RNA–Protein interactions for RNA: ENST00000373157.8

COL6A5-203, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 1,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-203ENST00000373157 BRICD5Q6PL45 260 aa5.31□□□□□ -1.56
COL6A5-203ENST00000373157 PRM3Q9NNZ6 103 aa5.31□□□□□ -1.56
COL6A5-203ENST00000373157 SCARF1Q14162 830 aa5.3□□□□□ -1.56
COL6A5-203ENST00000373157 WWC1Q8IX03 1113 aa5.3□□□□□ -1.56
COL6A5-203ENST00000373157 CCDC9Q9Y3X0 531 aaKnown RBP5.3□□□□□ -1.56
COL6A5-203ENST00000373157 ATP6V1AP38606 617 aa5.29□□□□□ -1.56
COL6A5-203ENST00000373157 MARSP56192 900 aaKnown RBP5.29□□□□□ -1.56
COL6A5-203ENST00000373157 CTDSPL2Q05D32 466 aa5.29□□□□□ -1.56
COL6A5-203ENST00000373157 FUT2Q10981 343 aa5.29□□□□□ -1.56
COL6A5-203ENST00000373157 MTMR2Q13614 643 aa5.29□□□□□ -1.56
COL6A5-203ENST00000373157 GJD4Q96KN9 370 aaPredicted RBP5.29□□□□□ -1.56
COL6A5-203ENST00000373157 POM121CA8CG34 1229 aa5.29□□□□□ -1.56
COL6A5-203ENST00000373157 PPFIA3O75145 1194 aa5.29□□□□□ -1.56
COL6A5-203ENST00000373157 MMP16P51512 607 aa5.29□□□□□ -1.56
COL6A5-203ENST00000373157 TSC1Q92574 1164 aa5.29□□□□□ -1.56
COL6A5-203ENST00000373157 HMX1Q9NP08 348 aaPredicted RBP5.29□□□□□ -1.56
COL6A5-203ENST00000373157 PRDM9Q9NQV7 894 aa5.29□□□□□ -1.56
COL6A5-203ENST00000373157 CDK11AQ9UQ88 783 aaPredicted RBP5.29□□□□□ -1.56
COL6A5-203ENST00000373157 C6orf229H3BNL8 230 aa5.28□□□□□ -1.56
COL6A5-203ENST00000373157 ARHGEF15O94989 841 aa5.28□□□□□ -1.56
COL6A5-203ENST00000373157 CDK11BP21127 795 aaKnown RBP5.28□□□□□ -1.56
COL6A5-203ENST00000373157 GRIPAP1Q4V328 841 aa5.28□□□□□ -1.56
COL6A5-203ENST00000373157 ZNF385CQ66K41 422 aaPredicted RBP5.28□□□□□ -1.56
COL6A5-203ENST00000373157 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
COL6A5-203ENST00000373157 NDUFB9Q9Y6M9 179 aa5.28□□□□□ -1.56
COL6A5-203ENST00000373157 WASF2Q9Y6W5 498 aa5.28□□□□□ -1.56
COL6A5-203ENST00000373157 CFAP99D6REC4 459 aa5.27□□□□□ -1.57
COL6A5-203ENST00000373157 PDIA4P13667 645 aaKnown RBP5.27□□□□□ -1.57
COL6A5-203ENST00000373157 SKOR1P84550 965 aa5.27□□□□□ -1.57
COL6A5-203ENST00000373157 HELBQ8NG08 1087 aaPredicted RBP5.27□□□□□ -1.57
COL6A5-203ENST00000373157 LRRN4Q8WUT4 740 aa5.27□□□□□ -1.57
COL6A5-203ENST00000373157 SYMPKQ92797 1274 aaKnown RBP5.27□□□□□ -1.57
COL6A5-203ENST00000373157 CALR3Q96L12 384 aaKnown RBP5.27□□□□□ -1.57
COL6A5-203ENST00000373157 TRIM34Q9BYJ4 488 aa5.27□□□□□ -1.57
COL6A5-203ENST00000373157 SHROOM4Q9ULL8 1493 aa5.27□□□□□ -1.57
COL6A5-203ENST00000373157 K7ELQ4 463 aaPredicted RBP5.27□□□□□ -1.57
COL6A5-203ENST00000373157 SIAH2O43255 324 aa5.27□□□□□ -1.57
COL6A5-203ENST00000373157 IRF5Q13568 498 aa5.27□□□□□ -1.57
COL6A5-203ENST00000373157 MRPL14Q6P1L8 145 aaKnown RBP5.27□□□□□ -1.57
COL6A5-203ENST00000373157 GLMNQ92990 594 aa5.27□□□□□ -1.57
COL6A5-203ENST00000373157 SLC27A5Q9Y2P5 690 aa5.27□□□□□ -1.57
COL6A5-203ENST00000373157 KRT76Q01546 638 aa5.26□□□□□ -1.57
COL6A5-203ENST00000373157 CNTNAP3BQ96NU0 1288 aa5.26□□□□□ -1.57
COL6A5-203ENST00000373157 SPOCK3Q9BQ16 436 aa5.26□□□□□ -1.57
COL6A5-203ENST00000373157 CNTNAP3Q9BZ76 1288 aa5.26□□□□□ -1.57
COL6A5-203ENST00000373157 KRTAP4-8A0A0G2JLE6 195 aa5.25□□□□□ -1.57
COL6A5-203ENST00000373157 GPR37L1O60883 481 aa5.25□□□□□ -1.57
COL6A5-203ENST00000373157 SVOPQ8N4V2 548 aa5.25□□□□□ -1.57
COL6A5-203ENST00000373157 ZBTB7CA1YPR0 619 aa5.24□□□□□ -1.57
COL6A5-203ENST00000373157 PRR7Q8TB68 274 aa5.24□□□□□ -1.57
COL6A5-203ENST00000373157 EPS8L1Q8TE68 723 aa5.24□□□□□ -1.57
COL6A5-203ENST00000373157 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
COL6A5-203ENST00000373157 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
COL6A5-203ENST00000373157 PLA2G4EQ3MJ16 856 aa5.24□□□□□ -1.57
COL6A5-203ENST00000373157 PER1O15534 1290 aaPredicted RBP5.23□□□□□ -1.57
COL6A5-203ENST00000373157 SLURP2P0DP57 97 aa5.23□□□□□ -1.57
COL6A5-203ENST00000373157 VAC14Q08AM6 782 aa5.23□□□□□ -1.57
COL6A5-203ENST00000373157 WASHC4Q2M389 1173 aa5.23□□□□□ -1.57
COL6A5-203ENST00000373157 Q3C1V9 767 aa5.23□□□□□ -1.57
COL6A5-203ENST00000373157 HDGFL1Q5TGJ6 251 aa5.23□□□□□ -1.57
COL6A5-203ENST00000373157 RETREG3Q86VR2 466 aa5.23□□□□□ -1.57
COL6A5-203ENST00000373157 ADAMTS19Q8TE59 1207 aa5.23□□□□□ -1.57
COL6A5-203ENST00000373157 DXOO77932 396 aaKnown RBP5.22□□□□□ -1.57
COL6A5-203ENST00000373157 NR6A1Q15406 480 aa5.22□□□□□ -1.57
COL6A5-203ENST00000373157 PURBQ96QR8 312 aaKnown RBP5.21□□□□□ -1.57
COL6A5-203ENST00000373157 SOBPA7XYQ1 873 aa5.21□□□□□ -1.58
COL6A5-203ENST00000373157 MAN1A2O60476 641 aa5.21□□□□□ -1.58
COL6A5-203ENST00000373157 PROCP04070 461 aa5.21□□□□□ -1.58
COL6A5-203ENST00000373157 HSP90B1P14625 803 aaKnown RBP5.21□□□□□ -1.58
COL6A5-203ENST00000373157 RETREG2Q8NC44 543 aa5.21□□□□□ -1.58
COL6A5-203ENST00000373157 GALNT6Q8NCL4 622 aa5.21□□□□□ -1.58
COL6A5-203ENST00000373157 EHBP1Q8NDI1 1231 aa5.21□□□□□ -1.58
COL6A5-203ENST00000373157 PHF20L1A8MW92 1017 aa5.2□□□□□ -1.58
COL6A5-203ENST00000373157 RNF19BQ6ZMZ0 732 aa5.2□□□□□ -1.58
COL6A5-203ENST00000373157 GPR161Q8N6U8 529 aaKnown RBP5.2□□□□□ -1.58
COL6A5-203ENST00000373157 NANOS1Q8WY41 292 aaKnown RBP5.2□□□□□ -1.58
COL6A5-203ENST00000373157 TRAIPQ9BWF2 469 aa5.2□□□□□ -1.58
COL6A5-203ENST00000373157 LOC105371045A0A1W2PR82 267 aa5.19□□□□□ -1.58
COL6A5-203ENST00000373157 PPP1R15AO75807 674 aaPredicted RBP5.19□□□□□ -1.58
COL6A5-203ENST00000373157 MPNDQ8N594 471 aa5.19□□□□□ -1.58
COL6A5-203ENST00000373157 DCAF5Q96JK2 942 aa5.19□□□□□ -1.58
COL6A5-203ENST00000373157 COL25A1Q9BXS0 654 aaPredicted RBP5.19□□□□□ -1.58
COL6A5-203ENST00000373157 RFX1P22670 979 aa5.19□□□□□ -1.58
COL6A5-203ENST00000373157 DESI1Q6ICB0 168 aa5.19□□□□□ -1.58
COL6A5-203ENST00000373157 LYPD8Q6UX82 237 aa5.19□□□□□ -1.58
COL6A5-203ENST00000373157 ALG2Q9H553 416 aa5.19□□□□□ -1.58
COL6A5-203ENST00000373157 CFAP70Q5T0N1 1121 aa5.18□□□□□ -1.58
COL6A5-203ENST00000373157 WHAMMQ8TF30 809 aa5.18□□□□□ -1.58
COL6A5-203ENST00000373157 USB1Q9BQ65 265 aaKnown RBP5.18□□□□□ -1.58
COL6A5-203ENST00000373157 ACIN1Q9UKV3 1341 aaKnown RBP5.18□□□□□ -1.58
COL6A5-203ENST00000373157 ITGB2P05107 769 aa5.17□□□□□ -1.58
COL6A5-203ENST00000373157 CCDC24Q8N4L8 307 aa5.17□□□□□ -1.58
COL6A5-203ENST00000373157 PBXIP1Q96AQ6 731 aa5.17□□□□□ -1.58
COL6A5-203ENST00000373157 PPP1R12CQ9BZL4 782 aa5.17□□□□□ -1.58
COL6A5-203ENST00000373157 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.16□□□□□ -1.58
COL6A5-203ENST00000373157 PALM3A6NDB9 673 aaPredicted RBP5.16□□□□□ -1.58
COL6A5-203ENST00000373157 TIMP2P16035 220 aa5.16□□□□□ -1.58
COL6A5-203ENST00000373157 SOX11P35716 441 aa5.16□□□□□ -1.58
COL6A5-203ENST00000373157 SEMA3FQ13275 785 aa5.16□□□□□ -1.58
COL6A5-203ENST00000373157 AEBP1Q8IUX7 1158 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms