RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 U2AF1L5P0DN76 240 aaPredicted RBP18.77■□□□□ 0.6
TPM2-204ENST00000378300 U2AF1Q01081 240 aaKnown RBP eCLIP18.77■□□□□ 0.6
TPM2-204ENST00000378300 EIF4A2Q14240 407 aaKnown RBP18.77■□□□□ 0.6
TPM2-204ENST00000378300 ARHGEF25Q86VW2 580 aa18.77■□□□□ 0.6
TPM2-204ENST00000378300 BLMP54132 1417 aaPredicted RBP18.77■□□□□ 0.59
TPM2-204ENST00000378300 LRRC59Q96AG4 307 aaKnown RBP18.76■□□□□ 0.59
TPM2-204ENST00000378300 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
TPM2-204ENST00000378300 COL16A1Q07092 1604 aaPredicted RBP18.75■□□□□ 0.59
TPM2-204ENST00000378300 KIF24Q5T7B8 1368 aa18.74■□□□□ 0.59
TPM2-204ENST00000378300 IP6K1Q92551 441 aa18.73■□□□□ 0.59
TPM2-204ENST00000378300 ABCA3Q99758 1704 aa18.73■□□□□ 0.59
TPM2-204ENST00000378300 RTL1A6NKG5 1358 aa18.73■□□□□ 0.59
TPM2-204ENST00000378300 AXIN2Q9Y2T1 843 aa18.73■□□□□ 0.59
TPM2-204ENST00000378300 LTV1Q96GA3 475 aaPredicted RBP18.72■□□□□ 0.59
TPM2-204ENST00000378300 HMOX1P09601 288 aa18.71■□□□□ 0.59
TPM2-204ENST00000378300 SALL2Q9Y467 1007 aaPredicted RBP18.71■□□□□ 0.59
TPM2-204ENST00000378300 KIAA0232Q92628 1395 aa18.71■□□□□ 0.59
TPM2-204ENST00000378300 CHRNA2Q15822 529 aa18.7■□□□□ 0.58
TPM2-204ENST00000378300 RGPD1P0DJD0 1748 aa18.69■□□□□ 0.58
TPM2-204ENST00000378300 RGPD5Q99666 1765 aa18.69■□□□□ 0.58
TPM2-204ENST00000378300 HAP1P54257 671 aaPredicted RBP18.69■□□□□ 0.58
TPM2-204ENST00000378300 APAF1O14727 1248 aa18.68■□□□□ 0.58
TPM2-204ENST00000378300 CPDO75976 1380 aa18.68■□□□□ 0.58
TPM2-204ENST00000378300 COL18A1P39060 1754 aa18.68■□□□□ 0.58
TPM2-204ENST00000378300 AEBP1Q8IUX7 1158 aa18.68■□□□□ 0.58
TPM2-204ENST00000378300 PLEKHF1Q96S99 279 aa18.68■□□□□ 0.58
TPM2-204ENST00000378300 RSPH6AQ9H0K4 717 aa18.68■□□□□ 0.58
TPM2-204ENST00000378300 COL22A1Q8NFW1 1626 aaPredicted RBP18.68■□□□□ 0.58
TPM2-204ENST00000378300 EYA1Q99502 592 aa18.68■□□□□ 0.58
TPM2-204ENST00000378300 RUNDC1Q96C34 613 aa18.67■□□□□ 0.58
TPM2-204ENST00000378300 ZBED9Q6R2W3 1325 aa18.66■□□□□ 0.58
TPM2-204ENST00000378300 FCHSD2O94868 740 aa18.66■□□□□ 0.58
TPM2-204ENST00000378300 PRKAR2BP31323 418 aa18.66■□□□□ 0.58
TPM2-204ENST00000378300 SULT6B1Q6IMI4 303 aa18.66■□□□□ 0.58
TPM2-204ENST00000378300 PRDM11Q9NQV5 511 aa18.65■□□□□ 0.58
TPM2-204ENST00000378300 IGSF1Q8N6C5 1336 aa18.65■□□□□ 0.58
TPM2-204ENST00000378300 TCP11L2Q8N4U5 519 aa18.65■□□□□ 0.58
TPM2-204ENST00000378300 ANKRD24Q8TF21 1146 aa18.65■□□□□ 0.58
TPM2-204ENST00000378300 RGPD2P0DJD1 1756 aa18.64■□□□□ 0.57
TPM2-204ENST00000378300 USHBP1Q8N6Y0 703 aa18.64■□□□□ 0.57
TPM2-204ENST00000378300 RRP7AQ9Y3A4 280 aaKnown RBP18.64■□□□□ 0.57
TPM2-204ENST00000378300 NBPF6Q5VWK0 638 aa18.63■□□□□ 0.57
TPM2-204ENST00000378300 PHACTR3Q96KR7 559 aa18.63■□□□□ 0.57
TPM2-204ENST00000378300 NBPF4Q96M43 638 aa18.63■□□□□ 0.57
TPM2-204ENST00000378300 FAM83GA6ND36 823 aa18.63■□□□□ 0.57
TPM2-204ENST00000378300 ERBB3P21860 1342 aa18.62■□□□□ 0.57
TPM2-204ENST00000378300 NEUROD2Q15784 382 aa18.62■□□□□ 0.57
TPM2-204ENST00000378300 CAMTA1Q9Y6Y1 1673 aa18.62■□□□□ 0.57
TPM2-204ENST00000378300 LMO7Q8WWI1 1683 aa18.61■□□□□ 0.57
TPM2-204ENST00000378300 HSPA1LP34931 641 aa18.61■□□□□ 0.57
TPM2-204ENST00000378300 KDRP35968 1356 aa18.6■□□□□ 0.57
TPM2-204ENST00000378300 MAPK8IP3Q9UPT6 1336 aa18.6■□□□□ 0.57
TPM2-204ENST00000378300 ABCC6O95255 1503 aa18.6■□□□□ 0.57
TPM2-204ENST00000378300 NUTM2BA6NNL0 878 aaPredicted RBP18.6■□□□□ 0.57
TPM2-204ENST00000378300 NUTM2EB1AL46 878 aaPredicted RBP18.6■□□□□ 0.57
TPM2-204ENST00000378300 NUTM2AQ8IVF1 878 aaPredicted RBP18.6■□□□□ 0.57
TPM2-204ENST00000378300 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
TPM2-204ENST00000378300 ADAMTS2O95450 1211 aa18.58■□□□□ 0.57
TPM2-204ENST00000378300 TMPOP42166 694 aaKnown RBP18.58■□□□□ 0.56
TPM2-204ENST00000378300 SUPT16HQ9Y5B9 1047 aaKnown RBP18.58■□□□□ 0.56
TPM2-204ENST00000378300 JCADQ9P266 1359 aa18.57■□□□□ 0.56
TPM2-204ENST00000378300 CSB-PGBD3P0DP91 1061 aa18.56■□□□□ 0.56
TPM2-204ENST00000378300 COL5A2P05997 1499 aaPredicted RBP18.56■□□□□ 0.56
TPM2-204ENST00000378300 ZNF521Q96K83 1311 aa18.56■□□□□ 0.56
TPM2-204ENST00000378300 CDCA7LQ96GN5 454 aa18.55■□□□□ 0.56
TPM2-204ENST00000378300 NLRP2Q9NX02 1062 aa18.55■□□□□ 0.56
TPM2-204ENST00000378300 NCAPD2Q15021 1401 aa18.55■□□□□ 0.56
TPM2-204ENST00000378300 WWC1Q8IX03 1113 aa18.55■□□□□ 0.56
TPM2-204ENST00000378300 BTG4Q9NY30 223 aa18.55■□□□□ 0.56
TPM2-204ENST00000378300 NEFMP07197 916 aa18.54■□□□□ 0.56
TPM2-204ENST00000378300 RIPK4P57078 832 aa18.54■□□□□ 0.56
TPM2-204ENST00000378300 STRN4Q9NRL3 753 aa18.54■□□□□ 0.56
TPM2-204ENST00000378300 COL14A1Q05707 1796 aaKnown RBP18.53■□□□□ 0.56
TPM2-204ENST00000378300 NFE2L2Q16236 605 aa18.53■□□□□ 0.56
TPM2-204ENST00000378300 PHF23Q9BUL5 403 aaPredicted RBP18.53■□□□□ 0.56
TPM2-204ENST00000378300 TRIM35Q9UPQ4 493 aa18.53■□□□□ 0.56
TPM2-204ENST00000378300 WDR17Q8IZU2 1322 aa18.52■□□□□ 0.56
TPM2-204ENST00000378300 FAM208AQ9UK61 1670 aaKnown RBP18.52■□□□□ 0.56
TPM2-204ENST00000378300 MTHFSDQ2M296 383 aaKnown RBP18.52■□□□□ 0.55
TPM2-204ENST00000378300 LARP1Q6PKG0 1096 aaKnown RBP18.52■□□□□ 0.55
TPM2-204ENST00000378300 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
TPM2-204ENST00000378300 DLG5Q8TDM6 1919 aa18.51■□□□□ 0.55
TPM2-204ENST00000378300 EVA1CP58658 441 aa18.5■□□□□ 0.55
TPM2-204ENST00000378300 CCDC27Q2M243 656 aa18.5■□□□□ 0.55
TPM2-204ENST00000378300 TOM1L2Q6ZVM7 507 aa18.5■□□□□ 0.55
TPM2-204ENST00000378300 NGEFQ8N5V2 710 aa18.5■□□□□ 0.55
TPM2-204ENST00000378300 PLCH1Q4KWH8 1693 aa18.5■□□□□ 0.55
TPM2-204ENST00000378300 LRP6O75581 1613 aa18.5■□□□□ 0.55
TPM2-204ENST00000378300 GOLGA2Q08379 1002 aa18.48■□□□□ 0.55
TPM2-204ENST00000378300 SPATA31A6Q5VVP1 1343 aa18.48■□□□□ 0.55
TPM2-204ENST00000378300 PDE3BQ13370 1112 aa18.47■□□□□ 0.55
TPM2-204ENST00000378300 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
TPM2-204ENST00000378300 THUMPD2Q9BTF0 503 aaKnown RBP18.47■□□□□ 0.55
TPM2-204ENST00000378300 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
TPM2-204ENST00000378300 MEGF6O75095 1541 aa18.47■□□□□ 0.55
TPM2-204ENST00000378300 USP35Q9P2H5 1018 aa18.46■□□□□ 0.55
TPM2-204ENST00000378300 C8orf37Q96NL8 207 aa18.45■□□□□ 0.54
TPM2-204ENST00000378300 CARD10Q9BWT7 1032 aa18.45■□□□□ 0.54
TPM2-204ENST00000378300 SLFN5Q08AF3 891 aa18.45■□□□□ 0.54
TPM2-204ENST00000378300 WDR63Q8IWG1 891 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms