RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 GCP02774 474 aa23.29■■□□□ 1.32
CLIC1-208ENST00000375784 PLSCR1O15162 318 aa23.27■■□□□ 1.32
CLIC1-208ENST00000375784 NLRP13Q86W25 1043 aa23.27■■□□□ 1.32
CLIC1-208ENST00000375784 TMC1Q8TDI8 760 aa23.27■■□□□ 1.32
CLIC1-208ENST00000375784 COL5A2P05997 1499 aaPredicted RBP23.27■■□□□ 1.32
CLIC1-208ENST00000375784 USP6P35125 1406 aa23.26■■□□□ 1.31
CLIC1-208ENST00000375784 OVOS2A0A0G2JMS6 1433 aa23.25■■□□□ 1.31
CLIC1-208ENST00000375784 OVOS2A0A0J9YW53 1432 aa23.25■■□□□ 1.31
CLIC1-208ENST00000375784 OVOS2Q6IE36 1432 aa23.25■■□□□ 1.31
CLIC1-208ENST00000375784 PARP4Q9UKK3 1724 aaKnown RBP23.25■■□□□ 1.31
CLIC1-208ENST00000375784 TMF1P82094 1093 aa23.25■■□□□ 1.31
CLIC1-208ENST00000375784 CRB1P82279 1406 aa23.25■■□□□ 1.31
CLIC1-208ENST00000375784 ANO8Q9HCE9 1232 aaPredicted RBP23.23■■□□□ 1.31
CLIC1-208ENST00000375784 NLRP6P59044 892 aa23.22■■□□□ 1.31
CLIC1-208ENST00000375784 HDGFL2Q7Z4V5 671 aaPredicted RBP23.22■■□□□ 1.31
CLIC1-208ENST00000375784 TERF2IPQ9NYB0 399 aa23.22■■□□□ 1.31
CLIC1-208ENST00000375784 KTN1Q86UP2 1357 aaKnown RBP23.22■■□□□ 1.31
CLIC1-208ENST00000375784 CDCA8Q53HL2 280 aa23.21■■□□□ 1.31
CLIC1-208ENST00000375784 SLC12A5Q9H2X9 1139 aa23.21■■□□□ 1.31
CLIC1-208ENST00000375784 CPSF1Q10570 1443 aaKnown RBP23.21■■□□□ 1.31
CLIC1-208ENST00000375784 PEAK1Q9H792 1746 aa23.21■■□□□ 1.31
CLIC1-208ENST00000375784 TTC21BQ7Z4L5 1316 aa23.2■■□□□ 1.3
CLIC1-208ENST00000375784 DDB1Q16531 1140 aa23.2■■□□□ 1.3
CLIC1-208ENST00000375784 BCL11BQ9C0K0 894 aaPredicted RBP23.2■■□□□ 1.3
CLIC1-208ENST00000375784 TTC21AQ8NDW8 1320 aa23.19■■□□□ 1.3
CLIC1-208ENST00000375784 RGPD3A6NKT7 1758 aaPredicted RBP23.19■■□□□ 1.3
CLIC1-208ENST00000375784 RGPD4Q7Z3J3 1758 aa23.19■■□□□ 1.3
CLIC1-208ENST00000375784 AATKQ6ZMQ8 1374 aa23.18■■□□□ 1.3
CLIC1-208ENST00000375784 ZBTB7CA1YPR0 619 aa23.18■■□□□ 1.3
CLIC1-208ENST00000375784 PTF1AQ7RTS3 328 aa23.18■■□□□ 1.3
CLIC1-208ENST00000375784 PDGFDQ9GZP0 370 aaPredicted RBP23.18■■□□□ 1.3
CLIC1-208ENST00000375784 PROM2Q8N271 834 aa23.17■■□□□ 1.3
CLIC1-208ENST00000375784 EIF4G2P78344 907 aaKnown RBP eCLIP23.16■■□□□ 1.31e-7■■■■■ 36.9
CLIC1-208ENST00000375784 TOM1L2Q6ZVM7 507 aa23.16■■□□□ 1.3
CLIC1-208ENST00000375784 CASZ1Q86V15 1759 aa23.16■■□□□ 1.3
CLIC1-208ENST00000375784 LRRC37A3O60309 1634 aa23.15■■□□□ 1.3
CLIC1-208ENST00000375784 ZBTB7AO95365 584 aa23.15■■□□□ 1.3
CLIC1-208ENST00000375784 PTGER2P43116 358 aa23.14■■□□□ 1.29
CLIC1-208ENST00000375784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.14■■□□□ 1.29
CLIC1-208ENST00000375784 MARCH10Q8NA82 808 aaPredicted RBP23.14■■□□□ 1.29
CLIC1-208ENST00000375784 BCL9O00512 1426 aa23.13■■□□□ 1.29
CLIC1-208ENST00000375784 SBF2Q86WG5 1849 aa23.12■■□□□ 1.29
CLIC1-208ENST00000375784 POTEDQ86YR6 584 aa23.12■■□□□ 1.29
CLIC1-208ENST00000375784 ZNF784Q8NCA9 323 aaPredicted RBP23.12■■□□□ 1.29
CLIC1-208ENST00000375784 SLIT3O75094 1523 aa23.12■■□□□ 1.29
CLIC1-208ENST00000375784 WDR17Q8IZU2 1322 aa23.11■■□□□ 1.29
CLIC1-208ENST00000375784 KCNH5Q8NCM2 988 aa23.11■■□□□ 1.29
CLIC1-208ENST00000375784 CDCA7Q9BWT1 371 aaPredicted RBP23.11■■□□□ 1.29
CLIC1-208ENST00000375784 ATF5Q9Y2D1 282 aaPredicted RBP23.11■■□□□ 1.29
CLIC1-208ENST00000375784 AXIN2Q9Y2T1 843 aa23.11■■□□□ 1.29
CLIC1-208ENST00000375784 CD163L1Q9NR16 1453 aa23.11■■□□□ 1.29
CLIC1-208ENST00000375784 AKAP12Q02952 1782 aa23.1■■□□□ 1.29
CLIC1-208ENST00000375784 STK32BQ9NY57 414 aa23.09■■□□□ 1.29
CLIC1-208ENST00000375784 A0A1W2PP64 1363 aa23.09■■□□□ 1.29
CLIC1-208ENST00000375784 EDC4Q6P2E9 1401 aaKnown RBP23.08■■□□□ 1.29
CLIC1-208ENST00000375784 HSPA5P11021 654 aaKnown RBP23.08■■□□□ 1.29
CLIC1-208ENST00000375784 TXNRD1Q16881 649 aa23.08■■□□□ 1.29
CLIC1-208ENST00000375784 MYOM1P52179 1685 aa23.07■■□□□ 1.28
CLIC1-208ENST00000375784 SLC15A2Q16348 729 aa23.07■■□□□ 1.28
CLIC1-208ENST00000375784 SYT17Q9BSW7 474 aa23.07■■□□□ 1.28
CLIC1-208ENST00000375784 NME9Q86XW9 330 aa23.06■■□□□ 1.28
CLIC1-208ENST00000375784 FHDC1Q9C0D6 1143 aaPredicted RBP23.06■■□□□ 1.28
CLIC1-208ENST00000375784 COL18A1P39060 1754 aa23.06■■□□□ 1.28
CLIC1-208ENST00000375784 ANKRD36BQ8N2N9 1353 aa23.05■■□□□ 1.28
CLIC1-208ENST00000375784 CARD10Q9BWT7 1032 aa23.05■■□□□ 1.28
CLIC1-208ENST00000375784 USP31Q70CQ4 1352 aa23.04■■□□□ 1.28
CLIC1-208ENST00000375784 PIK3C2AO00443 1686 aa23.04■■□□□ 1.28
CLIC1-208ENST00000375784 SOX12O15370 315 aa23.04■■□□□ 1.28
CLIC1-208ENST00000375784 ARHGEF25Q86VW2 580 aa23.04■■□□□ 1.28
CLIC1-208ENST00000375784 MTFR1LQ9H019 292 aa23.04■■□□□ 1.28
CLIC1-208ENST00000375784 MON2Q7Z3U7 1717 aa23.04■■□□□ 1.28
CLIC1-208ENST00000375784 EXOC5O00471 708 aa23.03■■□□□ 1.28
CLIC1-208ENST00000375784 SGIP1Q9BQI5 828 aa23.03■■□□□ 1.28
CLIC1-208ENST00000375784 CSB-PGBD3P0DP91 1061 aa23.02■■□□□ 1.28
CLIC1-208ENST00000375784 WNK3Q9BYP7 1800 aa23.01■■□□□ 1.27
CLIC1-208ENST00000375784 POLR3GLQ9BT43 218 aa23.01■■□□□ 1.27
CLIC1-208ENST00000375784 COG3Q96JB2 828 aa22.99■■□□□ 1.27
CLIC1-208ENST00000375784 UTRNP46939 3433 aa22.97■■□□□ 1.27
CLIC1-208ENST00000375784 CCDC7Q96M83 1385 aa22.97■■□□□ 1.27
CLIC1-208ENST00000375784 SENP3-EIF4A1A0A087X0R7 540 aa22.96■■□□□ 1.27
CLIC1-208ENST00000375784 C1QTNF8P60827 252 aa22.96■■□□□ 1.27
CLIC1-208ENST00000375784 ARXQ96QS3 562 aa22.96■■□□□ 1.27
CLIC1-208ENST00000375784 TNS2Q63HR2 1409 aa22.94■■□□□ 1.26
CLIC1-208ENST00000375784 MAP3K5Q99683 1374 aa22.93■■□□□ 1.26
CLIC1-208ENST00000375784 FYB1O15117 783 aa22.93■■□□□ 1.26
CLIC1-208ENST00000375784 ACSBG1Q96GR2 724 aa22.93■■□□□ 1.26
CLIC1-208ENST00000375784 CARD14Q9BXL6 1004 aa22.91■■□□□ 1.26
CLIC1-208ENST00000375784 GGNBP2Q9H3C7 697 aa22.91■■□□□ 1.26
CLIC1-208ENST00000375784 NFAT5O94916 1531 aa22.91■■□□□ 1.26
CLIC1-208ENST00000375784 RGPD5Q99666 1765 aa22.91■■□□□ 1.26
CLIC1-208ENST00000375784 NHSQ6T4R5 1651 aa22.89■■□□□ 1.25
CLIC1-208ENST00000375784 USP54Q70EL1 1684 aa22.89■■□□□ 1.25
CLIC1-208ENST00000375784 ABCC6O95255 1503 aa22.88■■□□□ 1.25
CLIC1-208ENST00000375784 PAPPAQ13219 1627 aa22.88■■□□□ 1.25
CLIC1-208ENST00000375784 CHD4Q14839 1912 aa22.87■■□□□ 1.25
CLIC1-208ENST00000375784 GPR162Q16538 588 aa22.87■■□□□ 1.25
CLIC1-208ENST00000375784 ZNF827Q17R98 1081 aa22.87■■□□□ 1.25
CLIC1-208ENST00000375784 NSD3Q9BZ95 1437 aa22.87■■□□□ 1.25
CLIC1-208ENST00000375784 CGNL1Q0VF96 1302 aa22.86■■□□□ 1.25
CLIC1-208ENST00000375784 NLRP2Q9NX02 1062 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms