RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 RREB1Q92766 1687 aa33.07■■■□□ 2.88
C9orf47-202ENST00000375850 KTN1Q86UP2 1357 aaKnown RBP33.06■■■□□ 2.88
C9orf47-202ENST00000375850 AXIN2Q9Y2T1 843 aa33.05■■■□□ 2.88
C9orf47-202ENST00000375850 COL18A1P39060 1754 aa33.04■■■□□ 2.88
C9orf47-202ENST00000375850 AKAP12Q02952 1782 aa33.04■■■□□ 2.88
C9orf47-202ENST00000375850 ABCC6O95255 1503 aa33.02■■■□□ 2.88
C9orf47-202ENST00000375850 PLSCR1O15162 318 aa33.02■■■□□ 2.88
C9orf47-202ENST00000375850 CARD10Q9BWT7 1032 aa33.02■■■□□ 2.88
C9orf47-202ENST00000375850 BCL9O00512 1426 aa33.02■■■□□ 2.88
C9orf47-202ENST00000375850 LRRC37A3O60309 1634 aa33.01■■■□□ 2.87
C9orf47-202ENST00000375850 PEAK1Q9H792 1746 aa33■■■□□ 2.87
C9orf47-202ENST00000375850 CSB-PGBD3P0DP91 1061 aa33■■■□□ 2.87
C9orf47-202ENST00000375850 CARD11Q9BXL7 1154 aa33■■■□□ 2.87
C9orf47-202ENST00000375850 BCL11BQ9C0K0 894 aaPredicted RBP32.99■■■□□ 2.87
C9orf47-202ENST00000375850 NUP188Q5SRE5 1749 aa32.99■■■□□ 2.87
C9orf47-202ENST00000375850 USP31Q70CQ4 1352 aa32.97■■■□□ 2.87
C9orf47-202ENST00000375850 CCDC7Q96M83 1385 aa32.97■■■□□ 2.87
C9orf47-202ENST00000375850 NFAT5O94916 1531 aa32.97■■■□□ 2.87
C9orf47-202ENST00000375850 RGPD3A6NKT7 1758 aaPredicted RBP32.96■■■□□ 2.87
C9orf47-202ENST00000375850 RGPD4Q7Z3J3 1758 aa32.96■■■□□ 2.87
C9orf47-202ENST00000375850 SOX12O15370 315 aa32.95■■■□□ 2.87
C9orf47-202ENST00000375850 HDGFL2Q7Z4V5 671 aaPredicted RBP32.93■■■□□ 2.86
C9orf47-202ENST00000375850 PUS7Q96PZ0 661 aaKnown RBP32.93■■■□□ 2.86
C9orf47-202ENST00000375850 MARCH10Q8NA82 808 aaPredicted RBP32.92■■■□□ 2.86
C9orf47-202ENST00000375850 MON2Q7Z3U7 1717 aa32.91■■■□□ 2.86
C9orf47-202ENST00000375850 EXOC5O00471 708 aa32.91■■■□□ 2.86
C9orf47-202ENST00000375850 TONSLQ96HA7 1378 aa32.91■■■□□ 2.86
C9orf47-202ENST00000375850 WNK3Q9BYP7 1800 aa32.91■■■□□ 2.86
C9orf47-202ENST00000375850 SPON1Q9HCB6 807 aa32.9■■■□□ 2.86
C9orf47-202ENST00000375850 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.89■■■□□ 2.86
C9orf47-202ENST00000375850 TERF2IPQ9NYB0 399 aa32.88■■■□□ 2.85
C9orf47-202ENST00000375850 TMC1Q8TDI8 760 aa32.87■■■□□ 2.85
C9orf47-202ENST00000375850 USP54Q70EL1 1684 aa32.87■■■□□ 2.85
C9orf47-202ENST00000375850 CD163L1Q9NR16 1453 aa32.86■■■□□ 2.85
C9orf47-202ENST00000375850 EDC4Q6P2E9 1401 aaKnown RBP32.86■■■□□ 2.85
C9orf47-202ENST00000375850 KCNQ2O43526 872 aa32.86■■■□□ 2.85
C9orf47-202ENST00000375850 SLC24A1O60721 1099 aa32.86■■■□□ 2.85
C9orf47-202ENST00000375850 SBF2Q86WG5 1849 aa32.86■■■□□ 2.85
C9orf47-202ENST00000375850 TNS2Q63HR2 1409 aa32.85■■■□□ 2.85
C9orf47-202ENST00000375850 ERBB3P21860 1342 aa32.84■■■□□ 2.85
C9orf47-202ENST00000375850 NME9Q86XW9 330 aa32.83■■■□□ 2.85
C9orf47-202ENST00000375850 PPP1R1BQ9UD71 204 aaPredicted RBP32.82■■■□□ 2.84
C9orf47-202ENST00000375850 SLC12A5Q9H2X9 1139 aa32.81■■■□□ 2.84
C9orf47-202ENST00000375850 NINLQ9Y2I6 1382 aa32.81■■■□□ 2.84
C9orf47-202ENST00000375850 RGPD5Q99666 1765 aa32.81■■■□□ 2.84
C9orf47-202ENST00000375850 NLRP2Q9NX02 1062 aa32.79■■■□□ 2.84
C9orf47-202ENST00000375850 PTF1AQ7RTS3 328 aa32.78■■■□□ 2.84
C9orf47-202ENST00000375850 IL2RBP14784 551 aa32.77■■■□□ 2.84
C9orf47-202ENST00000375850 A0A1W2PP64 1363 aa32.77■■■□□ 2.84
C9orf47-202ENST00000375850 PROM2Q8N271 834 aa32.76■■■□□ 2.83
C9orf47-202ENST00000375850 ANO8Q9HCE9 1232 aaPredicted RBP32.76■■■□□ 2.83
C9orf47-202ENST00000375850 TXNRD1Q16881 649 aa32.75■■■□□ 2.83
C9orf47-202ENST00000375850 ANKRD24Q8TF21 1146 aa32.74■■■□□ 2.83
C9orf47-202ENST00000375850 DCAF8L1A6NGE4 600 aa32.73■■■□□ 2.83
C9orf47-202ENST00000375850 STK32BQ9NY57 414 aa32.72■■■□□ 2.83
C9orf47-202ENST00000375850 TESK2Q96S53 571 aa32.69■■■□□ 2.82
C9orf47-202ENST00000375850 IP6K1Q92551 441 aa32.68■■■□□ 2.82
C9orf47-202ENST00000375850 LTN1O94822 1766 aa32.68■■■□□ 2.82
C9orf47-202ENST00000375850 SLC15A2Q16348 729 aa32.67■■■□□ 2.82
C9orf47-202ENST00000375850 NHSQ6T4R5 1651 aa32.66■■■□□ 2.82
C9orf47-202ENST00000375850 CASZ1Q86V15 1759 aa32.66■■■□□ 2.82
C9orf47-202ENST00000375850 ST20-MTHFSA0A0A6YYL1 179 aa32.66■■■□□ 2.82
C9orf47-202ENST00000375850 COG3Q96JB2 828 aa32.65■■■□□ 2.82
C9orf47-202ENST00000375850 ACSBG1Q96GR2 724 aa32.61■■■□□ 2.81
C9orf47-202ENST00000375850 FAM208AQ9UK61 1670 aaKnown RBP32.59■■■□□ 2.81
C9orf47-202ENST00000375850 ANKRD36BQ8N2N9 1353 aa32.58■■■□□ 2.81
C9orf47-202ENST00000375850 ZBTB7AO95365 584 aa32.58■■■□□ 2.81
C9orf47-202ENST00000375850 YY1P25490 414 aa32.58■■■□□ 2.81
C9orf47-202ENST00000375850 PDGFDQ9GZP0 370 aaPredicted RBP32.57■■■□□ 2.8
C9orf47-202ENST00000375850 MTFR1LQ9H019 292 aa32.57■■■□□ 2.8
C9orf47-202ENST00000375850 PTGER2P43116 358 aa32.56■■■□□ 2.8
C9orf47-202ENST00000375850 MAP3K19Q56UN5 1328 aa32.55■■■□□ 2.8
C9orf47-202ENST00000375850 AMPHP49418 695 aa32.55■■■□□ 2.8
C9orf47-202ENST00000375850 TMF1P82094 1093 aa32.55■■■□□ 2.8
C9orf47-202ENST00000375850 HOXC9P31274 260 aa32.53■■■□□ 2.8
C9orf47-202ENST00000375850 RTL1A6NKG5 1358 aa32.53■■■□□ 2.8
C9orf47-202ENST00000375850 LTV1Q96GA3 475 aaPredicted RBP32.52■■■□□ 2.8
C9orf47-202ENST00000375850 ATF5Q9Y2D1 282 aaPredicted RBP32.52■■■□□ 2.8
C9orf47-202ENST00000375850 CDCA8Q53HL2 280 aa32.51■■■□□ 2.79
C9orf47-202ENST00000375850 SLC27A3Q5K4L6 730 aa32.51■■■□□ 2.79
C9orf47-202ENST00000375850 DDX54Q8TDD1 881 aaKnown RBP32.5■■■□□ 2.79
C9orf47-202ENST00000375850 TRIM26Q12899 539 aaPredicted RBP32.48■■■□□ 2.79
C9orf47-202ENST00000375850 PAPPAQ13219 1627 aa32.48■■■□□ 2.79
C9orf47-202ENST00000375850 USP47Q96K76 1375 aa32.47■■■□□ 2.79
C9orf47-202ENST00000375850 BTAF1O14981 1849 aa32.47■■■□□ 2.79
C9orf47-202ENST00000375850 CGNL1Q0VF96 1302 aa32.46■■■□□ 2.79
C9orf47-202ENST00000375850 SGIP1Q9BQI5 828 aa32.45■■■□□ 2.79
C9orf47-202ENST00000375850 MYOM1P52179 1685 aa32.44■■■□□ 2.78
C9orf47-202ENST00000375850 FYB1O15117 783 aa32.44■■■□□ 2.78
C9orf47-202ENST00000375850 ZCRB1Q8TBF4 217 aaKnown RBP32.44■■■□□ 2.78
C9orf47-202ENST00000375850 LRRC4BQ9NT99 713 aa32.43■■■□□ 2.78
C9orf47-202ENST00000375850 SMG6Q86US8 1419 aaKnown RBP32.43■■■□□ 2.78
C9orf47-202ENST00000375850 SLC16A10Q8TF71 515 aa32.42■■■□□ 2.78
C9orf47-202ENST00000375850 SYT17Q9BSW7 474 aa32.42■■■□□ 2.78
C9orf47-202ENST00000375850 FHDC1Q9C0D6 1143 aaPredicted RBP32.42■■■□□ 2.78
C9orf47-202ENST00000375850 ZNF827Q17R98 1081 aa32.4■■■□□ 2.78
C9orf47-202ENST00000375850 KIF24Q5T7B8 1368 aa32.4■■■□□ 2.78
C9orf47-202ENST00000375850 AKT1S1Q96B36 256 aa32.39■■■□□ 2.78
C9orf47-202ENST00000375850 ARXQ96QS3 562 aa32.39■■■□□ 2.78
C9orf47-202ENST00000375850 GGNBP2Q9H3C7 697 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms