RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 RGPD1P0DJD0 1748 aa13.99□□□□□ -0.17
PDPN-203ENST00000376061 SOX12O15370 315 aa13.98□□□□□ -0.17
PDPN-203ENST00000376061 MAP3K19Q56UN5 1328 aa13.98□□□□□ -0.17
PDPN-203ENST00000376061 ARHGEF10O15013 1369 aa13.98□□□□□ -0.17
PDPN-203ENST00000376061 PHLPP1O60346 1717 aa13.97□□□□□ -0.17
PDPN-203ENST00000376061 PPM1GO15355 546 aaPredicted RBP13.97□□□□□ -0.17
PDPN-203ENST00000376061 HNRNPUQ00839 825 aaKnown RBP eCLIP13.97□□□□□ -0.17
PDPN-203ENST00000376061 ADAMTS8Q9UP79 889 aa13.97□□□□□ -0.17
PDPN-203ENST00000376061 COL16A1Q07092 1604 aaPredicted RBP13.97□□□□□ -0.17
PDPN-203ENST00000376061 LMOD2Q6P5Q4 547 aa13.96□□□□□ -0.17
PDPN-203ENST00000376061 RTL1A6NKG5 1358 aa13.96□□□□□ -0.17
PDPN-203ENST00000376061 FLT4P35916 1363 aa13.96□□□□□ -0.17
PDPN-203ENST00000376061 KIF24Q5T7B8 1368 aa13.96□□□□□ -0.17
PDPN-203ENST00000376061 COL22A1Q8NFW1 1626 aaPredicted RBP13.95□□□□□ -0.18
PDPN-203ENST00000376061 DIAPH1O60610 1272 aaKnown RBP13.95□□□□□ -0.18
PDPN-203ENST00000376061 KCNH5Q8NCM2 988 aa13.95□□□□□ -0.18
PDPN-203ENST00000376061 ABCC6O95255 1503 aa13.94□□□□□ -0.18
PDPN-203ENST00000376061 COL18A1P39060 1754 aa13.93□□□□□ -0.18
PDPN-203ENST00000376061 RGPD5Q99666 1765 aa13.93□□□□□ -0.18
PDPN-203ENST00000376061 GCP02774 474 aa13.93□□□□□ -0.18
PDPN-203ENST00000376061 ZBED9Q6R2W3 1325 aa13.92□□□□□ -0.18
PDPN-203ENST00000376061 TOM1O60784 492 aa13.92□□□□□ -0.18
PDPN-203ENST00000376061 IL13P35225 146 aa13.92□□□□□ -0.18
PDPN-203ENST00000376061 NUDCQ9Y266 331 aa13.92□□□□□ -0.18
PDPN-203ENST00000376061 U2SURPO15042 1029 aaKnown RBP13.91□□□□□ -0.18
PDPN-203ENST00000376061 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
PDPN-203ENST00000376061 CENPBP07199 599 aaPredicted RBP13.91□□□□□ -0.18
PDPN-203ENST00000376061 U2AF1L5P0DN76 240 aaPredicted RBP13.91□□□□□ -0.18
PDPN-203ENST00000376061 HOXC9P31274 260 aa13.91□□□□□ -0.18
PDPN-203ENST00000376061 AMPHP49418 695 aa13.91□□□□□ -0.18
PDPN-203ENST00000376061 U2AF1Q01081 240 aaKnown RBP eCLIP13.91□□□□□ -0.18
PDPN-203ENST00000376061 EIF4A2Q14240 407 aaKnown RBP13.91□□□□□ -0.18
PDPN-203ENST00000376061 HSP90AB2PQ58FF8 381 aa13.91□□□□□ -0.18
PDPN-203ENST00000376061 CCDC146Q8IYE0 955 aa13.91□□□□□ -0.18
PDPN-203ENST00000376061 RGPD2P0DJD1 1756 aa13.91□□□□□ -0.18
PDPN-203ENST00000376061 CAMTA1Q9Y6Y1 1673 aa13.9□□□□□ -0.18
PDPN-203ENST00000376061 UBAP1LF5GYI3 381 aa13.9□□□□□ -0.18
PDPN-203ENST00000376061 ARHGEF25Q86VW2 580 aa13.9□□□□□ -0.18
PDPN-203ENST00000376061 CERKQ8TCT0 537 aa13.9□□□□□ -0.18
PDPN-203ENST00000376061 LMO7Q8WWI1 1683 aa13.89□□□□□ -0.19
PDPN-203ENST00000376061 FAM208AQ9UK61 1670 aaKnown RBP13.89□□□□□ -0.19
PDPN-203ENST00000376061 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
PDPN-203ENST00000376061 CABLES1Q8TDN4 633 aa13.89□□□□□ -0.19
PDPN-203ENST00000376061 CPDO75976 1380 aa13.89□□□□□ -0.19
PDPN-203ENST00000376061 IP6K1Q92551 441 aa13.88□□□□□ -0.19
PDPN-203ENST00000376061 PIP4K2BP78356 416 aa13.87□□□□□ -0.19
PDPN-203ENST00000376061 ZBTB7CA1YPR0 619 aa13.86□□□□□ -0.19
PDPN-203ENST00000376061 RUNDC1Q96C34 613 aa13.86□□□□□ -0.19
PDPN-203ENST00000376061 RSPH6AQ9H0K4 717 aa13.86□□□□□ -0.19
PDPN-203ENST00000376061 KIAA0232Q92628 1395 aa13.86□□□□□ -0.19
PDPN-203ENST00000376061 APAF1O14727 1248 aa13.85□□□□□ -0.19
PDPN-203ENST00000376061 ZC3H6P61129 1189 aaKnown RBP13.85□□□□□ -0.19
PDPN-203ENST00000376061 POLA2Q14181 598 aa13.85□□□□□ -0.19
PDPN-203ENST00000376061 LRRC59Q96AG4 307 aaKnown RBP13.85□□□□□ -0.19
PDPN-203ENST00000376061 PLEKHF1Q96S99 279 aa13.85□□□□□ -0.19
PDPN-203ENST00000376061 DLG5Q8TDM6 1919 aa13.85□□□□□ -0.19
PDPN-203ENST00000376061 IGSF1Q8N6C5 1336 aa13.85□□□□□ -0.19
PDPN-203ENST00000376061 MYCNP04198 464 aaPredicted RBP13.84□□□□□ -0.19
PDPN-203ENST00000376061 HMOX1P09601 288 aa13.84□□□□□ -0.19
PDPN-203ENST00000376061 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
PDPN-203ENST00000376061 KDRP35968 1356 aa13.84□□□□□ -0.19
PDPN-203ENST00000376061 NCAPD2Q15021 1401 aa13.84□□□□□ -0.19
PDPN-203ENST00000376061 FCHSD2O94868 740 aa13.83□□□□□ -0.19
PDPN-203ENST00000376061 PRKAR2BP31323 418 aa13.83□□□□□ -0.19
PDPN-203ENST00000376061 AEBP1Q8IUX7 1158 aa13.83□□□□□ -0.19
PDPN-203ENST00000376061 COL14A1Q05707 1796 aaKnown RBP13.83□□□□□ -0.2
PDPN-203ENST00000376061 TCP11L2Q8N4U5 519 aa13.83□□□□□ -0.2
PDPN-203ENST00000376061 LTV1Q96GA3 475 aaPredicted RBP13.83□□□□□ -0.2
PDPN-203ENST00000376061 SALL2Q9Y467 1007 aaPredicted RBP13.83□□□□□ -0.2
PDPN-203ENST00000376061 MAPK8IP3Q9UPT6 1336 aa13.82□□□□□ -0.2
PDPN-203ENST00000376061 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
PDPN-203ENST00000376061 EYA1Q99502 592 aa13.82□□□□□ -0.2
PDPN-203ENST00000376061 PNNQ9H307 717 aaKnown RBP13.82□□□□□ -0.2
PDPN-203ENST00000376061 AXIN2Q9Y2T1 843 aa13.82□□□□□ -0.2
PDPN-203ENST00000376061 PLCH1Q4KWH8 1693 aa13.81□□□□□ -0.2
PDPN-203ENST00000376061 ZNF521Q96K83 1311 aa13.81□□□□□ -0.2
PDPN-203ENST00000376061 HAP1P54257 671 aaPredicted RBP13.81□□□□□ -0.2
PDPN-203ENST00000376061 CHRNA2Q15822 529 aa13.81□□□□□ -0.2
PDPN-203ENST00000376061 NGEFQ8N5V2 710 aa13.81□□□□□ -0.2
PDPN-203ENST00000376061 ANKRD24Q8TF21 1146 aa13.81□□□□□ -0.2
PDPN-203ENST00000376061 ERBB3P21860 1342 aa13.8□□□□□ -0.2
PDPN-203ENST00000376061 PRDM11Q9NQV5 511 aa13.8□□□□□ -0.2
PDPN-203ENST00000376061 RRP7AQ9Y3A4 280 aaKnown RBP13.8□□□□□ -0.2
PDPN-203ENST00000376061 COL5A2P05997 1499 aaPredicted RBP13.79□□□□□ -0.2
PDPN-203ENST00000376061 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
PDPN-203ENST00000376061 NRAPQ86VF7 1730 aa13.78□□□□□ -0.2
PDPN-203ENST00000376061 TMPOP42166 694 aaKnown RBP13.78□□□□□ -0.2
PDPN-203ENST00000376061 USHBP1Q8N6Y0 703 aa13.78□□□□□ -0.2
PDPN-203ENST00000376061 NEFMP07197 916 aa13.77□□□□□ -0.21
PDPN-203ENST00000376061 PDE3BQ13370 1112 aa13.77□□□□□ -0.21
PDPN-203ENST00000376061 NBPF6Q5VWK0 638 aa13.77□□□□□ -0.21
PDPN-203ENST00000376061 NBPF4Q96M43 638 aa13.77□□□□□ -0.21
PDPN-203ENST00000376061 NEUROD2Q15784 382 aa13.76□□□□□ -0.21
PDPN-203ENST00000376061 NFE2L2Q16236 605 aa13.76□□□□□ -0.21
PDPN-203ENST00000376061 CCDC27Q2M243 656 aa13.76□□□□□ -0.21
PDPN-203ENST00000376061 LRRC37A3O60309 1634 aa13.76□□□□□ -0.21
PDPN-203ENST00000376061 JCADQ9P266 1359 aa13.76□□□□□ -0.21
PDPN-203ENST00000376061 PARP4Q9UKK3 1724 aaKnown RBP13.76□□□□□ -0.21
PDPN-203ENST00000376061 NWD2Q9ULI1 1742 aa13.76□□□□□ -0.21
PDPN-203ENST00000376061 WWC1Q8IX03 1113 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms