENST00000381346 MFAP1P55081 439 aaKnown RBP11.19□□□□□ -0.62
RDH11-201ENST00000381346 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
RDH11-201ENST00000381346 PDZRN3Q9UPQ7 1066 aa11.19□□□□□ -0.62
RDH11-201ENST00000381346 IRX5P78411 483 aaPredicted RBP11.18□□□□□ -0.62
RDH11-201ENST00000381346 KIF3AQ9Y496 699 aa11.18□□□□□ -0.62
RDH11-201ENST00000381346 TNRQ92752 1358 aa11.18□□□□□ -0.62
RDH11-201ENST00000381346 E9PSI1 815 aa11.18□□□□□ -0.62
RDH11-201ENST00000381346 ZBTB22O15209 634 aa11.18□□□□□ -0.62
RDH11-201ENST00000381346 BCAR3O75815 825 aa11.18□□□□□ -0.62
RDH11-201ENST00000381346 PDCL2Q8N4E4 241 aa11.18□□□□□ -0.62
RDH11-201ENST00000381346 RBSNQ9H1K0 784 aa11.18□□□□□ -0.62
RDH11-201ENST00000381346 NKTRP30414 1462 aaKnown RBP11.18□□□□□ -0.62
RDH11-201ENST00000381346 IQSEC2Q5JU85 1478 aa11.18□□□□□ -0.62
RDH11-201ENST00000381346 FEZ1Q99689 392 aa11.17□□□□□ -0.62
RDH11-201ENST00000381346 CDK19Q9BWU1 502 aa11.17□□□□□ -0.62
RDH11-201ENST00000381346 KNDC1Q76NI1 1749 aa11.17□□□□□ -0.62
RDH11-201ENST00000381346 CCDC66A2RUB6 948 aa11.17□□□□□ -0.62
RDH11-201ENST00000381346 RUNDC1Q96C34 613 aa11.17□□□□□ -0.62
RDH11-201ENST00000381346 HDGFP51858 240 aaKnown RBP11.16□□□□□ -0.62
RDH11-201ENST00000381346 GABPB1Q06547 395 aaPredicted RBP11.16□□□□□ -0.62
RDH11-201ENST00000381346 RWDD1Q9H446 243 aaPredicted RBP11.16□□□□□ -0.62
RDH11-201ENST00000381346 UBR1Q8IWV7 1749 aa11.16□□□□□ -0.62
RDH11-201ENST00000381346 KCNJ4P48050 445 aa11.16□□□□□ -0.62
RDH11-201ENST00000381346 ZSCAN23Q3MJ62 389 aa11.16□□□□□ -0.62
RDH11-201ENST00000381346 HDGFL2Q7Z4V5 671 aaPredicted RBP11.16□□□□□ -0.62
RDH11-201ENST00000381346 ATP7BP35670 1465 aa11.15□□□□□ -0.62
RDH11-201ENST00000381346 KIF20BQ96Q89 1820 aa11.15□□□□□ -0.62
RDH11-201ENST00000381346 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
RDH11-201ENST00000381346 NCBP3Q53F19 620 aaKnown RBP11.15□□□□□ -0.62
RDH11-201ENST00000381346 SPINK5Q9NQ38 1064 aaPredicted RBP11.15□□□□□ -0.62
RDH11-201ENST00000381346 COG6Q9Y2V7 657 aa11.15□□□□□ -0.62
RDH11-201ENST00000381346 TECPR2O15040 1411 aa11.15□□□□□ -0.63
RDH11-201ENST00000381346 FYB1O15117 783 aa11.15□□□□□ -0.63
RDH11-201ENST00000381346 WWC1Q8IX03 1113 aa11.15□□□□□ -0.63
RDH11-201ENST00000381346 PHF23Q9BUL5 403 aaPredicted RBP11.15□□□□□ -0.63
RDH11-201ENST00000381346 METP08581 1390 aa11.14□□□□□ -0.63
RDH11-201ENST00000381346 BAG4O95429 457 aaKnown RBP11.14□□□□□ -0.63
RDH11-201ENST00000381346 WAPLQ7Z5K2 1190 aa11.14□□□□□ -0.63
RDH11-201ENST00000381346 TMEM2Q9UHN6 1383 aa11.14□□□□□ -0.63
RDH11-201ENST00000381346 FAM135BQ49AJ0 1406 aa11.14□□□□□ -0.63
RDH11-201ENST00000381346 BRD2P25440 801 aaKnown RBP11.14□□□□□ -0.63
RDH11-201ENST00000381346 SIRT1Q96EB6 747 aa11.14□□□□□ -0.63
RDH11-201ENST00000381346 GGNBP2Q9H3C7 697 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms