RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 ZFYVE27Q5T4F4 411 aa19.74■□□□□ 0.75
ATXN2-201ENST00000377617 RBM33Q96EV2 1170 aaKnown RBP19.73■□□□□ 0.75
ATXN2-201ENST00000377617 LTV1Q96GA3 475 aaPredicted RBP19.73■□□□□ 0.75
ATXN2-201ENST00000377617 MVPQ14764 893 aaKnown RBP19.73■□□□□ 0.75
ATXN2-201ENST00000377617 SURF6O75683 361 aaKnown RBP19.73■□□□□ 0.75
ATXN2-201ENST00000377617 SART3Q15020 963 aaKnown RBP19.73■□□□□ 0.75
ATXN2-201ENST00000377617 UVSSAQ2YD98 709 aa19.73■□□□□ 0.75
ATXN2-201ENST00000377617 BCAR3O75815 825 aa19.73■□□□□ 0.75
ATXN2-201ENST00000377617 SMARCC1Q92922 1105 aaPredicted RBP19.73■□□□□ 0.75
ATXN2-201ENST00000377617 TCEAL9Q9UHQ7 104 aa19.72■□□□□ 0.75
ATXN2-201ENST00000377617 GTF2E1P29083 439 aaPredicted RBP19.72■□□□□ 0.75
ATXN2-201ENST00000377617 SPDYE4A6NLX3 237 aa19.71■□□□□ 0.75
ATXN2-201ENST00000377617 IVLP07476 585 aa19.71■□□□□ 0.75
ATXN2-201ENST00000377617 HNRNPMP52272 730 aaKnown RBP eCLIP19.71■□□□□ 0.751e-6■■□□□ 14.5
ATXN2-201ENST00000377617 CFAP100Q494V2 611 aa19.71■□□□□ 0.75
ATXN2-201ENST00000377617 SLC26A8Q96RN1 970 aa19.71■□□□□ 0.75
ATXN2-201ENST00000377617 SRCIN1Q9C0H9 1055 aa19.71■□□□□ 0.75
ATXN2-201ENST00000377617 KLHL40Q2TBA0 621 aa19.7■□□□□ 0.74
ATXN2-201ENST00000377617 C16orf45Q96MC5 204 aaPredicted RBP19.7■□□□□ 0.74
ATXN2-201ENST00000377617 TRIM34Q9BYJ4 488 aa19.7■□□□□ 0.74
ATXN2-201ENST00000377617 TSPYL4Q9UJ04 414 aa19.7■□□□□ 0.74
ATXN2-201ENST00000377617 VGFO15240 615 aaPredicted RBP19.7■□□□□ 0.74
ATXN2-201ENST00000377617 EXOSC9Q06265 439 aaKnown RBP19.7■□□□□ 0.74
ATXN2-201ENST00000377617 WASHC4Q2M389 1173 aa19.7■□□□□ 0.74
ATXN2-201ENST00000377617 TNPO1Q92973 898 aaKnown RBP19.7■□□□□ 0.74
ATXN2-201ENST00000377617 TBC1D2Q9BYX2 928 aa19.7■□□□□ 0.74
ATXN2-201ENST00000377617 USP25Q9UHP3 1055 aa19.7■□□□□ 0.74
ATXN2-201ENST00000377617 KIF5CO60282 957 aa19.7■□□□□ 0.74
ATXN2-201ENST00000377617 GSDMDP57764 484 aa19.7■□□□□ 0.74
ATXN2-201ENST00000377617 ANO10Q9NW15 660 aa19.7■□□□□ 0.74
ATXN2-201ENST00000377617 ATF7IPQ6VMQ6 1270 aa19.69■□□□□ 0.74
ATXN2-201ENST00000377617 SMAP1Q8IYB5 467 aaPredicted RBP19.69■□□□□ 0.74
ATXN2-201ENST00000377617 SCAND2PQ9GZW5 306 aaPredicted RBP19.69■□□□□ 0.74
ATXN2-201ENST00000377617 FHOD3Q2V2M9 1422 aa19.69■□□□□ 0.74
ATXN2-201ENST00000377617 IMMTQ16891 758 aaKnown RBP19.69■□□□□ 0.74
ATXN2-201ENST00000377617 RAPGEF2Q9Y4G8 1499 aa19.69■□□□□ 0.74
ATXN2-201ENST00000377617 LUZP1Q86V48 1076 aa19.69■□□□□ 0.74
ATXN2-201ENST00000377617 PPP2R1AP30153 589 aa19.68■□□□□ 0.74
ATXN2-201ENST00000377617 LMAN1P49257 510 aa19.68■□□□□ 0.74
ATXN2-201ENST00000377617 GOLGA6L10A0A0M3HER8 536 aa19.68■□□□□ 0.74
ATXN2-201ENST00000377617 CLIP2Q9UDT6 1046 aa19.68■□□□□ 0.74
ATXN2-201ENST00000377617 KIF4BQ2VIQ3 1234 aa19.68■□□□□ 0.74
ATXN2-201ENST00000377617 ERC1Q8IUD2 1116 aa19.68■□□□□ 0.74
ATXN2-201ENST00000377617 WDR63Q8IWG1 891 aa19.68■□□□□ 0.74
ATXN2-201ENST00000377617 CCDC43Q96MW1 224 aaKnown RBP19.68■□□□□ 0.74
ATXN2-201ENST00000377617 CCDC94Q9BW85 323 aaPredicted RBP19.68■□□□□ 0.74
ATXN2-201ENST00000377617 ATP2B1P20020 1258 aa19.68■□□□□ 0.74
ATXN2-201ENST00000377617 TICAM2Q86XR7 235 aa19.68■□□□□ 0.74
ATXN2-201ENST00000377617 CASQ1P31415 396 aa19.67■□□□□ 0.74
ATXN2-201ENST00000377617 HS1BP3Q53T59 392 aa19.67■□□□□ 0.74
ATXN2-201ENST00000377617 MAP2K1Q02750 393 aaPredicted RBP19.67■□□□□ 0.74
ATXN2-201ENST00000377617 GOLGA6L9A6NEM1 432 aa19.67■□□□□ 0.74
ATXN2-201ENST00000377617 G3V3G9 751 aa19.67■□□□□ 0.74
ATXN2-201ENST00000377617 GNAI2P04899 355 aa19.67■□□□□ 0.74
ATXN2-201ENST00000377617 XRCC6P12956 609 aaKnown RBP eCLIP19.67■□□□□ 0.742e-6■□□□□ 10.4
ATXN2-201ENST00000377617 DCAF8Q5TAQ9 597 aa19.67■□□□□ 0.74
ATXN2-201ENST00000377617 CAVIN2O95810 425 aa19.66■□□□□ 0.74
ATXN2-201ENST00000377617 BLOC1S2Q6QNY1 142 aa19.66■□□□□ 0.74
ATXN2-201ENST00000377617 SYCP1Q15431 976 aa19.66■□□□□ 0.74
ATXN2-201ENST00000377617 CCDC83Q8IWF9 413 aa19.66■□□□□ 0.74
ATXN2-201ENST00000377617 CCAR1Q8IX12 1150 aaKnown RBP19.66■□□□□ 0.74
ATXN2-201ENST00000377617 FBXO3Q9UK99 471 aa19.66■□□□□ 0.74
ATXN2-201ENST00000377617 KIF20AO95235 890 aa19.66■□□□□ 0.74
ATXN2-201ENST00000377617 RNF187Q5TA31 235 aaPredicted RBP19.66■□□□□ 0.74
ATXN2-201ENST00000377617 TTC5Q8N0Z6 440 aa19.65■□□□□ 0.74
ATXN2-201ENST00000377617 TAF4BQ92750 862 aa19.65■□□□□ 0.74
ATXN2-201ENST00000377617 CTAGE5O15320 804 aa19.65■□□□□ 0.74
ATXN2-201ENST00000377617 KIAA1328Q86T90 577 aa19.65■□□□□ 0.74
ATXN2-201ENST00000377617 NECTIN2Q92692 538 aa19.65■□□□□ 0.74
ATXN2-201ENST00000377617 NEUROD6Q96NK8 337 aa19.65■□□□□ 0.74
ATXN2-201ENST00000377617 PLEKHH1Q9ULM0 1364 aa19.65■□□□□ 0.74
ATXN2-201ENST00000377617 ZNF428Q96B54 188 aa19.64■□□□□ 0.74
ATXN2-201ENST00000377617 NOB1Q9ULX3 412 aaKnown RBP19.64■□□□□ 0.73
ATXN2-201ENST00000377617 NF2P35240 595 aa19.64■□□□□ 0.73
ATXN2-201ENST00000377617 ANKRD62A6NC57 917 aa19.63■□□□□ 0.73
ATXN2-201ENST00000377617 ZKSCAN5Q9Y2L8 839 aa19.63■□□□□ 0.73
ATXN2-201ENST00000377617 ADCY5O95622 1261 aa19.63■□□□□ 0.73
ATXN2-201ENST00000377617 DHX37Q8IY37 1157 aaKnown RBP19.63■□□□□ 0.73
ATXN2-201ENST00000377617 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.63■□□□□ 0.732e-7■■■■■ 61.3
ATXN2-201ENST00000377617 MLECQ14165 292 aa19.63■□□□□ 0.73
ATXN2-201ENST00000377617 KRT32Q14532 448 aa19.63■□□□□ 0.73
ATXN2-201ENST00000377617 PDRG1Q9NUG6 133 aa19.63■□□□□ 0.73
ATXN2-201ENST00000377617 MTHFSP49914 203 aa19.62■□□□□ 0.73
ATXN2-201ENST00000377617 FEZ1Q99689 392 aa19.62■□□□□ 0.73
ATXN2-201ENST00000377617 IBSPP21815 317 aaPredicted RBP19.62■□□□□ 0.73
ATXN2-201ENST00000377617 SSFA2P28290 1259 aa19.62■□□□□ 0.73
ATXN2-201ENST00000377617 TRIM22Q8IYM9 498 aa19.62■□□□□ 0.73
ATXN2-201ENST00000377617 NOLC1Q14978 699 aaKnown RBP eCLIP19.61■□□□□ 0.73
ATXN2-201ENST00000377617 TWISTNBQ3B726 338 aaPredicted RBP19.61■□□□□ 0.73
ATXN2-201ENST00000377617 CDK5RAP3Q96JB5 506 aa19.61■□□□□ 0.73
ATXN2-201ENST00000377617 CCDC175P0C221 793 aa19.61■□□□□ 0.73
ATXN2-201ENST00000377617 TOP1P11387 765 aaKnown RBP19.61■□□□□ 0.73
ATXN2-201ENST00000377617 DDX19AQ9NUU7 478 aaKnown RBP19.61■□□□□ 0.73
ATXN2-201ENST00000377617 CCDC171Q6TFL3 1326 aa19.61■□□□□ 0.73
ATXN2-201ENST00000377617 SMC1AQ14683 1233 aaKnown RBP19.61■□□□□ 0.73
ATXN2-201ENST00000377617 CCDC30Q5VVM6 783 aa19.6■□□□□ 0.73
ATXN2-201ENST00000377617 CEP135Q66GS9 1140 aa19.6■□□□□ 0.73
ATXN2-201ENST00000377617 C1orf115Q9H7X2 142 aa19.6■□□□□ 0.73
ATXN2-201ENST00000377617 SNW1Q13573 536 aaKnown RBP19.6■□□□□ 0.73
ATXN2-201ENST00000377617 RPAP2Q8IXW5 612 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms