RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 MTHFSP49914 203 aa22.6■■□□□ 1.21
MMP9-201ENST00000372330 ZSCAN23Q3MJ62 389 aa22.6■■□□□ 1.21
MMP9-201ENST00000372330 TAF3Q5VWG9 929 aa22.6■■□□□ 1.21
MMP9-201ENST00000372330 PRIMPOLQ96LW4 560 aa22.59■■□□□ 1.21
MMP9-201ENST00000372330 SSFA2P28290 1259 aa22.59■■□□□ 1.21
MMP9-201ENST00000372330 HMGN5P82970 282 aaKnown RBP22.59■■□□□ 1.21
MMP9-201ENST00000372330 CFAP53Q96M91 514 aa22.59■■□□□ 1.21
MMP9-201ENST00000372330 CABP2Q9NPB3 220 aa22.59■■□□□ 1.21
MMP9-201ENST00000372330 REREQ9P2R6 1566 aa22.58■■□□□ 1.21
MMP9-201ENST00000372330 RBSNQ9H1K0 784 aa22.58■■□□□ 1.21
MMP9-201ENST00000372330 IQSEC2Q5JU85 1478 aa22.58■■□□□ 1.2
MMP9-201ENST00000372330 WDR63Q8IWG1 891 aa22.58■■□□□ 1.2
MMP9-201ENST00000372330 ARID3AQ99856 593 aa22.57■■□□□ 1.2
MMP9-201ENST00000372330 TCP11L2Q8N4U5 519 aa22.57■■□□□ 1.2
MMP9-201ENST00000372330 TMEM131LA2VDJ0 1609 aa22.56■■□□□ 1.2
MMP9-201ENST00000372330 AGLP35573 1532 aa22.56■■□□□ 1.2
MMP9-201ENST00000372330 NUCB2P80303 420 aa22.56■■□□□ 1.2
MMP9-201ENST00000372330 PHF23Q9BUL5 403 aaPredicted RBP22.56■■□□□ 1.2
MMP9-201ENST00000372330 STK26Q9P289 416 aa22.56■■□□□ 1.2
MMP9-201ENST00000372330 GTF2F1P35269 517 aaKnown RBP eCLIP22.56■■□□□ 1.2
MMP9-201ENST00000372330 GTF2E1P29083 439 aaPredicted RBP22.55■■□□□ 1.2
MMP9-201ENST00000372330 MLECQ14165 292 aa22.54■■□□□ 1.2
MMP9-201ENST00000372330 NEUROD2Q15784 382 aa22.54■■□□□ 1.2
MMP9-201ENST00000372330 ZKSCAN2Q63HK3 967 aa22.54■■□□□ 1.2
MMP9-201ENST00000372330 CAVIN1Q6NZI2 390 aaKnown RBP22.54■■□□□ 1.2
MMP9-201ENST00000372330 KIF2CQ99661 725 aa22.54■■□□□ 1.2
MMP9-201ENST00000372330 CLTCQ00610 1675 aaKnown RBP22.54■■□□□ 1.2
MMP9-201ENST00000372330 KIAA2012Q0VF49 1180 aa22.53■■□□□ 1.2
MMP9-201ENST00000372330 RRP7AQ9Y3A4 280 aaKnown RBP22.53■■□□□ 1.2
MMP9-201ENST00000372330 DZIP1LQ8IYY4 767 aaKnown RBP22.53■■□□□ 1.2
MMP9-201ENST00000372330 TNNQ9UQP3 1299 aa22.53■■□□□ 1.2
MMP9-201ENST00000372330 PRIM1P49642 420 aaKnown RBP22.52■■□□□ 1.2
MMP9-201ENST00000372330 FTSJ3Q8IY81 847 aaKnown RBP22.52■■□□□ 1.2
MMP9-201ENST00000372330 KIF16BQ96L93 1317 aa22.52■■□□□ 1.2
MMP9-201ENST00000372330 CCDC27Q2M243 656 aa22.52■■□□□ 1.2
MMP9-201ENST00000372330 LMBRD1Q9NUN5 540 aa22.52■■□□□ 1.2
MMP9-201ENST00000372330 A0A1W2PP64 1363 aa22.52■■□□□ 1.2
MMP9-201ENST00000372330 ABCC11Q96J66 1382 aa22.52■■□□□ 1.2
MMP9-201ENST00000372330 PTPRMP28827 1452 aa22.52■■□□□ 1.2
MMP9-201ENST00000372330 SRPK2P78362 688 aaKnown RBP22.51■■□□□ 1.19
MMP9-201ENST00000372330 CT47B1P0C2W7 299 aaPredicted RBP22.51■■□□□ 1.19
MMP9-201ENST00000372330 NCBP3Q53F19 620 aaKnown RBP22.5■■□□□ 1.19
MMP9-201ENST00000372330 DDX19BQ9UMR2 479 aa22.5■■□□□ 1.19
MMP9-201ENST00000372330 PPP6R1Q9UPN7 881 aa22.5■■□□□ 1.19
MMP9-201ENST00000372330 BMP2KLQ5H9B9 411 aa22.49■■□□□ 1.19
MMP9-201ENST00000372330 LRSAM1Q6UWE0 723 aa22.49■■□□□ 1.19
MMP9-201ENST00000372330 ATAD2Q6PL18 1390 aa22.49■■□□□ 1.19
MMP9-201ENST00000372330 MCTP1Q6DN14 999 aa22.49■■□□□ 1.19
MMP9-201ENST00000372330 YTHDC2Q9H6S0 1430 aaKnown RBP22.49■■□□□ 1.19
MMP9-201ENST00000372330 ARHGEF40Q8TER5 1519 aa22.48■■□□□ 1.19
MMP9-201ENST00000372330 GAS2L2Q8NHY3 880 aa22.48■■□□□ 1.19
MMP9-201ENST00000372330 FOXD4L1Q9NU39 408 aa22.48■■□□□ 1.19
MMP9-201ENST00000372330 PRAM1Q96QH2 718 aa22.47■■□□□ 1.19
MMP9-201ENST00000372330 CD2BP2O95400 341 aaKnown RBP22.47■■□□□ 1.19
MMP9-201ENST00000372330 U2AF1L5P0DN76 240 aaPredicted RBP22.47■■□□□ 1.19
MMP9-201ENST00000372330 CBX1P83916 185 aa22.47■■□□□ 1.19
MMP9-201ENST00000372330 U2AF1Q01081 240 aaKnown RBP eCLIP22.47■■□□□ 1.19
MMP9-201ENST00000372330 NUCB1Q02818 461 aa22.46■■□□□ 1.19
MMP9-201ENST00000372330 MINK1Q8N4C8 1332 aaPredicted RBP22.45■■□□□ 1.18
MMP9-201ENST00000372330 CYP2E1P05181 493 aaPredicted RBP22.45■■□□□ 1.18
MMP9-201ENST00000372330 DNTTIP2Q5QJE6 756 aaKnown RBP22.45■■□□□ 1.18
MMP9-201ENST00000372330 ZNF710Q8N1W2 664 aa22.45■■□□□ 1.18
MMP9-201ENST00000372330 BCL2L13Q9BXK5 485 aa22.45■■□□□ 1.18
MMP9-201ENST00000372330 TERF2IPQ9NYB0 399 aa22.45■■□□□ 1.18
MMP9-201ENST00000372330 STAG3Q9UJ98 1225 aa22.45■■□□□ 1.18
MMP9-201ENST00000372330 CWC22Q9HCG8 908 aaKnown RBP22.44■■□□□ 1.18
MMP9-201ENST00000372330 NAP1L2Q9ULW6 460 aaPredicted RBP22.44■■□□□ 1.18
MMP9-201ENST00000372330 GGNBP2Q9H3C7 697 aa22.43■■□□□ 1.18
MMP9-201ENST00000372330 KIF3AQ9Y496 699 aa22.43■■□□□ 1.18
MMP9-201ENST00000372330 ADGRB2O60241 1585 aa22.43■■□□□ 1.18
MMP9-201ENST00000372330 ALKQ9UM73 1620 aa22.43■■□□□ 1.18
MMP9-201ENST00000372330 CD163L1Q9NR16 1453 aa22.42■■□□□ 1.18
MMP9-201ENST00000372330 PDIA4P13667 645 aaKnown RBP22.42■■□□□ 1.18
MMP9-201ENST00000372330 TMEM51Q9NW97 253 aa22.42■■□□□ 1.18
MMP9-201ENST00000372330 MED14O60244 1454 aa22.42■■□□□ 1.18
MMP9-201ENST00000372330 FYB1O15117 783 aa22.41■■□□□ 1.18
MMP9-201ENST00000372330 PTMAP06454 111 aaKnown RBP22.41■■□□□ 1.18
MMP9-201ENST00000372330 SPATA31D1Q6ZQQ2 1576 aa22.41■■□□□ 1.18
MMP9-201ENST00000372330 PIBF1Q8WXW3 757 aa22.41■■□□□ 1.18
MMP9-201ENST00000372330 IPO4Q8TEX9 1081 aaKnown RBP22.4■■□□□ 1.18
MMP9-201ENST00000372330 CHD1LQ86WJ1 897 aa22.4■■□□□ 1.18
MMP9-201ENST00000372330 RABEP1Q15276 862 aa22.39■■□□□ 1.17
MMP9-201ENST00000372330 ATP2B3Q16720 1220 aa22.39■■□□□ 1.17
MMP9-201ENST00000372330 CFAP44Q96MT7 982 aa22.39■■□□□ 1.17
MMP9-201ENST00000372330 BCL11BQ9C0K0 894 aaPredicted RBP22.39■■□□□ 1.17
MMP9-201ENST00000372330 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.39■■□□□ 1.17
MMP9-201ENST00000372330 COL3A1P02461 1466 aaPredicted RBP22.38■■□□□ 1.17
MMP9-201ENST00000372330 GPT2Q8TD30 523 aa22.38■■□□□ 1.17
MMP9-201ENST00000372330 PRPF40AO75400 957 aaKnown RBP22.37■■□□□ 1.17
MMP9-201ENST00000372330 MBD3O95983 291 aa22.37■■□□□ 1.17
MMP9-201ENST00000372330 ANKRD26Q9UPS8 1709 aa22.37■■□□□ 1.17
MMP9-201ENST00000372330 NOLC1Q14978 699 aaKnown RBP eCLIP22.37■■□□□ 1.17
MMP9-201ENST00000372330 HDGFL2Q7Z4V5 671 aaPredicted RBP22.37■■□□□ 1.17
MMP9-201ENST00000372330 PLEKHF1Q96S99 279 aa22.37■■□□□ 1.17
MMP9-201ENST00000372330 CDK19Q9BWU1 502 aa22.37■■□□□ 1.17
MMP9-201ENST00000372330 A2ML1A8K2U0 1454 aa22.36■■□□□ 1.17
MMP9-201ENST00000372330 U2SURPO15042 1029 aaKnown RBP22.36■■□□□ 1.17
MMP9-201ENST00000372330 ESF1Q9H501 851 aaKnown RBP22.36■■□□□ 1.17
MMP9-201ENST00000372330 ITPRIPQ8IWB1 547 aa22.36■■□□□ 1.17
MMP9-201ENST00000372330 PDCL2Q8N4E4 241 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms