RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 RGPD1P0DJD0 1748 aa33.5■■■□□ 2.95
CDKN2A-203ENST00000380151 CLSPNQ9HAW4 1339 aa33.5■■■□□ 2.95
CDKN2A-203ENST00000380151 NINLQ9Y2I6 1382 aa33.48■■■□□ 2.95
CDKN2A-203ENST00000380151 BAG6P46379 1132 aa33.48■■■□□ 2.95
CDKN2A-203ENST00000380151 PDE3BQ13370 1112 aa33.47■■■□□ 2.95
CDKN2A-203ENST00000380151 TOM1L2Q6ZVM7 507 aa33.47■■■□□ 2.95
CDKN2A-203ENST00000380151 WDR17Q8IZU2 1322 aa33.47■■■□□ 2.95
CDKN2A-203ENST00000380151 TNS1Q9HBL0 1735 aaKnown RBP33.46■■■□□ 2.95
CDKN2A-203ENST00000380151 PARP4Q9UKK3 1724 aaKnown RBP33.46■■■□□ 2.95
CDKN2A-203ENST00000380151 SLC24A1O60721 1099 aa33.46■■■□□ 2.95
CDKN2A-203ENST00000380151 RGPD5Q99666 1765 aa33.45■■■□□ 2.95
CDKN2A-203ENST00000380151 FAM196AQ6ZSG2 479 aa33.44■■■□□ 2.94
CDKN2A-203ENST00000380151 TIMELESSQ9UNS1 1208 aa33.44■■■□□ 2.94
CDKN2A-203ENST00000380151 ABCC6O95255 1503 aa33.43■■■□□ 2.94
CDKN2A-203ENST00000380151 TMF1P82094 1093 aa33.41■■■□□ 2.94
CDKN2A-203ENST00000380151 OVOS2A0A0J9YW53 1432 aa33.41■■■□□ 2.94
CDKN2A-203ENST00000380151 OVOS2Q6IE36 1432 aa33.41■■■□□ 2.94
CDKN2A-203ENST00000380151 LRRC37A3O60309 1634 aa33.4■■■□□ 2.94
CDKN2A-203ENST00000380151 TRIM37O94972 964 aa33.4■■■□□ 2.94
CDKN2A-203ENST00000380151 CSB-PGBD3P0DP91 1061 aa33.4■■■□□ 2.94
CDKN2A-203ENST00000380151 EN1Q05925 392 aaPredicted RBP33.39■■■□□ 2.94
CDKN2A-203ENST00000380151 WNK3Q9BYP7 1800 aa33.39■■■□□ 2.94
CDKN2A-203ENST00000380151 DISP2A7MBM2 1401 aa33.38■■■□□ 2.93
CDKN2A-203ENST00000380151 LTN1O94822 1766 aa33.37■■■□□ 2.93
CDKN2A-203ENST00000380151 ANKRD36BQ8N2N9 1353 aa33.36■■■□□ 2.93
CDKN2A-203ENST00000380151 CARD10Q9BWT7 1032 aa33.34■■■□□ 2.93
CDKN2A-203ENST00000380151 SRCAPQ6ZRS2 3230 aa33.34■■■□□ 2.93
CDKN2A-203ENST00000380151 DDB1Q16531 1140 aa33.32■■■□□ 2.92
CDKN2A-203ENST00000380151 OVOS2A0A0G2JMS6 1433 aa33.31■■■□□ 2.92
CDKN2A-203ENST00000380151 CCER1Q8TC90 406 aaPredicted RBP33.31■■■□□ 2.92
CDKN2A-203ENST00000380151 ERBB3P21860 1342 aa33.3■■■□□ 2.92
CDKN2A-203ENST00000380151 PEAK1Q9H792 1746 aa33.3■■■□□ 2.92
CDKN2A-203ENST00000380151 APBA3O96018 575 aa33.29■■■□□ 2.92
CDKN2A-203ENST00000380151 EZH2Q15910 746 aaKnown RBP33.28■■■□□ 2.92
CDKN2A-203ENST00000380151 CDCA7Q9BWT1 371 aaPredicted RBP33.28■■■□□ 2.92
CDKN2A-203ENST00000380151 CCDC7Q96M83 1385 aa33.28■■■□□ 2.92
CDKN2A-203ENST00000380151 CDCA8Q53HL2 280 aa33.27■■■□□ 2.92
CDKN2A-203ENST00000380151 COG3Q96JB2 828 aa33.27■■■□□ 2.92
CDKN2A-203ENST00000380151 CAMKK2Q96RR4 588 aa33.25■■■□□ 2.91
CDKN2A-203ENST00000380151 PSDA5PKW4 1024 aaPredicted RBP33.24■■■□□ 2.91
CDKN2A-203ENST00000380151 ANKRD24Q8TF21 1146 aa33.24■■■□□ 2.91
CDKN2A-203ENST00000380151 NLRP2Q9NX02 1062 aa33.24■■■□□ 2.91
CDKN2A-203ENST00000380151 MYOM1P52179 1685 aa33.23■■■□□ 2.91
CDKN2A-203ENST00000380151 C11orf95C9JLR9 678 aaPredicted RBP33.22■■■□□ 2.91
CDKN2A-203ENST00000380151 MARCH10Q8NA82 808 aaPredicted RBP33.21■■■□□ 2.91
CDKN2A-203ENST00000380151 PARD3Q8TEW0 1356 aa33.21■■■□□ 2.91
CDKN2A-203ENST00000380151 TNS2Q63HR2 1409 aa33.19■■■□□ 2.9
CDKN2A-203ENST00000380151 MAP3K19Q56UN5 1328 aa33.19■■■□□ 2.9
CDKN2A-203ENST00000380151 FBLN1P23142 703 aa33.18■■■□□ 2.9
CDKN2A-203ENST00000380151 IP6K1Q92551 441 aa33.18■■■□□ 2.9
CDKN2A-203ENST00000380151 GGNBP2Q9H3C7 697 aa33.18■■■□□ 2.9
CDKN2A-203ENST00000380151 RREB1Q92766 1687 aa33.17■■■□□ 2.9
CDKN2A-203ENST00000380151 SBF2Q86WG5 1849 aa33.17■■■□□ 2.9
CDKN2A-203ENST00000380151 FYB1O15117 783 aa33.17■■■□□ 2.9
CDKN2A-203ENST00000380151 EXOC5O00471 708 aa33.15■■■□□ 2.9
CDKN2A-203ENST00000380151 LTV1Q96GA3 475 aaPredicted RBP33.15■■■□□ 2.9
CDKN2A-203ENST00000380151 KIF20BQ96Q89 1820 aa33.14■■■□□ 2.9
CDKN2A-203ENST00000380151 R3HDM1Q15032 1099 aaKnown RBP33.14■■■□□ 2.9
CDKN2A-203ENST00000380151 BCL9O00512 1426 aa33.13■■■□□ 2.89
CDKN2A-203ENST00000380151 NUP188Q5SRE5 1749 aa33.13■■■□□ 2.89
CDKN2A-203ENST00000380151 IL2RBP14784 551 aa33.12■■■□□ 2.89
CDKN2A-203ENST00000380151 HOXC9P31274 260 aa33.12■■■□□ 2.89
CDKN2A-203ENST00000380151 AMPHP49418 695 aa33.12■■■□□ 2.89
CDKN2A-203ENST00000380151 NSD3Q9BZ95 1437 aa33.11■■■□□ 2.89
CDKN2A-203ENST00000380151 FAM208AQ9UK61 1670 aaKnown RBP33.11■■■□□ 2.89
CDKN2A-203ENST00000380151 PTF1AQ7RTS3 328 aa33.11■■■□□ 2.89
CDKN2A-203ENST00000380151 RRS1Q15050 365 aaKnown RBP33.1■■■□□ 2.89
CDKN2A-203ENST00000380151 CARD14Q9BXL6 1004 aa33.1■■■□□ 2.89
CDKN2A-203ENST00000380151 BCL11BQ9C0K0 894 aaPredicted RBP33.09■■■□□ 2.89
CDKN2A-203ENST00000380151 RTL1A6NKG5 1358 aa33.09■■■□□ 2.89
CDKN2A-203ENST00000380151 POLR3GLQ9BT43 218 aa33.08■■■□□ 2.89
CDKN2A-203ENST00000380151 LRP5O75197 1615 aa33.08■■■□□ 2.89
CDKN2A-203ENST00000380151 EIF4G2P78344 907 aaKnown RBP eCLIP33.07■■■□□ 2.88
CDKN2A-203ENST00000380151 HSPA5P11021 654 aaKnown RBP33.06■■■□□ 2.88
CDKN2A-203ENST00000380151 RGPD3A6NKT7 1758 aaPredicted RBP33.06■■■□□ 2.88
CDKN2A-203ENST00000380151 RGPD4Q7Z3J3 1758 aa33.06■■■□□ 2.88
CDKN2A-203ENST00000380151 PLSCR1O15162 318 aa33.01■■■□□ 2.87
CDKN2A-203ENST00000380151 RGPD2P0DJD1 1756 aa33■■■□□ 2.87
CDKN2A-203ENST00000380151 NHSQ6T4R5 1651 aa32.99■■■□□ 2.87
CDKN2A-203ENST00000380151 NBPF14Q5TI25 921 aa32.99■■■□□ 2.87
CDKN2A-203ENST00000380151 KCNQ2O43526 872 aa32.97■■■□□ 2.87
CDKN2A-203ENST00000380151 ACSBG1Q96GR2 724 aa32.97■■■□□ 2.87
CDKN2A-203ENST00000380151 SMG6Q86US8 1419 aaKnown RBP32.96■■■□□ 2.87
CDKN2A-203ENST00000380151 FLT4P35916 1363 aa32.96■■■□□ 2.87
CDKN2A-203ENST00000380151 MEGF6O75095 1541 aa32.94■■■□□ 2.86
CDKN2A-203ENST00000380151 CGNL1Q0VF96 1302 aa32.94■■■□□ 2.86
CDKN2A-203ENST00000380151 HSP90AB2PQ58FF8 381 aa32.93■■■□□ 2.86
CDKN2A-203ENST00000380151 INSRP06213 1382 aa32.93■■■□□ 2.86
CDKN2A-203ENST00000380151 NBPF6Q5VWK0 638 aa32.92■■■□□ 2.86
CDKN2A-203ENST00000380151 USHBP1Q8N6Y0 703 aa32.92■■■□□ 2.86
CDKN2A-203ENST00000380151 DDX54Q8TDD1 881 aaKnown RBP32.92■■■□□ 2.86
CDKN2A-203ENST00000380151 NBPF4Q96M43 638 aa32.92■■■□□ 2.86
CDKN2A-203ENST00000380151 EMILIN1Q9Y6C2 1016 aa32.92■■■□□ 2.86
CDKN2A-203ENST00000380151 KIF24Q5T7B8 1368 aa32.91■■■□□ 2.86
CDKN2A-203ENST00000380151 PROM2Q8N271 834 aa32.9■■■□□ 2.86
CDKN2A-203ENST00000380151 ANO8Q9HCE9 1232 aaPredicted RBP32.9■■■□□ 2.86
CDKN2A-203ENST00000380151 TXNRD1Q16881 649 aa32.87■■■□□ 2.85
CDKN2A-203ENST00000380151 SHANK3Q9BYB0 1731 aa32.87■■■□□ 2.85
CDKN2A-203ENST00000380151 BTAF1O14981 1849 aa32.86■■■□□ 2.85
CDKN2A-203ENST00000380151 ANKRD26Q9UPS8 1709 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms