RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 KIF1BO60333 1816 aa16.86■□□□□ 0.29
KIF3A-201ENST00000378735 MTHFSP49914 203 aa16.86■□□□□ 0.29
KIF3A-201ENST00000378735 MYRIPQ8NFW9 859 aa16.86■□□□□ 0.29
KIF3A-201ENST00000378735 ALDH1L2Q3SY69 923 aa16.85■□□□□ 0.29
KIF3A-201ENST00000378735 KIF13AQ9H1H9 1805 aa16.85■□□□□ 0.29
KIF3A-201ENST00000378735 CDC45O75419 566 aa16.85■□□□□ 0.29
KIF3A-201ENST00000378735 PRIMPOLQ96LW4 560 aa16.85■□□□□ 0.29
KIF3A-201ENST00000378735 CAMSAP1Q5T5Y3 1602 aa16.85■□□□□ 0.29
KIF3A-201ENST00000378735 SETBP1Q9Y6X0 1596 aa16.85■□□□□ 0.29
KIF3A-201ENST00000378735 BRPF1P55201 1214 aaPredicted RBP16.85■□□□□ 0.29
KIF3A-201ENST00000378735 GTPBP4Q9BZE4 634 aaKnown RBP16.85■□□□□ 0.29
KIF3A-201ENST00000378735 IFT172Q9UG01 1749 aa16.85■□□□□ 0.29
KIF3A-201ENST00000378735 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
KIF3A-201ENST00000378735 ZSCAN20P17040 1043 aaPredicted RBP16.83■□□□□ 0.29
KIF3A-201ENST00000378735 GTF2F1P35269 517 aaKnown RBP eCLIP16.83■□□□□ 0.29
KIF3A-201ENST00000378735 HMGN5P82970 282 aaKnown RBP16.83■□□□□ 0.29
KIF3A-201ENST00000378735 PLEKHG5O94827 1062 aa16.83■□□□□ 0.28
KIF3A-201ENST00000378735 KIAA2012Q0VF49 1180 aa16.83■□□□□ 0.28
KIF3A-201ENST00000378735 TSR2Q969E8 191 aaKnown RBP16.83■□□□□ 0.28
KIF3A-201ENST00000378735 ZNF428Q96B54 188 aa16.83■□□□□ 0.28
KIF3A-201ENST00000378735 NRXN1Q9ULB1 1477 aa16.83■□□□□ 0.28
KIF3A-201ENST00000378735 RAPGEF3O95398 923 aa16.83■□□□□ 0.28
KIF3A-201ENST00000378735 TNNT2P45379 298 aaPredicted RBP16.83■□□□□ 0.28
KIF3A-201ENST00000378735 AGLP35573 1532 aa16.82■□□□□ 0.28
KIF3A-201ENST00000378735 KIF20AO95235 890 aa16.82■□□□□ 0.28
KIF3A-201ENST00000378735 MBD3O95983 291 aa16.81■□□□□ 0.28
KIF3A-201ENST00000378735 GPT2Q8TD30 523 aa16.81■□□□□ 0.28
KIF3A-201ENST00000378735 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
KIF3A-201ENST00000378735 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
KIF3A-201ENST00000378735 PPIP5K1Q6PFW1 1433 aa16.81■□□□□ 0.28
KIF3A-201ENST00000378735 ADGRB3O60242 1522 aa16.81■□□□□ 0.28
KIF3A-201ENST00000378735 NPATQ14207 1427 aa16.81■□□□□ 0.28
KIF3A-201ENST00000378735 CFAP70Q5T0N1 1121 aa16.81■□□□□ 0.28
KIF3A-201ENST00000378735 ANKRD45Q5TZF3 282 aa16.81■□□□□ 0.28
KIF3A-201ENST00000378735 PIK3R4Q99570 1358 aa16.8■□□□□ 0.28
KIF3A-201ENST00000378735 PUS7Q96PZ0 661 aaKnown RBP16.8■□□□□ 0.28
KIF3A-201ENST00000378735 PLEKHF1Q96S99 279 aa16.79■□□□□ 0.28
KIF3A-201ENST00000378735 PRPF40AO75400 957 aaKnown RBP16.79■□□□□ 0.28
KIF3A-201ENST00000378735 TMPOP42166 694 aaKnown RBP16.79■□□□□ 0.28
KIF3A-201ENST00000378735 TRIM35Q9UPQ4 493 aa16.79■□□□□ 0.28
KIF3A-201ENST00000378735 TSPOAP1O95153 1857 aa16.79■□□□□ 0.28
KIF3A-201ENST00000378735 PIK3C2BO00750 1634 aa16.78■□□□□ 0.28
KIF3A-201ENST00000378735 QRICH2Q9H0J4 1663 aa16.78■□□□□ 0.28
KIF3A-201ENST00000378735 ARHGAP45Q92619 1136 aa16.78■□□□□ 0.28
KIF3A-201ENST00000378735 TMEM63CQ9P1W3 806 aa16.78■□□□□ 0.28
KIF3A-201ENST00000378735 LETM1O95202 739 aaPredicted RBP16.77■□□□□ 0.28
KIF3A-201ENST00000378735 ZBTB7BO15156 539 aaPredicted RBP16.77■□□□□ 0.27
KIF3A-201ENST00000378735 ZHX1Q9UKY1 873 aaPredicted RBP16.77■□□□□ 0.27
KIF3A-201ENST00000378735 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
KIF3A-201ENST00000378735 ST18O60284 1047 aa16.76■□□□□ 0.27
KIF3A-201ENST00000378735 FGD1P98174 961 aa16.76■□□□□ 0.27
KIF3A-201ENST00000378735 USP26Q9BXU7 913 aa16.76■□□□□ 0.27
KIF3A-201ENST00000378735 PRDM10Q9NQV6 1147 aa16.76■□□□□ 0.27
KIF3A-201ENST00000378735 RBM27Q9P2N5 1060 aaKnown RBP16.76■□□□□ 0.27
KIF3A-201ENST00000378735 MROH2AA6NES4 1674 aa16.75■□□□□ 0.27
KIF3A-201ENST00000378735 SYCE3A1L190 88 aa16.75■□□□□ 0.27
KIF3A-201ENST00000378735 PIBF1Q8WXW3 757 aa16.75■□□□□ 0.27
KIF3A-201ENST00000378735 UVSSAQ2YD98 709 aa16.75■□□□□ 0.27
KIF3A-201ENST00000378735 SLC12A5Q9H2X9 1139 aa16.75■□□□□ 0.27
KIF3A-201ENST00000378735 PTCH1Q13635 1447 aa16.75■□□□□ 0.27
KIF3A-201ENST00000378735 SYAP1Q96A49 352 aaPredicted RBP16.74■□□□□ 0.27
KIF3A-201ENST00000378735 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.74■□□□□ 0.27
KIF3A-201ENST00000378735 ARHGEF40Q8TER5 1519 aa16.74■□□□□ 0.27
KIF3A-201ENST00000378735 ADGRF5Q8IZF2 1346 aa16.74■□□□□ 0.27
KIF3A-201ENST00000378735 PTMAP06454 111 aaKnown RBP16.74■□□□□ 0.27
KIF3A-201ENST00000378735 TSPY26PQ9H489 355 aa16.74■□□□□ 0.27
KIF3A-201ENST00000378735 ZDHHC9Q9Y397 364 aa16.74■□□□□ 0.27
KIF3A-201ENST00000378735 FAM184AQ8NB25 1140 aa16.74■□□□□ 0.27
KIF3A-201ENST00000378735 UGGT1Q9NYU2 1555 aa16.73■□□□□ 0.27
KIF3A-201ENST00000378735 A0A0U1RQG5 324 aaPredicted RBP16.73■□□□□ 0.27
KIF3A-201ENST00000378735 COL3A1P02461 1466 aaPredicted RBP16.73■□□□□ 0.27
KIF3A-201ENST00000378735 SIGLEC1Q9BZZ2 1709 aa16.73■□□□□ 0.27
KIF3A-201ENST00000378735 PKP1Q13835 747 aa16.73■□□□□ 0.27
KIF3A-201ENST00000378735 GGT6Q6P531 493 aa16.73■□□□□ 0.27
KIF3A-201ENST00000378735 ZNF710Q8N1W2 664 aa16.73■□□□□ 0.27
KIF3A-201ENST00000378735 ANKRD36BQ8N2N9 1353 aa16.73■□□□□ 0.27
KIF3A-201ENST00000378735 INTS3Q68E01 1043 aaKnown RBP16.72■□□□□ 0.27
KIF3A-201ENST00000378735 PPLO60437 1756 aa16.72■□□□□ 0.27
KIF3A-201ENST00000378735 RPGRIP1LQ68CZ1 1315 aa16.72■□□□□ 0.27
KIF3A-201ENST00000378735 PHF14O94880 888 aa16.72■□□□□ 0.27
KIF3A-201ENST00000378735 GSPT1P15170 499 aaKnown RBP16.71■□□□□ 0.27
KIF3A-201ENST00000378735 KLHL34Q8N239 644 aa16.71■□□□□ 0.27
KIF3A-201ENST00000378735 DNTTIP2Q5QJE6 756 aaKnown RBP16.71■□□□□ 0.27
KIF3A-201ENST00000378735 SPTLC3Q9NUV7 552 aa16.71■□□□□ 0.27
KIF3A-201ENST00000378735 TAF3Q5VWG9 929 aa16.71■□□□□ 0.26
KIF3A-201ENST00000378735 KIF3AQ9Y496 699 aa16.71■□□□□ 0.26
KIF3A-201ENST00000378735 KIF24Q5T7B8 1368 aa16.7■□□□□ 0.26
KIF3A-201ENST00000378735 NOLC1Q14978 699 aaKnown RBP eCLIP16.7■□□□□ 0.26
KIF3A-201ENST00000378735 TTC22Q5TAA0 569 aa16.7■□□□□ 0.26
KIF3A-201ENST00000378735 PLEKHM2Q8IWE5 1019 aa16.7■□□□□ 0.26
KIF3A-201ENST00000378735 ARID3AQ99856 593 aa16.7■□□□□ 0.26
KIF3A-201ENST00000378735 PREX1Q8TCU6 1659 aa16.69■□□□□ 0.26
KIF3A-201ENST00000378735 SIRT2Q8IXJ6 389 aa16.69■□□□□ 0.26
KIF3A-201ENST00000378735 CASC1Q6TDU7 716 aa16.69■□□□□ 0.26
KIF3A-201ENST00000378735 FKBP5Q13451 457 aaPredicted RBP16.68■□□□□ 0.26
KIF3A-201ENST00000378735 PPP4R3BQ5MIZ7 849 aa16.68■□□□□ 0.26
KIF3A-201ENST00000378735 ZGPATQ8N5A5 531 aaKnown RBP16.68■□□□□ 0.26
KIF3A-201ENST00000378735 ABCC4O15439 1325 aa16.68■□□□□ 0.26
KIF3A-201ENST00000378735 MCM2P49736 904 aa16.67■□□□□ 0.26
KIF3A-201ENST00000378735 ADGRB1O14514 1584 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms