RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 LARP1Q6PKG0 1096 aaKnown RBP15.96■□□□□ 0.15
DEPDC4-202ENST00000378244 TRPC5Q9UL62 973 aaPredicted RBP15.96■□□□□ 0.15
DEPDC4-202ENST00000378244 AATKQ6ZMQ8 1374 aa15.96■□□□□ 0.14
DEPDC4-202ENST00000378244 NSD2O96028 1365 aa15.95■□□□□ 0.14
DEPDC4-202ENST00000378244 HSP90AB2PQ58FF8 381 aa15.94■□□□□ 0.14
DEPDC4-202ENST00000378244 POLKQ9UBT6 870 aa15.94■□□□□ 0.14
DEPDC4-202ENST00000378244 COL14A1Q05707 1796 aaKnown RBP15.94■□□□□ 0.14
DEPDC4-202ENST00000378244 HOXC9P31274 260 aa15.94■□□□□ 0.14
DEPDC4-202ENST00000378244 TOM1L2Q6ZVM7 507 aa15.93■□□□□ 0.14
DEPDC4-202ENST00000378244 PLCH1Q4KWH8 1693 aa15.93■□□□□ 0.14
DEPDC4-202ENST00000378244 RXRBP28702 533 aa15.93■□□□□ 0.14
DEPDC4-202ENST00000378244 IP6K1Q92551 441 aa15.93■□□□□ 0.14
DEPDC4-202ENST00000378244 GJD4Q96KN9 370 aaPredicted RBP15.93■□□□□ 0.14
DEPDC4-202ENST00000378244 USP54Q70EL1 1684 aa15.92■□□□□ 0.14
DEPDC4-202ENST00000378244 A0A0G2JS52 829 aa15.92■□□□□ 0.14
DEPDC4-202ENST00000378244 MYT1Q01538 1121 aa15.92■□□□□ 0.14
DEPDC4-202ENST00000378244 VPS72Q15906 364 aa15.91■□□□□ 0.14
DEPDC4-202ENST00000378244 ANKRD24Q8TF21 1146 aa15.91■□□□□ 0.14
DEPDC4-202ENST00000378244 COL5A2P05997 1499 aaPredicted RBP15.91■□□□□ 0.14
DEPDC4-202ENST00000378244 NLRP2Q9NX02 1062 aa15.91■□□□□ 0.14
DEPDC4-202ENST00000378244 RBM6P78332 1123 aaKnown RBP15.9■□□□□ 0.14
DEPDC4-202ENST00000378244 LTN1O94822 1766 aa15.9■□□□□ 0.14
DEPDC4-202ENST00000378244 ERBB3P21860 1342 aa15.9■□□□□ 0.14
DEPDC4-202ENST00000378244 FAM98CQ17RN3 349 aaKnown RBP15.9■□□□□ 0.14
DEPDC4-202ENST00000378244 MTHFSP49914 203 aa15.89■□□□□ 0.13
DEPDC4-202ENST00000378244 LMO7Q8WWI1 1683 aa15.89■□□□□ 0.13
DEPDC4-202ENST00000378244 WDR17Q8IZU2 1322 aa15.89■□□□□ 0.13
DEPDC4-202ENST00000378244 ATRNO75882 1429 aa15.89■□□□□ 0.13
DEPDC4-202ENST00000378244 ILDR2Q71H61 639 aa15.89■□□□□ 0.13
DEPDC4-202ENST00000378244 FLT4P35916 1363 aa15.89■□□□□ 0.13
DEPDC4-202ENST00000378244 NPC1L1Q9UHC9 1359 aa15.89■□□□□ 0.13
DEPDC4-202ENST00000378244 SPATA31A5Q5VU36 1347 aa15.88■□□□□ 0.13
DEPDC4-202ENST00000378244 SPATA31A7Q8IWB4 1347 aa15.88■□□□□ 0.13
DEPDC4-202ENST00000378244 COL18A1P39060 1754 aa15.87■□□□□ 0.13
DEPDC4-202ENST00000378244 RGPD5Q99666 1765 aa15.87■□□□□ 0.13
DEPDC4-202ENST00000378244 SPATA31A1Q5TZJ5 1347 aa15.87■□□□□ 0.13
DEPDC4-202ENST00000378244 NWD2Q9ULI1 1742 aa15.87■□□□□ 0.13
DEPDC4-202ENST00000378244 USHBP1Q8N6Y0 703 aa15.86■□□□□ 0.13
DEPDC4-202ENST00000378244 ANKRD26Q9UPS8 1709 aa15.86■□□□□ 0.13
DEPDC4-202ENST00000378244 BLMP54132 1417 aaPredicted RBP15.86■□□□□ 0.13
DEPDC4-202ENST00000378244 MAP2P11137 1827 aaKnown RBP15.86■□□□□ 0.13
DEPDC4-202ENST00000378244 NRAPQ86VF7 1730 aa15.86■□□□□ 0.13
DEPDC4-202ENST00000378244 CRB1P82279 1406 aa15.85■□□□□ 0.13
DEPDC4-202ENST00000378244 PEAK1Q9H792 1746 aa15.85■□□□□ 0.13
DEPDC4-202ENST00000378244 RTL1A6NKG5 1358 aa15.85■□□□□ 0.13
DEPDC4-202ENST00000378244 TCP11L2Q8N4U5 519 aa15.85■□□□□ 0.13
DEPDC4-202ENST00000378244 EP400Q96L91 3159 aa15.85■□□□□ 0.13
DEPDC4-202ENST00000378244 INSRP06213 1382 aa15.85■□□□□ 0.13
DEPDC4-202ENST00000378244 PPP2R1AP30153 589 aa15.84■□□□□ 0.13
DEPDC4-202ENST00000378244 NBPF6Q5VWK0 638 aa15.84■□□□□ 0.13
DEPDC4-202ENST00000378244 NBPF4Q96M43 638 aa15.84■□□□□ 0.13
DEPDC4-202ENST00000378244 EIF4A2Q14240 407 aaKnown RBP15.83■□□□□ 0.12
DEPDC4-202ENST00000378244 SEPT12Q8IYM1 358 aa15.83■□□□□ 0.12
DEPDC4-202ENST00000378244 GLI3P10071 1580 aa15.83■□□□□ 0.12
DEPDC4-202ENST00000378244 CARD10Q9BWT7 1032 aa15.83■□□□□ 0.12
DEPDC4-202ENST00000378244 KIF24Q5T7B8 1368 aa15.82■□□□□ 0.12
DEPDC4-202ENST00000378244 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.82■□□□□ 0.12
DEPDC4-202ENST00000378244 SMG6Q86US8 1419 aaKnown RBP15.82■□□□□ 0.12
DEPDC4-202ENST00000378244 PARD3Q8TEW0 1356 aa15.81■□□□□ 0.12
DEPDC4-202ENST00000378244 FAM182BQ5T319 152 aa15.8■□□□□ 0.12
DEPDC4-202ENST00000378244 PRKRIP1Q9H875 184 aaPredicted RBP15.8■□□□□ 0.12
DEPDC4-202ENST00000378244 RGS12O14924 1447 aa15.8■□□□□ 0.12
DEPDC4-202ENST00000378244 ABCC6O95255 1503 aa15.8■□□□□ 0.12
DEPDC4-202ENST00000378244 EYA1Q99502 592 aa15.8■□□□□ 0.12
DEPDC4-202ENST00000378244 RALBP1Q15311 655 aa15.79■□□□□ 0.12
DEPDC4-202ENST00000378244 ONECUT3O60422 494 aaPredicted RBP15.78■□□□□ 0.12
DEPDC4-202ENST00000378244 BARGINQ6ZT62 677 aa15.78■□□□□ 0.12
DEPDC4-202ENST00000378244 THRAP3Q9Y2W1 955 aaKnown RBP15.78■□□□□ 0.12
DEPDC4-202ENST00000378244 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
DEPDC4-202ENST00000378244 U2SURPO15042 1029 aaKnown RBP15.78■□□□□ 0.12
DEPDC4-202ENST00000378244 DIAPH1O60610 1272 aaKnown RBP15.78■□□□□ 0.12
DEPDC4-202ENST00000378244 IL2RBP14784 551 aa15.77■□□□□ 0.11
DEPDC4-202ENST00000378244 IL13P35225 146 aa15.77■□□□□ 0.11
DEPDC4-202ENST00000378244 CFAP53Q96M91 514 aa15.77■□□□□ 0.11
DEPDC4-202ENST00000378244 DDB1Q16531 1140 aa15.76■□□□□ 0.11
DEPDC4-202ENST00000378244 ANP32CO43423 234 aa15.76■□□□□ 0.11
DEPDC4-202ENST00000378244 HMOX1P09601 288 aa15.76■□□□□ 0.11
DEPDC4-202ENST00000378244 PDE3BQ13370 1112 aa15.76■□□□□ 0.11
DEPDC4-202ENST00000378244 AEBP1Q8IUX7 1158 aa15.76■□□□□ 0.11
DEPDC4-202ENST00000378244 RAPGEF4Q8WZA2 1011 aa15.76■□□□□ 0.11
DEPDC4-202ENST00000378244 RGPD2P0DJD1 1756 aa15.75■□□□□ 0.11
DEPDC4-202ENST00000378244 MYBBP1AQ9BQG0 1328 aaKnown RBP15.75■□□□□ 0.11
DEPDC4-202ENST00000378244 SULT6B1Q6IMI4 303 aa15.74■□□□□ 0.11
DEPDC4-202ENST00000378244 KRT27Q7Z3Y8 459 aa15.74■□□□□ 0.11
DEPDC4-202ENST00000378244 EXOC5O00471 708 aa15.74■□□□□ 0.11
DEPDC4-202ENST00000378244 DDX54Q8TDD1 881 aaKnown RBP15.73■□□□□ 0.11
DEPDC4-202ENST00000378244 IGSF1Q8N6C5 1336 aa15.73■□□□□ 0.11
DEPDC4-202ENST00000378244 CDCA7Q9BWT1 371 aaPredicted RBP15.72■□□□□ 0.11
DEPDC4-202ENST00000378244 TATP17735 454 aaPredicted RBP15.72■□□□□ 0.11
DEPDC4-202ENST00000378244 MEGF6O75095 1541 aa15.71■□□□□ 0.11
DEPDC4-202ENST00000378244 DISP2A7MBM2 1401 aa15.71■□□□□ 0.1
DEPDC4-202ENST00000378244 U2AF1L5P0DN76 240 aaPredicted RBP15.71■□□□□ 0.1
DEPDC4-202ENST00000378244 U2AF1Q01081 240 aaKnown RBP eCLIP15.71■□□□□ 0.1
DEPDC4-202ENST00000378244 NUDCQ9Y266 331 aa15.7■□□□□ 0.1
DEPDC4-202ENST00000378244 COL3A1P02461 1466 aaPredicted RBP15.7■□□□□ 0.1
DEPDC4-202ENST00000378244 CCDC184Q52MB2 194 aa15.69■□□□□ 0.1
DEPDC4-202ENST00000378244 ZCRB1Q8TBF4 217 aaKnown RBP15.69■□□□□ 0.1
DEPDC4-202ENST00000378244 MARCH10Q8NA82 808 aaPredicted RBP15.69■□□□□ 0.1
DEPDC4-202ENST00000378244 THSD7AQ9UPZ6 1657 aa15.69■□□□□ 0.1
DEPDC4-202ENST00000378244 DIEXFQ68CQ4 756 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms