RNA–Protein interactions for RNA: ENST00000379997.7

C9orf72-202, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2 BASIC

Gene C9orf72, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-202ENST00000379997 CSB-PGBD3P0DP91 1061 aa7.2□□□□□ -1.26
C9orf72-202ENST00000379997 MMP16P51512 607 aa7.2□□□□□ -1.26
C9orf72-202ENST00000379997 KANK4Q5T7N3 995 aaPredicted RBP7.2□□□□□ -1.26
C9orf72-202ENST00000379997 TMEM88BA6NKF7 163 aa7.19□□□□□ -1.26
C9orf72-202ENST00000379997 KCNH2Q12809 1159 aa7.19□□□□□ -1.26
C9orf72-202ENST00000379997 CRIPAKQ8N1N5 446 aa7.19□□□□□ -1.26
C9orf72-202ENST00000379997 CCDC9Q9Y3X0 531 aaKnown RBP7.19□□□□□ -1.26
C9orf72-202ENST00000379997 ATG7O95352 703 aa7.19□□□□□ -1.26
C9orf72-202ENST00000379997 PTCRAQ6ISU1 281 aaPredicted RBP7.19□□□□□ -1.26
C9orf72-202ENST00000379997 DEPDC4Q8N2C3 294 aa7.19□□□□□ -1.26
C9orf72-202ENST00000379997 GZF1Q9H116 711 aaPredicted RBP7.19□□□□□ -1.26
C9orf72-202ENST00000379997 USTQ9Y2C2 406 aa7.19□□□□□ -1.26
C9orf72-202ENST00000379997 ANKLE1Q8NAG6 615 aa7.18□□□□□ -1.26
C9orf72-202ENST00000379997 ZC3H4Q9UPT8 1303 aaKnown RBP7.18□□□□□ -1.26
C9orf72-202ENST00000379997 PPEF1O14829 653 aaPredicted RBP7.17□□□□□ -1.26
C9orf72-202ENST00000379997 AXIN1O15169 862 aa7.17□□□□□ -1.26
C9orf72-202ENST00000379997 SKIP12755 728 aa7.17□□□□□ -1.26
C9orf72-202ENST00000379997 USP17L3A6NCW0 530 aa7.17□□□□□ -1.26
C9orf72-202ENST00000379997 USP17L4A6NCW7 530 aa7.17□□□□□ -1.26
C9orf72-202ENST00000379997 TERTO14746 1132 aaKnown RBP7.17□□□□□ -1.26
C9orf72-202ENST00000379997 USP17L2Q6R6M4 530 aa7.17□□□□□ -1.26
C9orf72-202ENST00000379997 USP17L1Q7RTZ2 530 aa7.17□□□□□ -1.26
C9orf72-202ENST00000379997 ZMIZ1Q9ULJ6 1067 aa7.17□□□□□ -1.26
C9orf72-202ENST00000379997 USP17L5A8MUK1 530 aa7.16□□□□□ -1.26
C9orf72-202ENST00000379997 PDXDC2PQ6P474 469 aa7.16□□□□□ -1.26
C9orf72-202ENST00000379997 STK32AQ8WU08 396 aa7.16□□□□□ -1.26
C9orf72-202ENST00000379997 VRTNQ9H8Y1 702 aa7.16□□□□□ -1.26
C9orf72-202ENST00000379997 CEP126Q9P2H0 1117 aa7.16□□□□□ -1.26
C9orf72-202ENST00000379997 ADH1BP00325 375 aa7.15□□□□□ -1.26
C9orf72-202ENST00000379997 CCDC24Q8N4L8 307 aa7.15□□□□□ -1.26
C9orf72-202ENST00000379997 ADAM32Q8TC27 787 aa7.15□□□□□ -1.26
C9orf72-202ENST00000379997 UNC93B1Q9H1C4 597 aa7.15□□□□□ -1.26
C9orf72-202ENST00000379997 PCDHB9Q9Y5E1 797 aa7.15□□□□□ -1.26
C9orf72-202ENST00000379997 BRD1O95696 1058 aa7.15□□□□□ -1.27
C9orf72-202ENST00000379997 PTK2Q05397 1052 aa7.15□□□□□ -1.27
C9orf72-202ENST00000379997 TSGA10IPQ3SY00 556 aa7.15□□□□□ -1.27
C9orf72-202ENST00000379997 PHTF2Q8N3S3 785 aa7.15□□□□□ -1.27
C9orf72-202ENST00000379997 PDE4CQ08493 712 aa7.14□□□□□ -1.27
C9orf72-202ENST00000379997 FOXC1Q12948 553 aa7.14□□□□□ -1.27
C9orf72-202ENST00000379997 CRTC2Q53ET0 693 aaPredicted RBP7.14□□□□□ -1.27
C9orf72-202ENST00000379997 NPM2Q86SE8 214 aaKnown RBP7.14□□□□□ -1.27
C9orf72-202ENST00000379997 NFATC2IPQ8NCF5 419 aa7.14□□□□□ -1.27
C9orf72-202ENST00000379997 GPSM3Q9Y4H4 160 aa7.14□□□□□ -1.27
C9orf72-202ENST00000379997 NCOA4Q13772 614 aa7.13□□□□□ -1.27
C9orf72-202ENST00000379997 TMEM164Q5U3C3 297 aa7.13□□□□□ -1.27
C9orf72-202ENST00000379997 SH3BP5LQ7L8J4 393 aa7.13□□□□□ -1.27
C9orf72-202ENST00000379997 AVPP01185 164 aa7.13□□□□□ -1.27
C9orf72-202ENST00000379997 NBPF14Q5TI25 921 aa7.13□□□□□ -1.27
C9orf72-202ENST00000379997 PLEKHM2Q8IWE5 1019 aa7.13□□□□□ -1.27
C9orf72-202ENST00000379997 ARMC2Q8NEN0 867 aa7.13□□□□□ -1.27
C9orf72-202ENST00000379997 GPKOWQ92917 476 aaPredicted RBP eCLIP7.13□□□□□ -1.27
C9orf72-202ENST00000379997 ARHGAP9Q9BRR9 750 aa7.13□□□□□ -1.27
C9orf72-202ENST00000379997 SLFNL1Q499Z3 407 aa7.12□□□□□ -1.27
C9orf72-202ENST00000379997 TMCO4Q5TGY1 634 aa7.12□□□□□ -1.27
C9orf72-202ENST00000379997 RNF135Q8IUD6 432 aa7.12□□□□□ -1.27
C9orf72-202ENST00000379997 CARD14Q9BXL6 1004 aa7.12□□□□□ -1.27
C9orf72-202ENST00000379997 MKRN1Q9UHC7 482 aaKnown RBP7.12□□□□□ -1.27
C9orf72-202ENST00000379997 KCNA1Q09470 495 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 PLPP7Q8NBV4 271 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 SLC6A16Q9GZN6 736 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 SLAIN2Q9P270 581 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 NOVA2Q9UNW9 492 aaKnown RBP7.11□□□□□ -1.27
C9orf72-202ENST00000379997 IVNS1ABPQ9Y6Y0 642 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 MAGEB6P1A0A0J9YX57 407 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 S1PR4O95977 384 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 ELOAQ14241 798 aaKnown RBP7.11□□□□□ -1.27
C9orf72-202ENST00000379997 CTC1Q2NKJ3 1217 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 LINC01559Q495D7 138 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 C4orf48Q5BLP8 95 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 SH3RF1Q7Z6J0 888 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 ZSCAN1Q8NBB4 408 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 BAP1Q92560 729 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 PKD2L1Q9P0L9 805 aa7.11□□□□□ -1.27
C9orf72-202ENST00000379997 USP17L15C9J2P7 530 aa7.1□□□□□ -1.27
C9orf72-202ENST00000379997 USP17L10C9JJH3 530 aa7.1□□□□□ -1.27
C9orf72-202ENST00000379997 USP17L13C9JLJ4 530 aa7.1□□□□□ -1.27
C9orf72-202ENST00000379997 USP17L12C9JPN9 530 aa7.1□□□□□ -1.27
C9orf72-202ENST00000379997 USP17L11C9JVI0 530 aa7.1□□□□□ -1.27
C9orf72-202ENST00000379997 USP17L21D6R901 530 aa7.1□□□□□ -1.27
C9orf72-202ENST00000379997 USP17L18D6R9N7 530 aa7.1□□□□□ -1.27
C9orf72-202ENST00000379997 USP17L22D6RA61 530 aa7.1□□□□□ -1.27
C9orf72-202ENST00000379997 USP17L17D6RBQ6 530 aa7.1□□□□□ -1.27
C9orf72-202ENST00000379997 USP17L19D6RCP7 530 aa7.1□□□□□ -1.27
C9orf72-202ENST00000379997 USP17L20D6RJB6 530 aa7.1□□□□□ -1.27
C9orf72-202ENST00000379997 MFAP1P55081 439 aaKnown RBP7.1□□□□□ -1.27
C9orf72-202ENST00000379997 USP17L24Q0WX57 530 aa7.1□□□□□ -1.27
C9orf72-202ENST00000379997 FOXJ1Q92949 421 aa7.1□□□□□ -1.27
C9orf72-202ENST00000379997 SNRPBP14678 240 aaKnown RBP7.09□□□□□ -1.27
C9orf72-202ENST00000379997 PTK7Q13308 1070 aa7.09□□□□□ -1.27
C9orf72-202ENST00000379997 ZBTB33Q86T24 672 aa7.09□□□□□ -1.27
C9orf72-202ENST00000379997 RGS22Q8NE09 1264 aa7.09□□□□□ -1.27
C9orf72-202ENST00000379997 CCDC85AQ96PX6 553 aaPredicted RBP7.09□□□□□ -1.27
C9orf72-202ENST00000379997 CHIC2Q9UKJ5 165 aa7.09□□□□□ -1.27
C9orf72-202ENST00000379997 FAM196BA6NMK8 535 aa7.09□□□□□ -1.28
C9orf72-202ENST00000379997 RASA1P20936 1047 aa7.09□□□□□ -1.28
C9orf72-202ENST00000379997 PHLDB3Q6NSJ2 640 aa7.09□□□□□ -1.28
C9orf72-202ENST00000379997 MTMR7Q9Y216 660 aa7.09□□□□□ -1.28
C9orf72-202ENST00000379997 FCF1Q9Y324 198 aaKnown RBP7.09□□□□□ -1.28
C9orf72-202ENST00000379997 GIGYF1O75420 1035 aaPredicted RBP7.08□□□□□ -1.28
C9orf72-202ENST00000379997 SMCPP49901 116 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms