RNA–Protein interactions for RNA: ENST00000377755.8

KRT40-201, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-201ENST00000377755 HOXC9P31274 260 aa17.33■□□□□ 0.36
KRT40-201ENST00000377755 U2AF1L5P0DN76 240 aaPredicted RBP17.32■□□□□ 0.36
KRT40-201ENST00000377755 U2AF1Q01081 240 aaKnown RBP eCLIP17.32■□□□□ 0.36
KRT40-201ENST00000377755 EIF4A2Q14240 407 aaKnown RBP17.32■□□□□ 0.36
KRT40-201ENST00000377755 LTN1O94822 1766 aa17.32■□□□□ 0.36
KRT40-201ENST00000377755 PHRF1Q9P1Y6 1649 aaKnown RBP17.32■□□□□ 0.36
KRT40-201ENST00000377755 CRYBG1Q9Y4K1 1723 aa17.31■□□□□ 0.36
KRT40-201ENST00000377755 KIF24Q5T7B8 1368 aa17.31■□□□□ 0.36
KRT40-201ENST00000377755 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
KRT40-201ENST00000377755 IP6K1Q92551 441 aa17.31■□□□□ 0.36
KRT40-201ENST00000377755 PHLPP1O60346 1717 aa17.3■□□□□ 0.36
KRT40-201ENST00000377755 BLMP54132 1417 aaPredicted RBP17.3■□□□□ 0.36
KRT40-201ENST00000377755 RTL1A6NKG5 1358 aa17.29■□□□□ 0.36
KRT40-201ENST00000377755 COL16A1Q07092 1604 aaPredicted RBP17.29■□□□□ 0.36
KRT40-201ENST00000377755 AXIN2Q9Y2T1 843 aa17.28■□□□□ 0.36
KRT40-201ENST00000377755 LTV1Q96GA3 475 aaPredicted RBP17.27■□□□□ 0.36
KRT40-201ENST00000377755 KIAA0232Q92628 1395 aa17.26■□□□□ 0.35
KRT40-201ENST00000377755 HAP1P54257 671 aaPredicted RBP17.26■□□□□ 0.35
KRT40-201ENST00000377755 HMOX1P09601 288 aa17.26■□□□□ 0.35
KRT40-201ENST00000377755 CHRNA2Q15822 529 aa17.26■□□□□ 0.35
KRT40-201ENST00000377755 CPDO75976 1380 aa17.25■□□□□ 0.35
KRT40-201ENST00000377755 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
KRT40-201ENST00000377755 ABCA3Q99758 1704 aa17.25■□□□□ 0.35
KRT40-201ENST00000377755 RUNDC1Q96C34 613 aa17.24■□□□□ 0.35
KRT40-201ENST00000377755 PLEKHF1Q96S99 279 aa17.24■□□□□ 0.35
KRT40-201ENST00000377755 APAF1O14727 1248 aa17.24■□□□□ 0.35
KRT40-201ENST00000377755 FCHSD2O94868 740 aa17.24■□□□□ 0.35
KRT40-201ENST00000377755 EYA1Q99502 592 aa17.24■□□□□ 0.35
KRT40-201ENST00000377755 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
KRT40-201ENST00000377755 SULT6B1Q6IMI4 303 aa17.23■□□□□ 0.35
KRT40-201ENST00000377755 AEBP1Q8IUX7 1158 aa17.23■□□□□ 0.35
KRT40-201ENST00000377755 COL22A1Q8NFW1 1626 aaPredicted RBP17.22■□□□□ 0.35
KRT40-201ENST00000377755 COL18A1P39060 1754 aa17.22■□□□□ 0.35
KRT40-201ENST00000377755 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
KRT40-201ENST00000377755 ZBED9Q6R2W3 1325 aa17.22■□□□□ 0.35
KRT40-201ENST00000377755 RGPD1P0DJD0 1748 aa17.22■□□□□ 0.35
KRT40-201ENST00000377755 PRKAR2BP31323 418 aa17.21■□□□□ 0.35
KRT40-201ENST00000377755 ANKRD24Q8TF21 1146 aa17.21■□□□□ 0.35
KRT40-201ENST00000377755 RGPD5Q99666 1765 aa17.21■□□□□ 0.35
KRT40-201ENST00000377755 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.35
KRT40-201ENST00000377755 TCP11L2Q8N4U5 519 aa17.21■□□□□ 0.35
KRT40-201ENST00000377755 FAM83GA6ND36 823 aa17.2■□□□□ 0.34
KRT40-201ENST00000377755 NBPF6Q5VWK0 638 aa17.2■□□□□ 0.34
KRT40-201ENST00000377755 NBPF4Q96M43 638 aa17.2■□□□□ 0.34
KRT40-201ENST00000377755 PNNQ9H307 717 aaKnown RBP17.19■□□□□ 0.34
KRT40-201ENST00000377755 ERBB3P21860 1342 aa17.19■□□□□ 0.34
KRT40-201ENST00000377755 PHACTR3Q96KR7 559 aa17.19■□□□□ 0.34
KRT40-201ENST00000377755 RRP7AQ9Y3A4 280 aaKnown RBP17.19■□□□□ 0.34
KRT40-201ENST00000377755 HSPA1LP34931 641 aa17.18■□□□□ 0.34
KRT40-201ENST00000377755 USHBP1Q8N6Y0 703 aa17.18■□□□□ 0.34
KRT40-201ENST00000377755 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
KRT40-201ENST00000377755 MAPK8IP3Q9UPT6 1336 aa17.17■□□□□ 0.34
KRT40-201ENST00000377755 KDRP35968 1356 aa17.17■□□□□ 0.34
KRT40-201ENST00000377755 ABCC6O95255 1503 aa17.17■□□□□ 0.34
KRT40-201ENST00000377755 CAMTA1Q9Y6Y1 1673 aa17.17■□□□□ 0.34
KRT40-201ENST00000377755 RGPD2P0DJD1 1756 aa17.16■□□□□ 0.34
KRT40-201ENST00000377755 JCADQ9P266 1359 aa17.16■□□□□ 0.34
KRT40-201ENST00000377755 NUTM2BA6NNL0 878 aaPredicted RBP17.16■□□□□ 0.34
KRT40-201ENST00000377755 NUTM2EB1AL46 878 aaPredicted RBP17.16■□□□□ 0.34
KRT40-201ENST00000377755 NUTM2AQ8IVF1 878 aaPredicted RBP17.16■□□□□ 0.34
KRT40-201ENST00000377755 LMO7Q8WWI1 1683 aa17.16■□□□□ 0.34
KRT40-201ENST00000377755 ADAMTS2O95450 1211 aa17.15■□□□□ 0.34
KRT40-201ENST00000377755 TMPOP42166 694 aaKnown RBP17.14■□□□□ 0.34
KRT40-201ENST00000377755 NEFMP07197 916 aa17.14■□□□□ 0.33
KRT40-201ENST00000377755 CSB-PGBD3P0DP91 1061 aa17.14■□□□□ 0.33
KRT40-201ENST00000377755 NLRP2Q9NX02 1062 aa17.13■□□□□ 0.33
KRT40-201ENST00000377755 COL5A2P05997 1499 aaPredicted RBP17.13■□□□□ 0.33
KRT40-201ENST00000377755 BTG4Q9NY30 223 aa17.12■□□□□ 0.33
KRT40-201ENST00000377755 ZNF521Q96K83 1311 aa17.12■□□□□ 0.33
KRT40-201ENST00000377755 NCAPD2Q15021 1401 aa17.12■□□□□ 0.33
KRT40-201ENST00000377755 RIPK4P57078 832 aa17.11■□□□□ 0.33
KRT40-201ENST00000377755 NFE2L2Q16236 605 aa17.11■□□□□ 0.33
KRT40-201ENST00000377755 WWC1Q8IX03 1113 aa17.11■□□□□ 0.33
KRT40-201ENST00000377755 NGEFQ8N5V2 710 aa17.11■□□□□ 0.33
KRT40-201ENST00000377755 STRN4Q9NRL3 753 aa17.11■□□□□ 0.33
KRT40-201ENST00000377755 WDR17Q8IZU2 1322 aa17.1■□□□□ 0.33
KRT40-201ENST00000377755 COL14A1Q05707 1796 aaKnown RBP17.1■□□□□ 0.33
KRT40-201ENST00000377755 EVA1CP58658 441 aa17.1■□□□□ 0.33
KRT40-201ENST00000377755 CDCA7LQ96GN5 454 aa17.1■□□□□ 0.33
KRT40-201ENST00000377755 TRIM35Q9UPQ4 493 aa17.1■□□□□ 0.33
KRT40-201ENST00000377755 CCDC27Q2M243 656 aa17.09■□□□□ 0.33
KRT40-201ENST00000377755 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
KRT40-201ENST00000377755 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
KRT40-201ENST00000377755 LARP1Q6PKG0 1096 aaKnown RBP17.09■□□□□ 0.33
KRT40-201ENST00000377755 TOM1L2Q6ZVM7 507 aa17.08■□□□□ 0.33
KRT40-201ENST00000377755 SPATA31A6Q5VVP1 1343 aa17.08■□□□□ 0.32
KRT40-201ENST00000377755 PDE3BQ13370 1112 aa17.07■□□□□ 0.32
KRT40-201ENST00000377755 FAM208AQ9UK61 1670 aaKnown RBP17.07■□□□□ 0.32
KRT40-201ENST00000377755 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
KRT40-201ENST00000377755 GOLGA2Q08379 1002 aa17.05■□□□□ 0.32
KRT40-201ENST00000377755 LRP6O75581 1613 aa17.05■□□□□ 0.32
KRT40-201ENST00000377755 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
KRT40-201ENST00000377755 GAS2L2Q8NHY3 880 aa17.04■□□□□ 0.32
KRT40-201ENST00000377755 C8orf37Q96NL8 207 aa17.04■□□□□ 0.32
KRT40-201ENST00000377755 PLCH1Q4KWH8 1693 aa17.04■□□□□ 0.32
KRT40-201ENST00000377755 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
KRT40-201ENST00000377755 WDR63Q8IWG1 891 aa17.03■□□□□ 0.32
KRT40-201ENST00000377755 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
KRT40-201ENST00000377755 USP35Q9P2H5 1018 aa17.03■□□□□ 0.32
KRT40-201ENST00000377755 CRB1P82279 1406 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms