RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 WASHC2AQ641Q2 1341 aa28.35■■■□□ 2.13
TRIM13-203ENST00000378183 SOCS7O14512 581 aa28.34■■■□□ 2.13
TRIM13-203ENST00000378183 SPATA31A5Q5VU36 1347 aa28.34■■■□□ 2.13
TRIM13-203ENST00000378183 SPATA31A7Q8IWB4 1347 aa28.34■■■□□ 2.13
TRIM13-203ENST00000378183 FBLN1P23142 703 aa28.33■■■□□ 2.13
TRIM13-203ENST00000378183 EVA1CP58658 441 aa28.33■■■□□ 2.13
TRIM13-203ENST00000378183 LARP1Q6PKG0 1096 aaKnown RBP28.32■■■□□ 2.12
TRIM13-203ENST00000378183 ABCC6O95255 1503 aa28.32■■■□□ 2.12
TRIM13-203ENST00000378183 CGNL1Q0VF96 1302 aa28.3■■■□□ 2.12
TRIM13-203ENST00000378183 SPATA31A1Q5TZJ5 1347 aa28.3■■■□□ 2.12
TRIM13-203ENST00000378183 ONECUT3O60422 494 aaPredicted RBP28.3■■■□□ 2.12
TRIM13-203ENST00000378183 BRWD3Q6RI45 1802 aa28.29■■■□□ 2.12
TRIM13-203ENST00000378183 ANKRD26Q9UPS8 1709 aa28.29■■■□□ 2.12
TRIM13-203ENST00000378183 FAM98CQ17RN3 349 aaKnown RBP28.26■■■□□ 2.11
TRIM13-203ENST00000378183 MAP3K19Q56UN5 1328 aa28.25■■■□□ 2.11
TRIM13-203ENST00000378183 SEPT12Q8IYM1 358 aa28.24■■■□□ 2.11
TRIM13-203ENST00000378183 CRB1P82279 1406 aa28.24■■■□□ 2.11
TRIM13-203ENST00000378183 WDR17Q8IZU2 1322 aa28.23■■■□□ 2.11
TRIM13-203ENST00000378183 THSD7AQ9UPZ6 1657 aa28.23■■■□□ 2.11
TRIM13-203ENST00000378183 ZEB1P37275 1124 aaPredicted RBP28.23■■■□□ 2.11
TRIM13-203ENST00000378183 USP35Q9P2H5 1018 aa28.23■■■□□ 2.11
TRIM13-203ENST00000378183 RRS1Q15050 365 aaKnown RBP28.22■■■□□ 2.11
TRIM13-203ENST00000378183 IP6K1Q92551 441 aa28.22■■■□□ 2.11
TRIM13-203ENST00000378183 PER1O15534 1290 aaPredicted RBP28.21■■■□□ 2.11
TRIM13-203ENST00000378183 PEAK1Q9H792 1746 aa28.21■■■□□ 2.11
TRIM13-203ENST00000378183 MAP2P11137 1827 aaKnown RBP28.2■■■□□ 2.11
TRIM13-203ENST00000378183 HOXC9P31274 260 aa28.19■■■□□ 2.1
TRIM13-203ENST00000378183 TOM1L2Q6ZVM7 507 aa28.19■■■□□ 2.1
TRIM13-203ENST00000378183 TCP11L2Q8N4U5 519 aa28.19■■■□□ 2.1
TRIM13-203ENST00000378183 KNSTRNQ9Y448 316 aa28.19■■■□□ 2.1
TRIM13-203ENST00000378183 BLMP54132 1417 aaPredicted RBP28.18■■■□□ 2.1
TRIM13-203ENST00000378183 BARGINQ6ZT62 677 aa28.18■■■□□ 2.1
TRIM13-203ENST00000378183 NSD2O96028 1365 aa28.18■■■□□ 2.1
TRIM13-203ENST00000378183 ERBB3P21860 1342 aa28.18■■■□□ 2.1
TRIM13-203ENST00000378183 AMPHP49418 695 aa28.17■■■□□ 2.1
TRIM13-203ENST00000378183 AMER1Q5JTC6 1135 aaPredicted RBP28.17■■■□□ 2.1
TRIM13-203ENST00000378183 WNK3Q9BYP7 1800 aa28.17■■■□□ 2.1
TRIM13-203ENST00000378183 CSB-PGBD3P0DP91 1061 aa28.16■■■□□ 2.1
TRIM13-203ENST00000378183 ANKRD24Q8TF21 1146 aa28.16■■■□□ 2.1
TRIM13-203ENST00000378183 THRAP3Q9Y2W1 955 aaKnown RBP28.16■■■□□ 2.1
TRIM13-203ENST00000378183 RTL1A6NKG5 1358 aa28.15■■■□□ 2.1
TRIM13-203ENST00000378183 A0A0G2JS52 829 aa28.14■■■□□ 2.1
TRIM13-203ENST00000378183 MYT1Q01538 1121 aa28.14■■■□□ 2.1
TRIM13-203ENST00000378183 CARD10Q9BWT7 1032 aa28.14■■■□□ 2.1
TRIM13-203ENST00000378183 EMILIN1Q9Y6C2 1016 aa28.13■■■□□ 2.09
TRIM13-203ENST00000378183 RGPD2P0DJD1 1756 aa28.13■■■□□ 2.09
TRIM13-203ENST00000378183 FAM208AQ9UK61 1670 aaKnown RBP28.12■■■□□ 2.09
TRIM13-203ENST00000378183 PARP4Q9UKK3 1724 aaKnown RBP28.12■■■□□ 2.09
TRIM13-203ENST00000378183 TNNT2P45379 298 aaPredicted RBP28.11■■■□□ 2.09
TRIM13-203ENST00000378183 LTV1Q96GA3 475 aaPredicted RBP28.11■■■□□ 2.09
TRIM13-203ENST00000378183 KIF24Q5T7B8 1368 aa28.11■■■□□ 2.09
TRIM13-203ENST00000378183 KRT27Q7Z3Y8 459 aa28.1■■■□□ 2.09
TRIM13-203ENST00000378183 POLKQ9UBT6 870 aa28.1■■■□□ 2.09
TRIM13-203ENST00000378183 FLT4P35916 1363 aa28.1■■■□□ 2.09
TRIM13-203ENST00000378183 HSP90AB2PQ58FF8 381 aa28.09■■■□□ 2.09
TRIM13-203ENST00000378183 MORC1Q86VD1 984 aa28.09■■■□□ 2.09
TRIM13-203ENST00000378183 UPF1Q92900 1129 aaKnown RBP eCLIP28.09■■■□□ 2.09
TRIM13-203ENST00000378183 NLRP2Q9NX02 1062 aa28.09■■■□□ 2.09
TRIM13-203ENST00000378183 EP400Q96L91 3159 aa28.07■■■□□ 2.08
TRIM13-203ENST00000378183 INSRP06213 1382 aa28.07■■■□□ 2.08
TRIM13-203ENST00000378183 DISP2A7MBM2 1401 aa28.07■■■□□ 2.08
TRIM13-203ENST00000378183 LRRC37A3O60309 1634 aa28.06■■■□□ 2.08
TRIM13-203ENST00000378183 NPC1L1Q9UHC9 1359 aa28.04■■■□□ 2.08
TRIM13-203ENST00000378183 PPM1GO15355 546 aaPredicted RBP28.04■■■□□ 2.08
TRIM13-203ENST00000378183 CC2D1BQ5T0F9 858 aaKnown RBP28.04■■■□□ 2.08
TRIM13-203ENST00000378183 FAM182BQ5T319 152 aa28.03■■■□□ 2.08
TRIM13-203ENST00000378183 SMG6Q86US8 1419 aaKnown RBP28.01■■■□□ 2.08
TRIM13-203ENST00000378183 NBPF6Q5VWK0 638 aa28■■■□□ 2.07
TRIM13-203ENST00000378183 NBPF4Q96M43 638 aa28■■■□□ 2.07
TRIM13-203ENST00000378183 CDCA7Q9BWT1 371 aaPredicted RBP28■■■□□ 2.07
TRIM13-203ENST00000378183 PDE3BQ13370 1112 aa27.97■■■□□ 2.07
TRIM13-203ENST00000378183 DDB1Q16531 1140 aa27.97■■■□□ 2.07
TRIM13-203ENST00000378183 IL2RBP14784 551 aa27.96■■■□□ 2.07
TRIM13-203ENST00000378183 CNGB1Q14028 1251 aaPredicted RBP27.96■■■□□ 2.07
TRIM13-203ENST00000378183 USHBP1Q8N6Y0 703 aa27.95■■■□□ 2.06
TRIM13-203ENST00000378183 EIF4A2Q14240 407 aaKnown RBP27.92■■■□□ 2.06
TRIM13-203ENST00000378183 TNS2Q63HR2 1409 aa27.92■■■□□ 2.06
TRIM13-203ENST00000378183 EXOC5O00471 708 aa27.91■■■□□ 2.06
TRIM13-203ENST00000378183 FAM196AQ6ZSG2 479 aa27.9■■■□□ 2.06
TRIM13-203ENST00000378183 MARCH10Q8NA82 808 aaPredicted RBP27.9■■■□□ 2.06
TRIM13-203ENST00000378183 MEGF6O75095 1541 aa27.9■■■□□ 2.06
TRIM13-203ENST00000378183 NCAPD2Q15021 1401 aa27.9■■■□□ 2.06
TRIM13-203ENST00000378183 DDX10Q13206 875 aaKnown RBP27.89■■■□□ 2.06
TRIM13-203ENST00000378183 CCDC125Q86Z20 511 aa27.89■■■□□ 2.06
TRIM13-203ENST00000378183 EYA1Q99502 592 aa27.89■■■□□ 2.06
TRIM13-203ENST00000378183 SBF2Q86WG5 1849 aa27.88■■■□□ 2.05
TRIM13-203ENST00000378183 MTHFSP49914 203 aa27.88■■■□□ 2.05
TRIM13-203ENST00000378183 SHANK3Q9BYB0 1731 aa27.88■■■□□ 2.05
TRIM13-203ENST00000378183 RGPD1P0DJD0 1748 aa27.87■■■□□ 2.05
TRIM13-203ENST00000378183 TNS1Q9HBL0 1735 aaKnown RBP27.86■■■□□ 2.05
TRIM13-203ENST00000378183 OVOS2A0A0G2JMS6 1433 aa27.85■■■□□ 2.05
TRIM13-203ENST00000378183 TRIM37O94972 964 aa27.82■■■□□ 2.04
TRIM13-203ENST00000378183 BCL9O00512 1426 aa27.82■■■□□ 2.04
TRIM13-203ENST00000378183 IL13P35225 146 aa27.81■■■□□ 2.04
TRIM13-203ENST00000378183 RAPGEF4Q8WZA2 1011 aa27.81■■■□□ 2.04
TRIM13-203ENST00000378183 IGSF1Q8N6C5 1336 aa27.81■■■□□ 2.04
TRIM13-203ENST00000378183 TATP17735 454 aaPredicted RBP27.79■■■□□ 2.04
TRIM13-203ENST00000378183 ZCRB1Q8TBF4 217 aaKnown RBP27.79■■■□□ 2.04
TRIM13-203ENST00000378183 PKD1L3Q7Z443 1732 aa27.78■■■□□ 2.04
TRIM13-203ENST00000378183 COL3A1P02461 1466 aaPredicted RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms