RNA–Protein interactions for RNA: ENST00000378389.5

PRDM16-202, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-202ENST00000378389 R3HDM1Q15032 1099 aaKnown RBP27.48■■□□□ 1.99
PRDM16-202ENST00000378389 ARHGEF25Q86VW2 580 aa27.47■■□□□ 1.99
PRDM16-202ENST00000378389 WDR17Q8IZU2 1322 aa27.46■■□□□ 1.99
PRDM16-202ENST00000378389 KCNH5Q8NCM2 988 aa27.46■■□□□ 1.99
PRDM16-202ENST00000378389 OVOS2A0A0G2JMS6 1433 aa27.46■■□□□ 1.99
PRDM16-202ENST00000378389 OVOS2A0A0J9YW53 1432 aa27.46■■□□□ 1.99
PRDM16-202ENST00000378389 BCL9O00512 1426 aa27.46■■□□□ 1.99
PRDM16-202ENST00000378389 OVOS2Q6IE36 1432 aa27.46■■□□□ 1.99
PRDM16-202ENST00000378389 NEUROD1Q13562 356 aa27.45■■□□□ 1.98
PRDM16-202ENST00000378389 SBF2Q86WG5 1849 aa27.44■■□□□ 1.98
PRDM16-202ENST00000378389 AXIN2Q9Y2T1 843 aa27.44■■□□□ 1.98
PRDM16-202ENST00000378389 USP31Q70CQ4 1352 aa27.42■■□□□ 1.98
PRDM16-202ENST00000378389 CD163L1Q9NR16 1453 aa27.41■■□□□ 1.98
PRDM16-202ENST00000378389 CDCA7Q9BWT1 371 aaPredicted RBP27.41■■□□□ 1.98
PRDM16-202ENST00000378389 KTN1Q86UP2 1357 aaKnown RBP27.4■■□□□ 1.98
PRDM16-202ENST00000378389 RGPD5Q99666 1765 aa27.4■■□□□ 1.98
PRDM16-202ENST00000378389 TOM1L2Q6ZVM7 507 aa27.39■■□□□ 1.98
PRDM16-202ENST00000378389 CARD10Q9BWT7 1032 aa27.38■■□□□ 1.97
PRDM16-202ENST00000378389 DDB1Q16531 1140 aa27.37■■□□□ 1.97
PRDM16-202ENST00000378389 ZBTB7CA1YPR0 619 aa27.36■■□□□ 1.97
PRDM16-202ENST00000378389 PLSCR1O15162 318 aa27.36■■□□□ 1.97
PRDM16-202ENST00000378389 PUS7Q96PZ0 661 aaKnown RBP27.36■■□□□ 1.97
PRDM16-202ENST00000378389 NBPF14Q5TI25 921 aa27.34■■□□□ 1.97
PRDM16-202ENST00000378389 CCDC7Q96M83 1385 aa27.34■■□□□ 1.97
PRDM16-202ENST00000378389 CARD11Q9BXL7 1154 aa27.33■■□□□ 1.97
PRDM16-202ENST00000378389 MARCH10Q8NA82 808 aaPredicted RBP27.32■■□□□ 1.96
PRDM16-202ENST00000378389 BCL11BQ9C0K0 894 aaPredicted RBP27.32■■□□□ 1.96
PRDM16-202ENST00000378389 EDC4Q6P2E9 1401 aaKnown RBP27.3■■□□□ 1.96
PRDM16-202ENST00000378389 TNS2Q63HR2 1409 aa27.28■■□□□ 1.96
PRDM16-202ENST00000378389 TONSLQ96HA7 1378 aa27.26■■□□□ 1.95
PRDM16-202ENST00000378389 ERBB3P21860 1342 aa27.26■■□□□ 1.95
PRDM16-202ENST00000378389 LTN1O94822 1766 aa27.26■■□□□ 1.95
PRDM16-202ENST00000378389 NINLQ9Y2I6 1382 aa27.24■■□□□ 1.95
PRDM16-202ENST00000378389 SOX12O15370 315 aa27.24■■□□□ 1.95
PRDM16-202ENST00000378389 CSB-PGBD3P0DP91 1061 aa27.24■■□□□ 1.95
PRDM16-202ENST00000378389 PTF1AQ7RTS3 328 aa27.24■■□□□ 1.95
PRDM16-202ENST00000378389 NME9Q86XW9 330 aa27.24■■□□□ 1.95
PRDM16-202ENST00000378389 A0A1W2PP64 1363 aa27.23■■□□□ 1.95
PRDM16-202ENST00000378389 CASZ1Q86V15 1759 aa27.23■■□□□ 1.95
PRDM16-202ENST00000378389 HDGFL2Q7Z4V5 671 aaPredicted RBP27.23■■□□□ 1.95
PRDM16-202ENST00000378389 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.23■■□□□ 1.95
PRDM16-202ENST00000378389 SLC12A5Q9H2X9 1139 aa27.23■■□□□ 1.95
PRDM16-202ENST00000378389 EXOC5O00471 708 aa27.21■■□□□ 1.95
PRDM16-202ENST00000378389 PROM2Q8N271 834 aa27.21■■□□□ 1.95
PRDM16-202ENST00000378389 TESK2Q96S53 571 aa27.21■■□□□ 1.95
PRDM16-202ENST00000378389 TERF2IPQ9NYB0 399 aa27.21■■□□□ 1.95
PRDM16-202ENST00000378389 NHSQ6T4R5 1651 aa27.21■■□□□ 1.95
PRDM16-202ENST00000378389 SPON1Q9HCB6 807 aa27.19■■□□□ 1.94
PRDM16-202ENST00000378389 ANO8Q9HCE9 1232 aaPredicted RBP27.19■■□□□ 1.94
PRDM16-202ENST00000378389 KCNQ2O43526 872 aa27.18■■□□□ 1.94
PRDM16-202ENST00000378389 TMC1Q8TDI8 760 aa27.18■■□□□ 1.94
PRDM16-202ENST00000378389 SLC24A1O60721 1099 aa27.17■■□□□ 1.94
PRDM16-202ENST00000378389 FAM208AQ9UK61 1670 aaKnown RBP27.15■■□□□ 1.94
PRDM16-202ENST00000378389 IL2RBP14784 551 aa27.13■■□□□ 1.93
PRDM16-202ENST00000378389 ANKRD24Q8TF21 1146 aa27.13■■□□□ 1.93
PRDM16-202ENST00000378389 TXNRD1Q16881 649 aa27.12■■□□□ 1.93
PRDM16-202ENST00000378389 NLRP2Q9NX02 1062 aa27.11■■□□□ 1.93
PRDM16-202ENST00000378389 ST20-MTHFSA0A0A6YYL1 179 aa27.1■■□□□ 1.93
PRDM16-202ENST00000378389 IP6K1Q92551 441 aa27.1■■□□□ 1.93
PRDM16-202ENST00000378389 PAPPAQ13219 1627 aa27.09■■□□□ 1.93
PRDM16-202ENST00000378389 ANKRD36BQ8N2N9 1353 aa27.07■■□□□ 1.92
PRDM16-202ENST00000378389 BTAF1O14981 1849 aa27.06■■□□□ 1.92
PRDM16-202ENST00000378389 SLC15A2Q16348 729 aa27.04■■□□□ 1.92
PRDM16-202ENST00000378389 PPP1R1BQ9UD71 204 aaPredicted RBP27.04■■□□□ 1.92
PRDM16-202ENST00000378389 PDGFDQ9GZP0 370 aaPredicted RBP27.03■■□□□ 1.92
PRDM16-202ENST00000378389 STK32BQ9NY57 414 aa27.03■■□□□ 1.92
PRDM16-202ENST00000378389 MAP3K19Q56UN5 1328 aa27.02■■□□□ 1.92
PRDM16-202ENST00000378389 PTGER2P43116 358 aa27.02■■□□□ 1.92
PRDM16-202ENST00000378389 RTL1A6NKG5 1358 aa27.01■■□□□ 1.91
PRDM16-202ENST00000378389 COG3Q96JB2 828 aa27.01■■□□□ 1.91
PRDM16-202ENST00000378389 MYOM1P52179 1685 aa26.99■■□□□ 1.91
PRDM16-202ENST00000378389 HOXC9P31274 260 aa26.99■■□□□ 1.91
PRDM16-202ENST00000378389 ACSBG1Q96GR2 724 aa26.99■■□□□ 1.91
PRDM16-202ENST00000378389 USP47Q96K76 1375 aa26.98■■□□□ 1.91
PRDM16-202ENST00000378389 SHANK3Q9BYB0 1731 aa26.97■■□□□ 1.91
PRDM16-202ENST00000378389 TRIM26Q12899 539 aaPredicted RBP26.96■■□□□ 1.91
PRDM16-202ENST00000378389 SGIP1Q9BQI5 828 aa26.96■■□□□ 1.91
PRDM16-202ENST00000378389 ZBTB7AO95365 584 aa26.95■■□□□ 1.9
PRDM16-202ENST00000378389 MTFR1LQ9H019 292 aa26.95■■□□□ 1.9
PRDM16-202ENST00000378389 QSER1Q2KHR3 1735 aa26.95■■□□□ 1.9
PRDM16-202ENST00000378389 TMF1P82094 1093 aa26.94■■□□□ 1.9
PRDM16-202ENST00000378389 RGPD2P0DJD1 1756 aa26.94■■□□□ 1.9
PRDM16-202ENST00000378389 KAT6BQ8WYB5 2073 aa26.93■■□□□ 1.9
PRDM16-202ENST00000378389 FYB1O15117 783 aa26.93■■□□□ 1.9
PRDM16-202ENST00000378389 MEGF6O75095 1541 aa26.91■■□□□ 1.9
PRDM16-202ENST00000378389 AMPHP49418 695 aa26.91■■□□□ 1.9
PRDM16-202ENST00000378389 SLC27A3Q5K4L6 730 aa26.91■■□□□ 1.9
PRDM16-202ENST00000378389 LRRC4BQ9NT99 713 aa26.91■■□□□ 1.9
PRDM16-202ENST00000378389 KIF24Q5T7B8 1368 aa26.91■■□□□ 1.9
PRDM16-202ENST00000378389 LTV1Q96GA3 475 aaPredicted RBP26.9■■□□□ 1.9
PRDM16-202ENST00000378389 COL24A1Q17RW2 1714 aa26.9■■□□□ 1.9
PRDM16-202ENST00000378389 DOT1LQ8TEK3 1739 aa26.9■■□□□ 1.9
PRDM16-202ENST00000378389 NSD2O96028 1365 aa26.89■■□□□ 1.9
PRDM16-202ENST00000378389 MAP3K5Q99683 1374 aa26.89■■□□□ 1.9
PRDM16-202ENST00000378389 KIF20BQ96Q89 1820 aa26.89■■□□□ 1.9
PRDM16-202ENST00000378389 FBLN1P23142 703 aa26.89■■□□□ 1.9
PRDM16-202ENST00000378389 CDCA8Q53HL2 280 aa26.89■■□□□ 1.9
PRDM16-202ENST00000378389 LY75O60449 1722 aa26.89■■□□□ 1.9
PRDM16-202ENST00000378389 CGNL1Q0VF96 1302 aa26.89■■□□□ 1.89
PRDM16-202ENST00000378389 YY1P25490 414 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms