RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 MIER1Q8N108 512 aa33■■■□□ 2.87
TM6SF1-204ENST00000379390 RTL1A6NKG5 1358 aa32.99■■■□□ 2.87
TM6SF1-204ENST00000379390 FLT4P35916 1363 aa32.99■■■□□ 2.87
TM6SF1-204ENST00000379390 ABCC6O95255 1503 aa32.99■■■□□ 2.87
TM6SF1-204ENST00000379390 FAM83GA6ND36 823 aa32.98■■■□□ 2.87
TM6SF1-204ENST00000379390 HOXC9P31274 260 aa32.97■■■□□ 2.87
TM6SF1-204ENST00000379390 KIF24Q5T7B8 1368 aa32.97■■■□□ 2.87
TM6SF1-204ENST00000379390 CAMTA1Q9Y6Y1 1673 aa32.96■■■□□ 2.87
TM6SF1-204ENST00000379390 IP6K1Q92551 441 aa32.95■■■□□ 2.86
TM6SF1-204ENST00000379390 AXIN2Q9Y2T1 843 aa32.95■■■□□ 2.86
TM6SF1-204ENST00000379390 RGPD2P0DJD1 1756 aa32.94■■■□□ 2.86
TM6SF1-204ENST00000379390 NWD2Q9ULI1 1742 aa32.94■■■□□ 2.86
TM6SF1-204ENST00000379390 HSP90AB2PQ58FF8 381 aa32.94■■■□□ 2.86
TM6SF1-204ENST00000379390 COL3A1P02461 1466 aaPredicted RBP32.93■■■□□ 2.86
TM6SF1-204ENST00000379390 MEX3CQ5U5Q3 659 aaKnown RBP32.93■■■□□ 2.86
TM6SF1-204ENST00000379390 NRAPQ86VF7 1730 aa32.92■■■□□ 2.86
TM6SF1-204ENST00000379390 C8orf37Q96NL8 207 aa32.92■■■□□ 2.86
TM6SF1-204ENST00000379390 BLMP54132 1417 aaPredicted RBP32.92■■■□□ 2.86
TM6SF1-204ENST00000379390 INSRP06213 1382 aa32.91■■■□□ 2.86
TM6SF1-204ENST00000379390 CCDC184Q52MB2 194 aa32.91■■■□□ 2.86
TM6SF1-204ENST00000379390 CFAP53Q96M91 514 aa32.88■■■□□ 2.85
TM6SF1-204ENST00000379390 COL5A2P05997 1499 aaPredicted RBP32.88■■■□□ 2.85
TM6SF1-204ENST00000379390 LTV1Q96GA3 475 aaPredicted RBP32.88■■■□□ 2.85
TM6SF1-204ENST00000379390 BTG4Q9NY30 223 aa32.88■■■□□ 2.85
TM6SF1-204ENST00000379390 NGLY1Q96IV0 654 aa32.87■■■□□ 2.85
TM6SF1-204ENST00000379390 FAM208AQ9UK61 1670 aaKnown RBP32.87■■■□□ 2.85
TM6SF1-204ENST00000379390 SLIT2O94813 1529 aa32.87■■■□□ 2.85
TM6SF1-204ENST00000379390 ANKRD24Q8TF21 1146 aa32.84■■■□□ 2.85
TM6SF1-204ENST00000379390 MRS2Q9HD23 443 aa32.84■■■□□ 2.85
TM6SF1-204ENST00000379390 ERBB3P21860 1342 aa32.84■■■□□ 2.85
TM6SF1-204ENST00000379390 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.83■■■□□ 2.85
TM6SF1-204ENST00000379390 EIF4A2Q14240 407 aaKnown RBP32.83■■■□□ 2.85
TM6SF1-204ENST00000379390 RGPD1P0DJD0 1748 aa32.82■■■□□ 2.85
TM6SF1-204ENST00000379390 STRN4Q9NRL3 753 aa32.82■■■□□ 2.84
TM6SF1-204ENST00000379390 DIAPH1O60610 1272 aaKnown RBP32.8■■■□□ 2.84
TM6SF1-204ENST00000379390 AFF2P51816 1311 aa32.78■■■□□ 2.84
TM6SF1-204ENST00000379390 IL13P35225 146 aa32.78■■■□□ 2.84
TM6SF1-204ENST00000379390 BCL9LQ86UU0 1499 aa32.78■■■□□ 2.84
TM6SF1-204ENST00000379390 CCER2I3L3R5 266 aa32.77■■■□□ 2.84
TM6SF1-204ENST00000379390 CSB-PGBD3P0DP91 1061 aa32.77■■■□□ 2.84
TM6SF1-204ENST00000379390 EVA1CP58658 441 aa32.77■■■□□ 2.84
TM6SF1-204ENST00000379390 FNBP4Q8N3X1 1017 aaPredicted RBP32.77■■■□□ 2.84
TM6SF1-204ENST00000379390 WDR17Q8IZU2 1322 aa32.75■■■□□ 2.83
TM6SF1-204ENST00000379390 LARP1Q6PKG0 1096 aaKnown RBP32.74■■■□□ 2.83
TM6SF1-204ENST00000379390 U2SURPO15042 1029 aaKnown RBP32.73■■■□□ 2.83
TM6SF1-204ENST00000379390 USP21Q9UK80 565 aa32.73■■■□□ 2.83
TM6SF1-204ENST00000379390 UNC5CLQ8IV45 518 aa32.72■■■□□ 2.83
TM6SF1-204ENST00000379390 EYA1Q99502 592 aa32.71■■■□□ 2.83
TM6SF1-204ENST00000379390 NLRP2Q9NX02 1062 aa32.71■■■□□ 2.83
TM6SF1-204ENST00000379390 NBPF6Q5VWK0 638 aa32.7■■■□□ 2.83
TM6SF1-204ENST00000379390 TOM1L2Q6ZVM7 507 aa32.7■■■□□ 2.83
TM6SF1-204ENST00000379390 USHBP1Q8N6Y0 703 aa32.7■■■□□ 2.83
TM6SF1-204ENST00000379390 NBPF4Q96M43 638 aa32.7■■■□□ 2.83
TM6SF1-204ENST00000379390 NUDCQ9Y266 331 aa32.7■■■□□ 2.83
TM6SF1-204ENST00000379390 CRB1P82279 1406 aa32.7■■■□□ 2.83
TM6SF1-204ENST00000379390 WNK3Q9BYP7 1800 aa32.68■■■□□ 2.82
TM6SF1-204ENST00000379390 IGSF1Q8N6C5 1336 aa32.68■■■□□ 2.82
TM6SF1-204ENST00000379390 U2AF1L5P0DN76 240 aaPredicted RBP32.66■■■□□ 2.82
TM6SF1-204ENST00000379390 U2AF1Q01081 240 aaKnown RBP eCLIP32.66■■■□□ 2.822e-7■■■■□ 25.8
TM6SF1-204ENST00000379390 WDR43Q15061 677 aaKnown RBP eCLIP32.66■■■□□ 2.82
TM6SF1-204ENST00000379390 USP35Q9P2H5 1018 aa32.66■■■□□ 2.82
TM6SF1-204ENST00000379390 PNISRQ8TF01 805 aaKnown RBP32.65■■■□□ 2.82
TM6SF1-204ENST00000379390 HMOX1P09601 288 aa32.64■■■□□ 2.82
TM6SF1-204ENST00000379390 AEBP1Q8IUX7 1158 aa32.64■■■□□ 2.82
TM6SF1-204ENST00000379390 CCDC9Q9Y3X0 531 aaKnown RBP32.64■■■□□ 2.82
TM6SF1-204ENST00000379390 NCAPD2Q15021 1401 aa32.64■■■□□ 2.82
TM6SF1-204ENST00000379390 CARD10Q9BWT7 1032 aa32.62■■■□□ 2.81
TM6SF1-204ENST00000379390 SULT6B1Q6IMI4 303 aa32.62■■■□□ 2.81
TM6SF1-204ENST00000379390 ATRNO75882 1429 aa32.61■■■□□ 2.81
TM6SF1-204ENST00000379390 VPS72Q15906 364 aa32.61■■■□□ 2.81
TM6SF1-204ENST00000379390 FAM9BQ8IZU0 186 aa32.61■■■□□ 2.81
TM6SF1-204ENST00000379390 SPATA31A5Q5VU36 1347 aa32.6■■■□□ 2.81
TM6SF1-204ENST00000379390 SPATA31A7Q8IWB4 1347 aa32.6■■■□□ 2.81
TM6SF1-204ENST00000379390 KDRP35968 1356 aa32.59■■■□□ 2.81
TM6SF1-204ENST00000379390 SPATA31A1Q5TZJ5 1347 aa32.59■■■□□ 2.81
TM6SF1-204ENST00000379390 ADAMTS8Q9UP79 889 aa32.59■■■□□ 2.81
TM6SF1-204ENST00000379390 GLI3P10071 1580 aa32.59■■■□□ 2.81
TM6SF1-204ENST00000379390 PARP4Q9UKK3 1724 aaKnown RBP32.59■■■□□ 2.81
TM6SF1-204ENST00000379390 TRPC5Q9UL62 973 aaPredicted RBP32.57■■■□□ 2.8
TM6SF1-204ENST00000379390 PHF23Q9BUL5 403 aaPredicted RBP32.56■■■□□ 2.8
TM6SF1-204ENST00000379390 ZNF772Q68DY9 489 aaPredicted RBP32.55■■■□□ 2.8
TM6SF1-204ENST00000379390 QTRT2Q9H974 415 aaKnown RBP32.55■■■□□ 2.8
TM6SF1-204ENST00000379390 MEGF6O75095 1541 aa32.55■■■□□ 2.8
TM6SF1-204ENST00000379390 RSPH6AQ9H0K4 717 aa32.55■■■□□ 2.8
TM6SF1-204ENST00000379390 TCP11L2Q8N4U5 519 aa32.54■■■□□ 2.8
TM6SF1-204ENST00000379390 RGS17Q9UGC6 210 aaPredicted RBP32.53■■■□□ 2.8
TM6SF1-204ENST00000379390 PRKAR2BP31323 418 aa32.51■■■□□ 2.8
TM6SF1-204ENST00000379390 FCHSD2O94868 740 aa32.51■■■□□ 2.79
TM6SF1-204ENST00000379390 GJD4Q96KN9 370 aaPredicted RBP32.51■■■□□ 2.79
TM6SF1-204ENST00000379390 PKD1L3Q7Z443 1732 aa32.5■■■□□ 2.79
TM6SF1-204ENST00000379390 CCDC146Q8IYE0 955 aa32.5■■■□□ 2.79
TM6SF1-204ENST00000379390 RAPGEF4Q8WZA2 1011 aa32.5■■■□□ 2.79
TM6SF1-204ENST00000379390 DISP2A7MBM2 1401 aa32.49■■■□□ 2.79
TM6SF1-204ENST00000379390 THRAP3Q9Y2W1 955 aaKnown RBP32.48■■■□□ 2.79
TM6SF1-204ENST00000379390 SHANK3Q9BYB0 1731 aa32.48■■■□□ 2.79
TM6SF1-204ENST00000379390 FAM98CQ17RN3 349 aaKnown RBP32.48■■■□□ 2.79
TM6SF1-204ENST00000379390 LRRC37A3O60309 1634 aa32.47■■■□□ 2.79
TM6SF1-204ENST00000379390 IL2RBP14784 551 aa32.47■■■□□ 2.79
TM6SF1-204ENST00000379390 THSD7AQ9UPZ6 1657 aa32.47■■■□□ 2.79
TM6SF1-204ENST00000379390 DLG5Q8TDM6 1919 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms