RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 KRT27Q7Z3Y8 459 aa27.82■■■□□ 2.04
TMEM53-205ENST00000372244 TCP11L2Q8N4U5 519 aa27.81■■■□□ 2.04
TMEM53-205ENST00000372244 COG3Q96JB2 828 aa27.81■■■□□ 2.04
TMEM53-205ENST00000372244 USP35Q9P2H5 1018 aa27.81■■■□□ 2.04
TMEM53-205ENST00000372244 THRAP3Q9Y2W1 955 aaKnown RBP27.8■■■□□ 2.04
TMEM53-205ENST00000372244 C11orf95C9JLR9 678 aaPredicted RBP27.79■■■□□ 2.04
TMEM53-205ENST00000372244 A0A0G2JS52 829 aa27.77■■■□□ 2.04
TMEM53-205ENST00000372244 CRB1P82279 1406 aa27.77■■■□□ 2.04
TMEM53-205ENST00000372244 MYT1Q01538 1121 aa27.77■■■□□ 2.04
TMEM53-205ENST00000372244 WDR17Q8IZU2 1322 aa27.77■■■□□ 2.04
TMEM53-205ENST00000372244 CCDC125Q86Z20 511 aa27.76■■■□□ 2.03
TMEM53-205ENST00000372244 GGNBP2Q9H3C7 697 aa27.76■■■□□ 2.03
TMEM53-205ENST00000372244 BRWD3Q6RI45 1802 aa27.76■■■□□ 2.03
TMEM53-205ENST00000372244 MYOM1P52179 1685 aa27.75■■■□□ 2.03
TMEM53-205ENST00000372244 ABCC6O95255 1503 aa27.74■■■□□ 2.03
TMEM53-205ENST00000372244 TOM1L2Q6ZVM7 507 aa27.74■■■□□ 2.03
TMEM53-205ENST00000372244 POLR3GLQ9BT43 218 aa27.74■■■□□ 2.03
TMEM53-205ENST00000372244 THSD7AQ9UPZ6 1657 aa27.73■■■□□ 2.03
TMEM53-205ENST00000372244 FBLN1P23142 703 aa27.72■■■□□ 2.03
TMEM53-205ENST00000372244 IP6K1Q92551 441 aa27.71■■■□□ 2.03
TMEM53-205ENST00000372244 CARD10Q9BWT7 1032 aa27.71■■■□□ 2.03
TMEM53-205ENST00000372244 NSD3Q9BZ95 1437 aa27.7■■■□□ 2.03
TMEM53-205ENST00000372244 CSB-PGBD3P0DP91 1061 aa27.69■■■□□ 2.02
TMEM53-205ENST00000372244 ERBB3P21860 1342 aa27.68■■■□□ 2.02
TMEM53-205ENST00000372244 MAP3K19Q56UN5 1328 aa27.68■■■□□ 2.02
TMEM53-205ENST00000372244 PANK3Q9H999 370 aa27.68■■■□□ 2.02
TMEM53-205ENST00000372244 RGPD5Q99666 1765 aa27.67■■■□□ 2.02
TMEM53-205ENST00000372244 FAM182BQ5T319 152 aa27.66■■■□□ 2.02
TMEM53-205ENST00000372244 CGNL1Q0VF96 1302 aa27.66■■■□□ 2.02
TMEM53-205ENST00000372244 ANKRD24Q8TF21 1146 aa27.65■■■□□ 2.02
TMEM53-205ENST00000372244 BLMP54132 1417 aaPredicted RBP27.64■■■□□ 2.02
TMEM53-205ENST00000372244 PDE3BQ13370 1112 aa27.64■■■□□ 2.01
TMEM53-205ENST00000372244 CDCA7Q9BWT1 371 aaPredicted RBP27.64■■■□□ 2.01
TMEM53-205ENST00000372244 KIF7Q2M1P5 1343 aa27.63■■■□□ 2.01
TMEM53-205ENST00000372244 HOXC9P31274 260 aa27.63■■■□□ 2.01
TMEM53-205ENST00000372244 RRS1Q15050 365 aaKnown RBP27.63■■■□□ 2.01
TMEM53-205ENST00000372244 LTN1O94822 1766 aa27.62■■■□□ 2.01
TMEM53-205ENST00000372244 AMPHP49418 695 aa27.62■■■□□ 2.01
TMEM53-205ENST00000372244 FAM196AQ6ZSG2 479 aa27.62■■■□□ 2.01
TMEM53-205ENST00000372244 CCDC7Q96M83 1385 aa27.61■■■□□ 2.01
TMEM53-205ENST00000372244 NLRP2Q9NX02 1062 aa27.61■■■□□ 2.01
TMEM53-205ENST00000372244 DDB1Q16531 1140 aa27.57■■■□□ 2
TMEM53-205ENST00000372244 DISP2A7MBM2 1401 aa27.57■■■□□ 2
TMEM53-205ENST00000372244 RTL1A6NKG5 1358 aa27.57■■■□□ 2
TMEM53-205ENST00000372244 KIF20BQ96Q89 1820 aa27.56■■■□□ 2
TMEM53-205ENST00000372244 PARP4Q9UKK3 1724 aaKnown RBP27.55■■■□□ 2
TMEM53-205ENST00000372244 KIF24Q5T7B8 1368 aa27.55■■■□□ 2
TMEM53-205ENST00000372244 SF3B2Q13435 895 aaKnown RBP27.55■■■□□ 2
TMEM53-205ENST00000372244 LTV1Q96GA3 475 aaPredicted RBP27.55■■■□□ 2
TMEM53-205ENST00000372244 EXOC5O00471 708 aa27.52■■■□□ 2
TMEM53-205ENST00000372244 HSP90AB2PQ58FF8 381 aa27.52■■■□□ 2
TMEM53-205ENST00000372244 DEFB132Q7Z7B7 95 aa27.52■■■□□ 2
TMEM53-205ENST00000372244 MARCH10Q8NA82 808 aaPredicted RBP27.51■■■□□ 2
TMEM53-205ENST00000372244 EMILIN1Q9Y6C2 1016 aa27.51■■■□□ 2
TMEM53-205ENST00000372244 INSRP06213 1382 aa27.51■■□□□ 1.99
TMEM53-205ENST00000372244 IL2RBP14784 551 aa27.51■■□□□ 1.99
TMEM53-205ENST00000372244 KNSTRNQ9Y448 316 aa27.51■■□□□ 1.99
TMEM53-205ENST00000372244 WASHC2AQ641Q2 1341 aa27.5■■□□□ 1.99
TMEM53-205ENST00000372244 TRIM37O94972 964 aa27.5■■□□□ 1.99
TMEM53-205ENST00000372244 FLT4P35916 1363 aa27.49■■□□□ 1.99
TMEM53-205ENST00000372244 PER1O15534 1290 aaPredicted RBP27.49■■□□□ 1.99
TMEM53-205ENST00000372244 POLKQ9UBT6 870 aa27.49■■□□□ 1.99
TMEM53-205ENST00000372244 NSD2O96028 1365 aa27.48■■□□□ 1.99
TMEM53-205ENST00000372244 NBPF6Q5VWK0 638 aa27.47■■□□□ 1.99
TMEM53-205ENST00000372244 NBPF4Q96M43 638 aa27.47■■□□□ 1.99
TMEM53-205ENST00000372244 BAG6P46379 1132 aa27.46■■□□□ 1.99
TMEM53-205ENST00000372244 AMER1Q5JTC6 1135 aaPredicted RBP27.46■■□□□ 1.99
TMEM53-205ENST00000372244 LRRC37A3O60309 1634 aa27.46■■□□□ 1.99
TMEM53-205ENST00000372244 BCL9O00512 1426 aa27.46■■□□□ 1.99
TMEM53-205ENST00000372244 OVOS2A0A0G2JMS6 1433 aa27.45■■□□□ 1.98
TMEM53-205ENST00000372244 PEAK1Q9H792 1746 aa27.44■■□□□ 1.98
TMEM53-205ENST00000372244 TNNT2P45379 298 aaPredicted RBP27.44■■□□□ 1.98
TMEM53-205ENST00000372244 WNK3Q9BYP7 1800 aa27.44■■□□□ 1.98
TMEM53-205ENST00000372244 PPM1GO15355 546 aaPredicted RBP27.43■■□□□ 1.98
TMEM53-205ENST00000372244 EN1Q05925 392 aaPredicted RBP27.42■■□□□ 1.98
TMEM53-205ENST00000372244 MORC1Q86VD1 984 aa27.41■■□□□ 1.98
TMEM53-205ENST00000372244 TNS2Q63HR2 1409 aa27.41■■□□□ 1.98
TMEM53-205ENST00000372244 FAM208AQ9UK61 1670 aaKnown RBP27.4■■□□□ 1.98
TMEM53-205ENST00000372244 SMG6Q86US8 1419 aaKnown RBP27.4■■□□□ 1.98
TMEM53-205ENST00000372244 APBA3O96018 575 aa27.4■■□□□ 1.98
TMEM53-205ENST00000372244 CAMKK2Q96RR4 588 aa27.39■■□□□ 1.98
TMEM53-205ENST00000372244 RGPD1P0DJD0 1748 aa27.39■■□□□ 1.98
TMEM53-205ENST00000372244 BCL11BQ9C0K0 894 aaPredicted RBP27.38■■□□□ 1.97
TMEM53-205ENST00000372244 MAP2P11137 1827 aaKnown RBP27.37■■□□□ 1.97
TMEM53-205ENST00000372244 ANKRD26Q9UPS8 1709 aa27.37■■□□□ 1.97
TMEM53-205ENST00000372244 USHBP1Q8N6Y0 703 aa27.37■■□□□ 1.97
TMEM53-205ENST00000372244 TNS1Q9HBL0 1735 aaKnown RBP27.35■■□□□ 1.97
TMEM53-205ENST00000372244 PTF1AQ7RTS3 328 aa27.35■■□□□ 1.97
TMEM53-205ENST00000372244 EZH2Q15910 746 aaKnown RBP27.34■■□□□ 1.97
TMEM53-205ENST00000372244 RGPD2P0DJD1 1756 aa27.34■■□□□ 1.97
TMEM53-205ENST00000372244 ZCRB1Q8TBF4 217 aaKnown RBP27.33■■□□□ 1.97
TMEM53-205ENST00000372244 EYA1Q99502 592 aa27.32■■□□□ 1.96
TMEM53-205ENST00000372244 NPC1L1Q9UHC9 1359 aa27.32■■□□□ 1.96
TMEM53-205ENST00000372244 PLSCR1O15162 318 aa27.32■■□□□ 1.96
TMEM53-205ENST00000372244 EIF4A2Q14240 407 aaKnown RBP27.32■■□□□ 1.96
TMEM53-205ENST00000372244 RAPGEF4Q8WZA2 1011 aa27.32■■□□□ 1.96
TMEM53-205ENST00000372244 MEGF6O75095 1541 aa27.31■■□□□ 1.96
TMEM53-205ENST00000372244 PARD3Q8TEW0 1356 aa27.31■■□□□ 1.96
TMEM53-205ENST00000372244 DDX54Q8TDD1 881 aaKnown RBP27.31■■□□□ 1.96
TMEM53-205ENST00000372244 NCAPD2Q15021 1401 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms