RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 AXIN2Q9Y2T1 843 aa34.59■■■■□ 3.13
C9orf50-201ENST00000372478 GJD4Q96KN9 370 aaPredicted RBP34.59■■■■□ 3.13
C9orf50-201ENST00000372478 GLI3P10071 1580 aa34.58■■■■□ 3.13
C9orf50-201ENST00000372478 EVA1CP58658 441 aa34.58■■■■□ 3.13
C9orf50-201ENST00000372478 COL5A2P05997 1499 aaPredicted RBP34.57■■■■□ 3.12
C9orf50-201ENST00000372478 PER1O15534 1290 aaPredicted RBP34.55■■■■□ 3.12
C9orf50-201ENST00000372478 MAP3K19Q56UN5 1328 aa34.54■■■■□ 3.12
C9orf50-201ENST00000372478 RRS1Q15050 365 aaKnown RBP34.54■■■■□ 3.12
C9orf50-201ENST00000372478 ABCC6O95255 1503 aa34.53■■■■□ 3.12
C9orf50-201ENST00000372478 NSD2O96028 1365 aa34.53■■■■□ 3.12
C9orf50-201ENST00000372478 AMER1Q5JTC6 1135 aaPredicted RBP34.52■■■■□ 3.12
C9orf50-201ENST00000372478 LARP1Q6PKG0 1096 aaKnown RBP34.52■■■■□ 3.12
C9orf50-201ENST00000372478 TNNT2P45379 298 aaPredicted RBP34.5■■■■□ 3.11
C9orf50-201ENST00000372478 SPATA31A5Q5VU36 1347 aa34.5■■■■□ 3.11
C9orf50-201ENST00000372478 SPATA31A7Q8IWB4 1347 aa34.5■■■■□ 3.11
C9orf50-201ENST00000372478 MAP2P11137 1827 aaKnown RBP34.48■■■■□ 3.11
C9orf50-201ENST00000372478 RGS12O14924 1447 aa34.48■■■■□ 3.11
C9orf50-201ENST00000372478 AMPHP49418 695 aa34.48■■■■□ 3.11
C9orf50-201ENST00000372478 CDK12Q9NYV4 1490 aaPredicted RBP34.47■■■■□ 3.11
C9orf50-201ENST00000372478 USP35Q9P2H5 1018 aa34.47■■■■□ 3.11
C9orf50-201ENST00000372478 MORC1Q86VD1 984 aa34.46■■■■□ 3.11
C9orf50-201ENST00000372478 IP6K1Q92551 441 aa34.46■■■■□ 3.11
C9orf50-201ENST00000372478 PEAK1Q9H792 1746 aa34.46■■■■□ 3.11
C9orf50-201ENST00000372478 SPATA31A1Q5TZJ5 1347 aa34.46■■■■□ 3.11
C9orf50-201ENST00000372478 CNGB1Q14028 1251 aaPredicted RBP34.45■■■■□ 3.11
C9orf50-201ENST00000372478 CC2D1BQ5T0F9 858 aaKnown RBP34.44■■■■□ 3.1
C9orf50-201ENST00000372478 CSB-PGBD3P0DP91 1061 aa34.44■■■■□ 3.1
C9orf50-201ENST00000372478 HOXC9P31274 260 aa34.44■■■■□ 3.1
C9orf50-201ENST00000372478 EMILIN1Q9Y6C2 1016 aa34.44■■■■□ 3.1
C9orf50-201ENST00000372478 WDR17Q8IZU2 1322 aa34.44■■■■□ 3.1
C9orf50-201ENST00000372478 BLMP54132 1417 aaPredicted RBP34.43■■■■□ 3.1
C9orf50-201ENST00000372478 CRB1P82279 1406 aa34.43■■■■□ 3.1
C9orf50-201ENST00000372478 FAM98CQ17RN3 349 aaKnown RBP34.42■■■■□ 3.1
C9orf50-201ENST00000372478 TOM1L2Q6ZVM7 507 aa34.42■■■■□ 3.1
C9orf50-201ENST00000372478 RTL1A6NKG5 1358 aa34.41■■■■□ 3.1
C9orf50-201ENST00000372478 ERBB3P21860 1342 aa34.41■■■■□ 3.1
C9orf50-201ENST00000372478 ANKRD24Q8TF21 1146 aa34.41■■■■□ 3.1
C9orf50-201ENST00000372478 LTV1Q96GA3 475 aaPredicted RBP34.4■■■■□ 3.1
C9orf50-201ENST00000372478 PPM1GO15355 546 aaPredicted RBP34.39■■■■□ 3.1
C9orf50-201ENST00000372478 DDX10Q13206 875 aaKnown RBP34.37■■■■□ 3.09
C9orf50-201ENST00000372478 POLKQ9UBT6 870 aa34.37■■■■□ 3.09
C9orf50-201ENST00000372478 ZNF316A6NFI3 1004 aaPredicted RBP34.37■■■■□ 3.09
C9orf50-201ENST00000372478 FLT4P35916 1363 aa34.36■■■■□ 3.09
C9orf50-201ENST00000372478 NPC1L1Q9UHC9 1359 aa34.36■■■■□ 3.09
C9orf50-201ENST00000372478 A0A0G2JS52 829 aa34.36■■■■□ 3.09
C9orf50-201ENST00000372478 MYT1Q01538 1121 aa34.36■■■■□ 3.09
C9orf50-201ENST00000372478 HSP90AB2PQ58FF8 381 aa34.36■■■■□ 3.09
C9orf50-201ENST00000372478 BRWD3Q6RI45 1802 aa34.35■■■■□ 3.09
C9orf50-201ENST00000372478 ONECUT3O60422 494 aaPredicted RBP34.35■■■■□ 3.09
C9orf50-201ENST00000372478 SEPT12Q8IYM1 358 aa34.35■■■■□ 3.09
C9orf50-201ENST00000372478 TCP11L2Q8N4U5 519 aa34.35■■■■□ 3.09
C9orf50-201ENST00000372478 KIF24Q5T7B8 1368 aa34.34■■■■□ 3.09
C9orf50-201ENST00000372478 RGPD2P0DJD1 1756 aa34.33■■■■□ 3.09
C9orf50-201ENST00000372478 NLRP2Q9NX02 1062 aa34.33■■■■□ 3.09
C9orf50-201ENST00000372478 THSD7AQ9UPZ6 1657 aa34.32■■■■□ 3.09
C9orf50-201ENST00000372478 CARD10Q9BWT7 1032 aa34.32■■■■□ 3.08
C9orf50-201ENST00000372478 FAM208AQ9UK61 1670 aaKnown RBP34.31■■■■□ 3.08
C9orf50-201ENST00000372478 INSRP06213 1382 aa34.31■■■■□ 3.08
C9orf50-201ENST00000372478 BARGINQ6ZT62 677 aa34.3■■■■□ 3.08
C9orf50-201ENST00000372478 THRAP3Q9Y2W1 955 aaKnown RBP34.3■■■■□ 3.08
C9orf50-201ENST00000372478 WNK3Q9BYP7 1800 aa34.29■■■■□ 3.08
C9orf50-201ENST00000372478 SMG6Q86US8 1419 aaKnown RBP34.27■■■■□ 3.08
C9orf50-201ENST00000372478 PARP4Q9UKK3 1724 aaKnown RBP34.22■■■■□ 3.07
C9orf50-201ENST00000372478 NBPF6Q5VWK0 638 aa34.19■■■■□ 3.06
C9orf50-201ENST00000372478 NBPF4Q96M43 638 aa34.19■■■■□ 3.06
C9orf50-201ENST00000372478 MTHFSP49914 203 aa34.19■■■■□ 3.06
C9orf50-201ENST00000372478 KRT27Q7Z3Y8 459 aa34.19■■■■□ 3.06
C9orf50-201ENST00000372478 DISP2A7MBM2 1401 aa34.18■■■■□ 3.06
C9orf50-201ENST00000372478 USHBP1Q8N6Y0 703 aa34.18■■■■□ 3.06
C9orf50-201ENST00000372478 LRRC37A3O60309 1634 aa34.17■■■■□ 3.06
C9orf50-201ENST00000372478 SOCS7O14512 581 aa34.17■■■■□ 3.06
C9orf50-201ENST00000372478 EIF4A2Q14240 407 aaKnown RBP34.15■■■■□ 3.06
C9orf50-201ENST00000372478 CDCA7Q9BWT1 371 aaPredicted RBP34.14■■■■□ 3.06
C9orf50-201ENST00000372478 FAM182BQ5T319 152 aa34.13■■■■□ 3.05
C9orf50-201ENST00000372478 IL2RBP14784 551 aa34.12■■■■□ 3.05
C9orf50-201ENST00000372478 PDE3BQ13370 1112 aa34.11■■■■□ 3.05
C9orf50-201ENST00000372478 DDB1Q16531 1140 aa34.11■■■■□ 3.05
C9orf50-201ENST00000372478 EYA1Q99502 592 aa34.1■■■■□ 3.05
C9orf50-201ENST00000372478 PARD3Q8TEW0 1356 aa34.09■■■■□ 3.05
C9orf50-201ENST00000372478 EP400Q96L91 3159 aa34.09■■■■□ 3.05
C9orf50-201ENST00000372478 PPP2R1AP30153 589 aa34.08■■■■□ 3.05
C9orf50-201ENST00000372478 MEGF6O75095 1541 aa34.07■■■■□ 3.04
C9orf50-201ENST00000372478 EXOC5O00471 708 aa34.04■■■■□ 3.04
C9orf50-201ENST00000372478 TNS2Q63HR2 1409 aa34.04■■■■□ 3.04
C9orf50-201ENST00000372478 NCAPD2Q15021 1401 aa34.03■■■■□ 3.04
C9orf50-201ENST00000372478 IL13P35225 146 aa34.02■■■■□ 3.04
C9orf50-201ENST00000372478 COL3A1P02461 1466 aaPredicted RBP34.01■■■■□ 3.04
C9orf50-201ENST00000372478 RAPGEF4Q8WZA2 1011 aa34.01■■■■□ 3.04
C9orf50-201ENST00000372478 UPF1Q92900 1129 aaKnown RBP eCLIP34.01■■■■□ 3.04
C9orf50-201ENST00000372478 RGPD1P0DJD0 1748 aa34.01■■■■□ 3.03
C9orf50-201ENST00000372478 IGSF1Q8N6C5 1336 aa34.01■■■■□ 3.03
C9orf50-201ENST00000372478 OVOS2A0A0G2JMS6 1433 aa33.99■■■■□ 3.03
C9orf50-201ENST00000372478 MARCH10Q8NA82 808 aaPredicted RBP33.99■■■■□ 3.03
C9orf50-201ENST00000372478 DIAPH1O60610 1272 aaKnown RBP33.98■■■■□ 3.03
C9orf50-201ENST00000372478 TATP17735 454 aaPredicted RBP33.98■■■■□ 3.03
C9orf50-201ENST00000372478 RALBP1Q15311 655 aa33.97■■■■□ 3.03
C9orf50-201ENST00000372478 SHANK3Q9BYB0 1731 aa33.97■■■■□ 3.03
C9orf50-201ENST00000372478 FAM196AQ6ZSG2 479 aa33.95■■■■□ 3.03
C9orf50-201ENST00000372478 CFAP53Q96M91 514 aa33.95■■■■□ 3.03
C9orf50-201ENST00000372478 AEBP1Q8IUX7 1158 aa33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms