RNA–Protein interactions for RNA: ENST00000374688.5

TMEM38B-201, Transcript of transmembrane protein 38B, humanhuman

TSL 2 BASIC

Gene TMEM38B, Length 3,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-201ENST00000374688 GPR37O15354 613 aa4.84□□□□□ -1.64
TMEM38B-201ENST00000374688 CCDC172P0C7W6 258 aa4.84□□□□□ -1.64
TMEM38B-201ENST00000374688 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.84□□□□□ -1.64
TMEM38B-201ENST00000374688 C1orf131Q8NDD1 294 aaKnown RBP4.84□□□□□ -1.64
TMEM38B-201ENST00000374688 R3HCC1Q9Y3T6 440 aaKnown RBP4.84□□□□□ -1.64
TMEM38B-201ENST00000374688 DYNC1I1O14576 645 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 TPM3P06753 285 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 CASQ1P31415 396 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 IGBP1P78318 339 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 CBX1P83916 185 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 CCDC146Q8IYE0 955 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 UBXN4Q92575 508 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 KIAA1522Q9P206 1035 aaPredicted RBP4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 IVNS1ABPQ9Y6Y0 642 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 UQCRHLA0A096LP55 91 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 UQCRHP07919 91 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 XRCC6P12956 609 aaKnown RBP eCLIP4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 MAF1Q9H063 256 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 IGSF5Q9NSI5 407 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 POGKQ9P215 609 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 G3BP2Q9UN86 482 aaKnown RBP4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 IPO7O95373 1038 aaKnown RBP4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 ICE2Q659A1 982 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 MAMSTRQ6ZN01 415 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 GPATCH3Q96I76 525 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 TIGD1Q96MW7 591 aa4.83□□□□□ -1.64
TMEM38B-201ENST00000374688 HMMRO75330 724 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 OFD1O75665 1012 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 TCF3P15923 654 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 BIRC2Q13490 618 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 CC2D1AQ6P1N0 951 aaPredicted RBP4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 TTC13Q8NBP0 860 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 NUCKS1Q9H1E3 243 aaKnown RBP4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 PDZRN3Q9UPQ7 1066 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 CARNS1A5YM72 827 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 PDE6BP35913 854 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 MRE11P49959 708 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 GYS2P54840 703 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 RSPH9Q9H1X1 276 aaPredicted RBP4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 SYNPO2Q9UMS6 1093 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 LRRC27Q9C0I9 530 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 EFCC1Q9HA90 598 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 KIF3AQ9Y496 699 aa4.82□□□□□ -1.64
TMEM38B-201ENST00000374688 ZMYND10O75800 440 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 FLT3P36888 993 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 GTF2A1P52655 376 aaPredicted RBP4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 DDX10Q13206 875 aaKnown RBP4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 CCAR1Q8IX12 1150 aaKnown RBP4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 CXorf56Q9H5V9 222 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 MAP3K20Q9NYL2 800 aaKnown RBP4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 CHPF2Q9P2E5 772 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 U2AF1L5P0DN76 240 aaPredicted RBP4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 LMNB1P20700 586 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 SLC4A3P48751 1232 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 U2AF1Q01081 240 aaKnown RBP eCLIP4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 E2F4Q16254 413 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 STK11IPQ8N1F8 1099 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 TMUB1Q9BVT8 246 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 IRF2BPLQ9H1B7 796 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 JADE2Q9NQC1 790 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 ABCF2Q9UG63 623 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 FAN1Q9Y2M0 1017 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 PSMC1P62191 440 aaKnown RBP4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 PAGR1Q9BTK6 254 aa4.81□□□□□ -1.64
TMEM38B-201ENST00000374688 A6NJR5 290 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 SOCS7O14512 581 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 FAM200BP0CF97 657 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 SETSIPP0DME0 302 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 NAT1P18440 290 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 UVSSAQ2YD98 709 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 C16orf87Q6PH81 154 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 SMC4Q9NTJ3 1288 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 BOLA1Q9Y3E2 137 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 GOLGA6L6A8MZA4 724 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 PPP1R12AO14974 1030 aaPredicted RBP4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 CCP110O43303 1012 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 TNNT1P13805 278 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 PAX7P23759 505 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 LRCH2Q5VUJ6 765 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 DPH6Q7L8W6 267 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 OGFOD1Q8N543 542 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 RBM46Q8TBY0 533 aaKnown RBP4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 CCDC34Q96HJ3 373 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 PANK2Q9BZ23 570 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 NRBP1Q9UHY1 535 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 CTAGE5O15320 804 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 HTATSF1O43719 755 aaKnown RBP4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 EIF3JO75822 258 aaKnown RBP4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 CCDC175P0C221 793 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 ABCD1P33897 745 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 POU5F1Q01860 360 aaKnown RBP4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 PSMD2Q13200 908 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 PAF1Q8N7H5 531 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 MNS1Q8NEH6 495 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 CCDC47Q96A33 483 aaKnown RBP4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 CABP2Q9NPB3 220 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 DIS3Q9Y2L1 958 aaKnown RBP4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 IPO5O00410 1097 aaKnown RBP4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 CCT2P78371 535 aaKnown RBP4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 FAM160A1Q05DH4 1040 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms