RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 NUTM2BA6NNL0 878 aaPredicted RBP17.3■□□□□ 0.36
CBWD3-203ENST00000377344 NUTM2EB1AL46 878 aaPredicted RBP17.3■□□□□ 0.36
CBWD3-203ENST00000377344 NUTM2AQ8IVF1 878 aaPredicted RBP17.3■□□□□ 0.36
CBWD3-203ENST00000377344 IP6K1Q92551 441 aa17.3■□□□□ 0.36
CBWD3-203ENST00000377344 CHRNA2Q15822 529 aa17.29■□□□□ 0.36
CBWD3-203ENST00000377344 LTV1Q96GA3 475 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-203ENST00000377344 PRDM11Q9NQV5 511 aa17.29■□□□□ 0.36
CBWD3-203ENST00000377344 INSRP06213 1382 aa17.29■□□□□ 0.36
CBWD3-203ENST00000377344 JCADQ9P266 1359 aa17.29■□□□□ 0.36
CBWD3-203ENST00000377344 YTHDC1Q96MU7 727 aaKnown RBP17.28■□□□□ 0.36
CBWD3-203ENST00000377344 SHPRHQ149N8 1683 aa17.28■□□□□ 0.36
CBWD3-203ENST00000377344 CPDO75976 1380 aa17.28■□□□□ 0.36
CBWD3-203ENST00000377344 U2AF1L5P0DN76 240 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-203ENST00000377344 U2AF1Q01081 240 aaKnown RBP eCLIP17.28■□□□□ 0.36
CBWD3-203ENST00000377344 EIF4A2Q14240 407 aaKnown RBP17.28■□□□□ 0.36
CBWD3-203ENST00000377344 ADAMTS8Q9UP79 889 aa17.27■□□□□ 0.36
CBWD3-203ENST00000377344 IL13P35225 146 aa17.26■□□□□ 0.35
CBWD3-203ENST00000377344 AXIN2Q9Y2T1 843 aa17.26■□□□□ 0.35
CBWD3-203ENST00000377344 ADAMTS2O95450 1211 aa17.26■□□□□ 0.35
CBWD3-203ENST00000377344 BLMP54132 1417 aaPredicted RBP17.24■□□□□ 0.35
CBWD3-203ENST00000377344 FAM83GA6ND36 823 aa17.24■□□□□ 0.35
CBWD3-203ENST00000377344 ANKRD24Q8TF21 1146 aa17.24■□□□□ 0.35
CBWD3-203ENST00000377344 RGPD5Q99666 1765 aa17.23■□□□□ 0.35
CBWD3-203ENST00000377344 COL18A1P39060 1754 aa17.22■□□□□ 0.35
CBWD3-203ENST00000377344 HMOX1P09601 288 aa17.21■□□□□ 0.35
CBWD3-203ENST00000377344 CSB-PGBD3P0DP91 1061 aa17.21■□□□□ 0.35
CBWD3-203ENST00000377344 CCDC146Q8IYE0 955 aa17.21■□□□□ 0.35
CBWD3-203ENST00000377344 SPATA31A6Q5VVP1 1343 aa17.21■□□□□ 0.35
CBWD3-203ENST00000377344 ABCC6O95255 1503 aa17.21■□□□□ 0.35
CBWD3-203ENST00000377344 ERBB3P21860 1342 aa17.2■□□□□ 0.34
CBWD3-203ENST00000377344 SENP3-EIF4A1A0A087X0R7 540 aa17.2■□□□□ 0.34
CBWD3-203ENST00000377344 FBXO41Q8TF61 875 aa17.2■□□□□ 0.34
CBWD3-203ENST00000377344 EYA1Q99502 592 aa17.2■□□□□ 0.34
CBWD3-203ENST00000377344 SULT6B1Q6IMI4 303 aa17.19■□□□□ 0.34
CBWD3-203ENST00000377344 CAMTA1Q9Y6Y1 1673 aa17.19■□□□□ 0.34
CBWD3-203ENST00000377344 EVA1CP58658 441 aa17.19■□□□□ 0.34
CBWD3-203ENST00000377344 HNRNPUQ00839 825 aaKnown RBP eCLIP17.19■□□□□ 0.34
CBWD3-203ENST00000377344 STRN4Q9NRL3 753 aa17.19■□□□□ 0.34
CBWD3-203ENST00000377344 BTG4Q9NY30 223 aa17.19■□□□□ 0.34
CBWD3-203ENST00000377344 COL14A1Q05707 1796 aaKnown RBP17.18■□□□□ 0.34
CBWD3-203ENST00000377344 LMO7Q8WWI1 1683 aa17.18■□□□□ 0.34
CBWD3-203ENST00000377344 USHBP1Q8N6Y0 703 aa17.18■□□□□ 0.34
CBWD3-203ENST00000377344 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
CBWD3-203ENST00000377344 FCHSD2O94868 740 aa17.17■□□□□ 0.34
CBWD3-203ENST00000377344 NBPF6Q5VWK0 638 aa17.17■□□□□ 0.34
CBWD3-203ENST00000377344 AEBP1Q8IUX7 1158 aa17.17■□□□□ 0.34
CBWD3-203ENST00000377344 NBPF4Q96M43 638 aa17.17■□□□□ 0.34
CBWD3-203ENST00000377344 PNNQ9H307 717 aaKnown RBP17.17■□□□□ 0.34
CBWD3-203ENST00000377344 IGSF1Q8N6C5 1336 aa17.17■□□□□ 0.34
CBWD3-203ENST00000377344 PRKAR2BP31323 418 aa17.17■□□□□ 0.34
CBWD3-203ENST00000377344 MEX3CQ5U5Q3 659 aaKnown RBP17.17■□□□□ 0.34
CBWD3-203ENST00000377344 C8orf37Q96NL8 207 aa17.17■□□□□ 0.34
CBWD3-203ENST00000377344 RGPD1P0DJD0 1748 aa17.16■□□□□ 0.34
CBWD3-203ENST00000377344 NEFMP07197 916 aa17.16■□□□□ 0.34
CBWD3-203ENST00000377344 RUNDC1Q96C34 613 aa17.16■□□□□ 0.34
CBWD3-203ENST00000377344 RSPH6AQ9H0K4 717 aa17.16■□□□□ 0.34
CBWD3-203ENST00000377344 COL5A2P05997 1499 aaPredicted RBP17.16■□□□□ 0.34
CBWD3-203ENST00000377344 MAPK8IP3Q9UPT6 1336 aa17.16■□□□□ 0.34
CBWD3-203ENST00000377344 RGPD2P0DJD1 1756 aa17.15■□□□□ 0.34
CBWD3-203ENST00000377344 LRP6O75581 1613 aa17.15■□□□□ 0.34
CBWD3-203ENST00000377344 TOM1L2Q6ZVM7 507 aa17.14■□□□□ 0.34
CBWD3-203ENST00000377344 NGLY1Q96IV0 654 aa17.14■□□□□ 0.34
CBWD3-203ENST00000377344 WDR17Q8IZU2 1322 aa17.14■□□□□ 0.33
CBWD3-203ENST00000377344 PLCH1Q4KWH8 1693 aa17.14■□□□□ 0.33
CBWD3-203ENST00000377344 SALL2Q9Y467 1007 aaPredicted RBP17.14■□□□□ 0.33
CBWD3-203ENST00000377344 PLEKHF1Q96S99 279 aa17.13■□□□□ 0.33
CBWD3-203ENST00000377344 FAM208AQ9UK61 1670 aaKnown RBP17.12■□□□□ 0.33
CBWD3-203ENST00000377344 APAF1O14727 1248 aa17.12■□□□□ 0.33
CBWD3-203ENST00000377344 LARP1Q6PKG0 1096 aaKnown RBP17.12■□□□□ 0.33
CBWD3-203ENST00000377344 KDRP35968 1356 aa17.12■□□□□ 0.33
CBWD3-203ENST00000377344 NEUROD2Q15784 382 aa17.11■□□□□ 0.33
CBWD3-203ENST00000377344 TCP11L2Q8N4U5 519 aa17.11■□□□□ 0.33
CBWD3-203ENST00000377344 PHACTR3Q96KR7 559 aa17.1■□□□□ 0.33
CBWD3-203ENST00000377344 USP35Q9P2H5 1018 aa17.1■□□□□ 0.33
CBWD3-203ENST00000377344 RRP7AQ9Y3A4 280 aaKnown RBP17.1■□□□□ 0.33
CBWD3-203ENST00000377344 SLIT2O94813 1529 aa17.08■□□□□ 0.33
CBWD3-203ENST00000377344 CRB1P82279 1406 aa17.08■□□□□ 0.33
CBWD3-203ENST00000377344 RAPGEF4Q8WZA2 1011 aa17.08■□□□□ 0.33
CBWD3-203ENST00000377344 NWD2Q9ULI1 1742 aa17.08■□□□□ 0.32
CBWD3-203ENST00000377344 CARD10Q9BWT7 1032 aa17.07■□□□□ 0.32
CBWD3-203ENST00000377344 CCDC9Q9Y3X0 531 aaKnown RBP17.07■□□□□ 0.32
CBWD3-203ENST00000377344 NCAPD2Q15021 1401 aa17.07■□□□□ 0.32
CBWD3-203ENST00000377344 UNC5CLQ8IV45 518 aa17.07■□□□□ 0.32
CBWD3-203ENST00000377344 NRAPQ86VF7 1730 aa17.07■□□□□ 0.32
CBWD3-203ENST00000377344 USP21Q9UK80 565 aa17.06■□□□□ 0.32
CBWD3-203ENST00000377344 TMPOP42166 694 aaKnown RBP17.05■□□□□ 0.32
CBWD3-203ENST00000377344 FNBP4Q8N3X1 1017 aaPredicted RBP17.05■□□□□ 0.32
CBWD3-203ENST00000377344 TATP17735 454 aaPredicted RBP17.05■□□□□ 0.32
CBWD3-203ENST00000377344 RIPK4P57078 832 aa17.05■□□□□ 0.32
CBWD3-203ENST00000377344 BCL9LQ86UU0 1499 aa17.04■□□□□ 0.32
CBWD3-203ENST00000377344 AFF2P51816 1311 aa17.04■□□□□ 0.32
CBWD3-203ENST00000377344 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
CBWD3-203ENST00000377344 NFE2L2Q16236 605 aa17.04■□□□□ 0.32
CBWD3-203ENST00000377344 MTHFSDQ2M296 383 aaKnown RBP17.04■□□□□ 0.32
CBWD3-203ENST00000377344 MEGF6O75095 1541 aa17.03■□□□□ 0.32
CBWD3-203ENST00000377344 PLEKHO1Q53GL0 409 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-203ENST00000377344 GAS2L2Q8NHY3 880 aa17.03■□□□□ 0.32
CBWD3-203ENST00000377344 IL2RBP14784 551 aa17.02■□□□□ 0.31
CBWD3-203ENST00000377344 AMOTQ4VCS5 1084 aa17.02■□□□□ 0.31
CBWD3-203ENST00000377344 NGEFQ8N5V2 710 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms