RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 ARHGEF25Q86VW2 580 aa15.42■□□□□ 0.06
CALCOCO2-202ENST00000372317 HSP90AB2PQ58FF8 381 aa15.41■□□□□ 0.06
CALCOCO2-202ENST00000372317 BLMP54132 1417 aaPredicted RBP15.41■□□□□ 0.06
CALCOCO2-202ENST00000372317 JCADQ9P266 1359 aa15.4■□□□□ 0.06
CALCOCO2-202ENST00000372317 DIAPH1O60610 1272 aaKnown RBP15.4■□□□□ 0.06
CALCOCO2-202ENST00000372317 HSPA1LP34931 641 aa15.4■□□□□ 0.06
CALCOCO2-202ENST00000372317 LMO7Q8WWI1 1683 aa15.4■□□□□ 0.06
CALCOCO2-202ENST00000372317 RGPD1P0DJD0 1748 aa15.4■□□□□ 0.06
CALCOCO2-202ENST00000372317 COL18A1P39060 1754 aa15.39■□□□□ 0.05
CALCOCO2-202ENST00000372317 EIF4A2Q14240 407 aaKnown RBP15.39■□□□□ 0.05
CALCOCO2-202ENST00000372317 IL13P35225 146 aa15.38■□□□□ 0.05
CALCOCO2-202ENST00000372317 IP6K1Q92551 441 aa15.38■□□□□ 0.05
CALCOCO2-202ENST00000372317 YTHDC1Q96MU7 727 aaKnown RBP15.38■□□□□ 0.05
CALCOCO2-202ENST00000372317 PRDM11Q9NQV5 511 aa15.38■□□□□ 0.05
CALCOCO2-202ENST00000372317 U2SURPO15042 1029 aaKnown RBP15.37■□□□□ 0.05
CALCOCO2-202ENST00000372317 CHRNA2Q15822 529 aa15.37■□□□□ 0.05
CALCOCO2-202ENST00000372317 ADAMTS8Q9UP79 889 aa15.37■□□□□ 0.05
CALCOCO2-202ENST00000372317 NUDCQ9Y266 331 aa15.37■□□□□ 0.05
CALCOCO2-202ENST00000372317 MSH5O43196 834 aa15.36■□□□□ 0.05
CALCOCO2-202ENST00000372317 U2AF1L5P0DN76 240 aaPredicted RBP15.36■□□□□ 0.05
CALCOCO2-202ENST00000372317 U2AF1Q01081 240 aaKnown RBP eCLIP15.36■□□□□ 0.05
CALCOCO2-202ENST00000372317 LTV1Q96GA3 475 aaPredicted RBP15.36■□□□□ 0.05
CALCOCO2-202ENST00000372317 COL14A1Q05707 1796 aaKnown RBP15.36■□□□□ 0.05
CALCOCO2-202ENST00000372317 LRP6O75581 1613 aa15.35■□□□□ 0.05
CALCOCO2-202ENST00000372317 CAMTA1Q9Y6Y1 1673 aa15.35■□□□□ 0.05
CALCOCO2-202ENST00000372317 RGPD5Q99666 1765 aa15.34■□□□□ 0.05
CALCOCO2-202ENST00000372317 NUTM2BA6NNL0 878 aaPredicted RBP15.34■□□□□ 0.05
CALCOCO2-202ENST00000372317 NUTM2EB1AL46 878 aaPredicted RBP15.34■□□□□ 0.05
CALCOCO2-202ENST00000372317 NUTM2AQ8IVF1 878 aaPredicted RBP15.34■□□□□ 0.05
CALCOCO2-202ENST00000372317 AXIN2Q9Y2T1 843 aa15.34■□□□□ 0.05
CALCOCO2-202ENST00000372317 ERBB3P21860 1342 aa15.34■□□□□ 0.05
CALCOCO2-202ENST00000372317 PLCH1Q4KWH8 1693 aa15.34■□□□□ 0.05
CALCOCO2-202ENST00000372317 FAM208AQ9UK61 1670 aaKnown RBP15.34■□□□□ 0.05
CALCOCO2-202ENST00000372317 COL5A2P05997 1499 aaPredicted RBP15.33■□□□□ 0.05
CALCOCO2-202ENST00000372317 CCDC146Q8IYE0 955 aa15.33■□□□□ 0.04
CALCOCO2-202ENST00000372317 ANKRD24Q8TF21 1146 aa15.33■□□□□ 0.04
CALCOCO2-202ENST00000372317 IGSF1Q8N6C5 1336 aa15.33■□□□□ 0.04
CALCOCO2-202ENST00000372317 ADAMTS2O95450 1211 aa15.32■□□□□ 0.04
CALCOCO2-202ENST00000372317 HMOX1P09601 288 aa15.31■□□□□ 0.04
CALCOCO2-202ENST00000372317 AEBP1Q8IUX7 1158 aa15.31■□□□□ 0.04
CALCOCO2-202ENST00000372317 SPATA31A6Q5VVP1 1343 aa15.31■□□□□ 0.04
CALCOCO2-202ENST00000372317 NCAPD2Q15021 1401 aa15.31■□□□□ 0.04
CALCOCO2-202ENST00000372317 FAM83GA6ND36 823 aa15.3■□□□□ 0.04
CALCOCO2-202ENST00000372317 RGPD2P0DJD1 1756 aa15.3■□□□□ 0.04
CALCOCO2-202ENST00000372317 KDRP35968 1356 aa15.3■□□□□ 0.04
CALCOCO2-202ENST00000372317 HNRNPUQ00839 825 aaKnown RBP eCLIP15.3■□□□□ 0.04
CALCOCO2-202ENST00000372317 NRAPQ86VF7 1730 aa15.3■□□□□ 0.04
CALCOCO2-202ENST00000372317 EYA1Q99502 592 aa15.3■□□□□ 0.04
CALCOCO2-202ENST00000372317 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
CALCOCO2-202ENST00000372317 SENP3-EIF4A1A0A087X0R7 540 aa15.29■□□□□ 0.04
CALCOCO2-202ENST00000372317 USHBP1Q8N6Y0 703 aa15.29■□□□□ 0.04
CALCOCO2-202ENST00000372317 CSB-PGBD3P0DP91 1061 aa15.28■□□□□ 0.04
CALCOCO2-202ENST00000372317 PRKAR2BP31323 418 aa15.28■□□□□ 0.04
CALCOCO2-202ENST00000372317 SULT6B1Q6IMI4 303 aa15.28■□□□□ 0.04
CALCOCO2-202ENST00000372317 WDR17Q8IZU2 1322 aa15.27■□□□□ 0.04
CALCOCO2-202ENST00000372317 MAPK8IP3Q9UPT6 1336 aa15.27■□□□□ 0.04
CALCOCO2-202ENST00000372317 NWD2Q9ULI1 1742 aa15.27■□□□□ 0.04
CALCOCO2-202ENST00000372317 NBPF6Q5VWK0 638 aa15.27■□□□□ 0.04
CALCOCO2-202ENST00000372317 FBXO41Q8TF61 875 aa15.27■□□□□ 0.04
CALCOCO2-202ENST00000372317 RUNDC1Q96C34 613 aa15.27■□□□□ 0.04
CALCOCO2-202ENST00000372317 NBPF4Q96M43 638 aa15.27■□□□□ 0.04
CALCOCO2-202ENST00000372317 SLIT2O94813 1529 aa15.27■□□□□ 0.03
CALCOCO2-202ENST00000372317 FCHSD2O94868 740 aa15.26■□□□□ 0.03
CALCOCO2-202ENST00000372317 PLEKHF1Q96S99 279 aa15.26■□□□□ 0.03
CALCOCO2-202ENST00000372317 BTG4Q9NY30 223 aa15.26■□□□□ 0.03
CALCOCO2-202ENST00000372317 STRN4Q9NRL3 753 aa15.25■□□□□ 0.03
CALCOCO2-202ENST00000372317 NLRP2Q9NX02 1062 aa15.25■□□□□ 0.03
CALCOCO2-202ENST00000372317 APAF1O14727 1248 aa15.24■□□□□ 0.03
CALCOCO2-202ENST00000372317 CRB1P82279 1406 aa15.24■□□□□ 0.03
CALCOCO2-202ENST00000372317 MEGF6O75095 1541 aa15.23■□□□□ 0.03
CALCOCO2-202ENST00000372317 LARP1Q6PKG0 1096 aaKnown RBP15.23■□□□□ 0.03
CALCOCO2-202ENST00000372317 C8orf37Q96NL8 207 aa15.23■□□□□ 0.03
CALCOCO2-202ENST00000372317 PNNQ9H307 717 aaKnown RBP15.23■□□□□ 0.03
CALCOCO2-202ENST00000372317 ZBED9Q6R2W3 1325 aa15.22■□□□□ 0.03
CALCOCO2-202ENST00000372317 EVA1CP58658 441 aa15.22■□□□□ 0.03
CALCOCO2-202ENST00000372317 MEX3CQ5U5Q3 659 aaKnown RBP15.22■□□□□ 0.03
CALCOCO2-202ENST00000372317 TOM1L2Q6ZVM7 507 aa15.22■□□□□ 0.03
CALCOCO2-202ENST00000372317 TCP11L2Q8N4U5 519 aa15.22■□□□□ 0.03
CALCOCO2-202ENST00000372317 PHACTR3Q96KR7 559 aa15.22■□□□□ 0.03
CALCOCO2-202ENST00000372317 RRP7AQ9Y3A4 280 aaKnown RBP15.22■□□□□ 0.03
CALCOCO2-202ENST00000372317 NEFMP07197 916 aa15.21■□□□□ 0.03
CALCOCO2-202ENST00000372317 SALL2Q9Y467 1007 aaPredicted RBP15.21■□□□□ 0.03
CALCOCO2-202ENST00000372317 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.2■□□□□ 0.02
CALCOCO2-202ENST00000372317 PARP4Q9UKK3 1724 aaKnown RBP15.2■□□□□ 0.02
CALCOCO2-202ENST00000372317 BCL9LQ86UU0 1499 aa15.2■□□□□ 0.02
CALCOCO2-202ENST00000372317 WNK3Q9BYP7 1800 aa15.2■□□□□ 0.02
CALCOCO2-202ENST00000372317 NGLY1Q96IV0 654 aa15.19■□□□□ 0.02
CALCOCO2-202ENST00000372317 CARD10Q9BWT7 1032 aa15.19■□□□□ 0.02
CALCOCO2-202ENST00000372317 OVOS2A0A0G2JMS6 1433 aa15.18■□□□□ 0.02
CALCOCO2-202ENST00000372317 PKD1L3Q7Z443 1732 aa15.18■□□□□ 0.02
CALCOCO2-202ENST00000372317 TMPOP42166 694 aaKnown RBP15.18■□□□□ 0.02
CALCOCO2-202ENST00000372317 NEUROD2Q15784 382 aa15.18■□□□□ 0.02
CALCOCO2-202ENST00000372317 NFE2L2Q16236 605 aa15.18■□□□□ 0.02
CALCOCO2-202ENST00000372317 PLEKHG2Q9H7P9 1386 aa15.17■□□□□ 0.02
CALCOCO2-202ENST00000372317 RAPGEF4Q8WZA2 1011 aa15.17■□□□□ 0.02
CALCOCO2-202ENST00000372317 DISP2A7MBM2 1401 aa15.17■□□□□ 0.02
CALCOCO2-202ENST00000372317 MTHFSDQ2M296 383 aaKnown RBP15.16■□□□□ 0.02
CALCOCO2-202ENST00000372317 UNC5CLQ8IV45 518 aa15.16■□□□□ 0.02
CALCOCO2-202ENST00000372317 FNBP4Q8N3X1 1017 aaPredicted RBP15.16■□□□□ 0.02
CALCOCO2-202ENST00000372317 USP35Q9P2H5 1018 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms