RNA–Protein interactions for RNA: ENST00000375244.7

TNXB-201, Transcript of tenascin XB, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNXB, Length 13,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-201ENST00000375244 STK11IPQ8N1F8 1099 aa12.55□□□□□ -0.4
TNXB-201ENST00000375244 BRD4O60885 1362 aaPredicted RBP12.54□□□□□ -0.4
TNXB-201ENST00000375244 EPB41L2O43491 1005 aaKnown RBP12.54□□□□□ -0.4
TNXB-201ENST00000375244 KRT85P78386 507 aa12.54□□□□□ -0.4
TNXB-201ENST00000375244 ERICH4A6NGS2 130 aa12.54□□□□□ -0.4
TNXB-201ENST00000375244 TRIM21P19474 475 aaKnown RBP12.54□□□□□ -0.4
TNXB-201ENST00000375244 CCDC102AQ96A19 550 aa12.54□□□□□ -0.4
TNXB-201ENST00000375244 CFAP45Q9UL16 551 aa12.54□□□□□ -0.4
TNXB-201ENST00000375244 GRPEL1Q9HAV7 217 aa12.54□□□□□ -0.4
TNXB-201ENST00000375244 STK3Q13188 491 aa12.53□□□□□ -0.4
TNXB-201ENST00000375244 CNNM1Q9NRU3 951 aa12.53□□□□□ -0.4
TNXB-201ENST00000375244 RRBP1Q9P2E9 1410 aaKnown RBP12.53□□□□□ -0.4
TNXB-201ENST00000375244 NEBLO76041 1014 aa12.53□□□□□ -0.4
TNXB-201ENST00000375244 GIMAP7Q8NHV1 300 aa12.53□□□□□ -0.4
TNXB-201ENST00000375244 CCDC148Q8NFR7 591 aa12.53□□□□□ -0.4
TNXB-201ENST00000375244 CEP57L1Q8IYX8 460 aa12.53□□□□□ -0.4
TNXB-201ENST00000375244 CCDC97Q96F63 343 aaPredicted RBP12.52□□□□□ -0.4
TNXB-201ENST00000375244 CCDC7Q96M83 1385 aa12.52□□□□□ -0.4
TNXB-201ENST00000375244 GOLGA6L10A0A0M3HER8 536 aa12.52□□□□□ -0.4
TNXB-201ENST00000375244 MAP9Q49MG5 647 aa12.52□□□□□ -0.4
TNXB-201ENST00000375244 SOGA3Q5TF21 947 aa12.52□□□□□ -0.41
TNXB-201ENST00000375244 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
TNXB-201ENST00000375244 NF2P35240 595 aa12.52□□□□□ -0.41
TNXB-201ENST00000375244 TAF4BQ92750 862 aa12.52□□□□□ -0.41
TNXB-201ENST00000375244 GCC1Q96CN9 775 aa12.52□□□□□ -0.41
TNXB-201ENST00000375244 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.41
TNXB-201ENST00000375244 RRP9O43818 475 aaKnown RBP12.51□□□□□ -0.41
TNXB-201ENST00000375244 SPATA32Q96LK8 384 aa12.51□□□□□ -0.41
TNXB-201ENST00000375244 LARP1BQ659C4 914 aaKnown RBP12.51□□□□□ -0.41
TNXB-201ENST00000375244 NUP133Q8WUM0 1156 aa12.51□□□□□ -0.41
TNXB-201ENST00000375244 ARHGAP29Q52LW3 1261 aa12.51□□□□□ -0.41
TNXB-201ENST00000375244 ZNF397Q8NF99 534 aaPredicted RBP12.51□□□□□ -0.41
TNXB-201ENST00000375244 C1orf115Q9H7X2 142 aa12.51□□□□□ -0.41
TNXB-201ENST00000375244 NUTM2GQ5VZR2 741 aa12.51□□□□□ -0.41
TNXB-201ENST00000375244 SRCIN1Q9C0H9 1055 aa12.51□□□□□ -0.41
TNXB-201ENST00000375244 SSBP05455 408 aaKnown RBP eCLIP12.51□□□□□ -0.41
TNXB-201ENST00000375244 EIF5P55010 431 aaKnown RBP12.51□□□□□ -0.41
TNXB-201ENST00000375244 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
TNXB-201ENST00000375244 FYCO1Q9BQS8 1478 aa12.51□□□□□ -0.41
TNXB-201ENST00000375244 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
TNXB-201ENST00000375244 ANAPC15P60006 121 aa12.5□□□□□ -0.41
TNXB-201ENST00000375244 K7ELQ4 463 aaPredicted RBP12.5□□□□□ -0.41
TNXB-201ENST00000375244 MAP2K1Q02750 393 aaPredicted RBP12.5□□□□□ -0.41
TNXB-201ENST00000375244 CCDC57Q2TAC2 916 aa12.5□□□□□ -0.41
TNXB-201ENST00000375244 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
TNXB-201ENST00000375244 CABP2Q9NPB3 220 aa12.5□□□□□ -0.41
TNXB-201ENST00000375244 NOB1Q9ULX3 412 aaKnown RBP12.5□□□□□ -0.41
TNXB-201ENST00000375244 MPNDQ8N594 471 aa12.5□□□□□ -0.41
TNXB-201ENST00000375244 ABTB2Q8N961 1025 aa12.5□□□□□ -0.41
TNXB-201ENST00000375244 CCT4P50991 539 aaKnown RBP12.5□□□□□ -0.41
TNXB-201ENST00000375244 UBAC1Q9BSL1 405 aa12.5□□□□□ -0.41
TNXB-201ENST00000375244 UPF3BQ9BZI7 483 aaKnown RBP12.5□□□□□ -0.41
TNXB-201ENST00000375244 ADAMTS8Q9UP79 889 aa12.5□□□□□ -0.41
TNXB-201ENST00000375244 UBXN4Q92575 508 aa12.49□□□□□ -0.41
TNXB-201ENST00000375244 PDZRN3Q9UPQ7 1066 aa12.49□□□□□ -0.41
TNXB-201ENST00000375244 MYOM3Q5VTT5 1437 aa12.49□□□□□ -0.41
TNXB-201ENST00000375244 FAM177BA6PVY3 158 aa12.49□□□□□ -0.41
TNXB-201ENST00000375244 PPP1R12BO60237 982 aaPredicted RBP12.49□□□□□ -0.41
TNXB-201ENST00000375244 JPH4Q96JJ6 628 aa12.49□□□□□ -0.41
TNXB-201ENST00000375244 CRACR2AQ9BSW2 395 aa12.49□□□□□ -0.41
TNXB-201ENST00000375244 CEP131Q9UPN4 1083 aa12.49□□□□□ -0.41
TNXB-201ENST00000375244 STAMBPO95630 424 aa12.49□□□□□ -0.41
TNXB-201ENST00000375244 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.49□□□□□ -0.41
TNXB-201ENST00000375244 KIF2AO00139 706 aaPredicted RBP12.49□□□□□ -0.41
TNXB-201ENST00000375244 SMTNL1A8MU46 457 aa12.49□□□□□ -0.41
TNXB-201ENST00000375244 GPRASP1Q5JY77 1395 aa12.49□□□□□ -0.41
TNXB-201ENST00000375244 TMCO3Q6UWJ1 677 aa12.48□□□□□ -0.41
TNXB-201ENST00000375244 MPHOSPH8Q99549 860 aa12.48□□□□□ -0.41
TNXB-201ENST00000375244 ZSCAN25Q6NSZ9 544 aa12.48□□□□□ -0.41
TNXB-201ENST00000375244 WASF1Q92558 559 aa12.48□□□□□ -0.41
TNXB-201ENST00000375244 CEP63Q96MT8 703 aa12.48□□□□□ -0.41
TNXB-201ENST00000375244 NUP62CLQ9H1M0 184 aa12.48□□□□□ -0.41
TNXB-201ENST00000375244 SUPT6HQ7KZ85 1726 aaKnown RBP12.48□□□□□ -0.41
TNXB-201ENST00000375244 SHTN1A0MZ66 631 aa12.48□□□□□ -0.41
TNXB-201ENST00000375244 DNAI2Q9GZS0 605 aa12.48□□□□□ -0.41
TNXB-201ENST00000375244 SCAPERQ9BY12 1400 aa12.48□□□□□ -0.41
TNXB-201ENST00000375244 MPHOSPH10O00566 681 aaKnown RBP12.48□□□□□ -0.41
TNXB-201ENST00000375244 MCM3P25205 808 aa12.48□□□□□ -0.41
TNXB-201ENST00000375244 ARHGAP5Q13017 1502 aa12.48□□□□□ -0.41
TNXB-201ENST00000375244 CTNNA3Q9UI47 895 aa12.47□□□□□ -0.41
TNXB-201ENST00000375244 NLRP6P59044 892 aa12.47□□□□□ -0.41
TNXB-201ENST00000375244 SPA17Q15506 151 aa12.47□□□□□ -0.41
TNXB-201ENST00000375244 TDO2P48775 406 aa12.47□□□□□ -0.41
TNXB-201ENST00000375244 CETN2P41208 172 aa12.47□□□□□ -0.41
TNXB-201ENST00000375244 HDGFL1Q5TGJ6 251 aa12.47□□□□□ -0.41
TNXB-201ENST00000375244 AACSQ86V21 672 aa12.47□□□□□ -0.41
TNXB-201ENST00000375244 PDE3AQ14432 1141 aa12.46□□□□□ -0.41
TNXB-201ENST00000375244 GGNBP2Q9H3C7 697 aa12.46□□□□□ -0.41
TNXB-201ENST00000375244 CFAP100Q494V2 611 aa12.46□□□□□ -0.41
TNXB-201ENST00000375244 SIL1Q9H173 461 aa12.46□□□□□ -0.41
TNXB-201ENST00000375244 RBM5P52756 815 aaKnown RBP eCLIP12.46□□□□□ -0.41
TNXB-201ENST00000375244 SFPQP23246 707 aaKnown RBP eCLIP12.46□□□□□ -0.41
TNXB-201ENST00000375244 BLOC1S2Q6QNY1 142 aa12.46□□□□□ -0.41
TNXB-201ENST00000375244 SEC63Q9UGP8 760 aaKnown RBP12.46□□□□□ -0.42
TNXB-201ENST00000375244 ZNF76P36508 570 aa12.46□□□□□ -0.42
TNXB-201ENST00000375244 PDIA4P13667 645 aaKnown RBP12.46□□□□□ -0.42
TNXB-201ENST00000375244 MTHFSP49914 203 aa12.46□□□□□ -0.42
TNXB-201ENST00000375244 LUZP1Q86V48 1076 aa12.46□□□□□ -0.42
TNXB-201ENST00000375244 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.42
TNXB-201ENST00000375244 PHF23Q9BUL5 403 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms