RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 BCL9LQ86UU0 1499 aa22.16■■□□□ 1.14
TMEM53-203ENST00000372242 USP21Q9UK80 565 aa22.15■■□□□ 1.14
TMEM53-203ENST00000372242 HOXC9P31274 260 aa22.15■■□□□ 1.14
TMEM53-203ENST00000372242 IP6K1Q92551 441 aa22.15■■□□□ 1.14
TMEM53-203ENST00000372242 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
TMEM53-203ENST00000372242 PARD3Q8TEW0 1356 aa22.14■■□□□ 1.14
TMEM53-203ENST00000372242 STRN4Q9NRL3 753 aa22.14■■□□□ 1.13
TMEM53-203ENST00000372242 NWD2Q9ULI1 1742 aa22.13■■□□□ 1.13
TMEM53-203ENST00000372242 HSP90AB2PQ58FF8 381 aa22.13■■□□□ 1.13
TMEM53-203ENST00000372242 UNC5CLQ8IV45 518 aa22.13■■□□□ 1.13
TMEM53-203ENST00000372242 RGS17Q9UGC6 210 aaPredicted RBP22.13■■□□□ 1.13
TMEM53-203ENST00000372242 MTHFSP49914 203 aa22.12■■□□□ 1.13
TMEM53-203ENST00000372242 FLT4P35916 1363 aa22.12■■□□□ 1.13
TMEM53-203ENST00000372242 PPP2R1AP30153 589 aa22.11■■□□□ 1.13
TMEM53-203ENST00000372242 EVA1CP58658 441 aa22.11■■□□□ 1.13
TMEM53-203ENST00000372242 NRAPQ86VF7 1730 aa22.11■■□□□ 1.13
TMEM53-203ENST00000372242 RTL1A6NKG5 1358 aa22.11■■□□□ 1.13
TMEM53-203ENST00000372242 COL5A2P05997 1499 aaPredicted RBP22.11■■□□□ 1.13
TMEM53-203ENST00000372242 LTV1Q96GA3 475 aaPredicted RBP22.1■■□□□ 1.13
TMEM53-203ENST00000372242 ABCC6O95255 1503 aa22.1■■□□□ 1.13
TMEM53-203ENST00000372242 RALBP1Q15311 655 aa22.1■■□□□ 1.13
TMEM53-203ENST00000372242 PRKRIP1Q9H875 184 aaPredicted RBP22.1■■□□□ 1.13
TMEM53-203ENST00000372242 BLMP54132 1417 aaPredicted RBP22.09■■□□□ 1.13
TMEM53-203ENST00000372242 KIF24Q5T7B8 1368 aa22.09■■□□□ 1.13
TMEM53-203ENST00000372242 SMG6Q86US8 1419 aaKnown RBP22.09■■□□□ 1.13
TMEM53-203ENST00000372242 LARP1Q6PKG0 1096 aaKnown RBP22.08■■□□□ 1.13
TMEM53-203ENST00000372242 ZNF772Q68DY9 489 aaPredicted RBP22.08■■□□□ 1.12
TMEM53-203ENST00000372242 ANKRD24Q8TF21 1146 aa22.08■■□□□ 1.12
TMEM53-203ENST00000372242 ERBB3P21860 1342 aa22.07■■□□□ 1.12
TMEM53-203ENST00000372242 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.07■■□□□ 1.12
TMEM53-203ENST00000372242 CSB-PGBD3P0DP91 1061 aa22.07■■□□□ 1.12
TMEM53-203ENST00000372242 QTRT2Q9H974 415 aaKnown RBP22.07■■□□□ 1.12
TMEM53-203ENST00000372242 INSRP06213 1382 aa22.06■■□□□ 1.12
TMEM53-203ENST00000372242 CCDC9Q9Y3X0 531 aaKnown RBP22.06■■□□□ 1.12
TMEM53-203ENST00000372242 CDK12Q9NYV4 1490 aaPredicted RBP22.05■■□□□ 1.12
TMEM53-203ENST00000372242 WDR17Q8IZU2 1322 aa22.05■■□□□ 1.12
TMEM53-203ENST00000372242 USP35Q9P2H5 1018 aa22.05■■□□□ 1.12
TMEM53-203ENST00000372242 ANP32CO43423 234 aa22.04■■□□□ 1.12
TMEM53-203ENST00000372242 POTEAQ6S8J7 498 aa22.04■■□□□ 1.12
TMEM53-203ENST00000372242 TRPC5Q9UL62 973 aaPredicted RBP22.04■■□□□ 1.12
TMEM53-203ENST00000372242 VPS72Q15906 364 aa22.03■■□□□ 1.12
TMEM53-203ENST00000372242 TOM1L2Q6ZVM7 507 aa22.03■■□□□ 1.12
TMEM53-203ENST00000372242 ATRNO75882 1429 aa22.03■■□□□ 1.12
TMEM53-203ENST00000372242 MYBBP1AQ9BQG0 1328 aaKnown RBP22.02■■□□□ 1.12
TMEM53-203ENST00000372242 NLRP2Q9NX02 1062 aa22.02■■□□□ 1.12
TMEM53-203ENST00000372242 EIF4A2Q14240 407 aaKnown RBP22.01■■□□□ 1.11
TMEM53-203ENST00000372242 DIEXFQ68CQ4 756 aaKnown RBP22.01■■□□□ 1.11
TMEM53-203ENST00000372242 CRB1P82279 1406 aa22.01■■□□□ 1.11
TMEM53-203ENST00000372242 RGPD2P0DJD1 1756 aa22.01■■□□□ 1.11
TMEM53-203ENST00000372242 SPATA31A5Q5VU36 1347 aa22■■□□□ 1.11
TMEM53-203ENST00000372242 SPATA31A7Q8IWB4 1347 aa22■■□□□ 1.11
TMEM53-203ENST00000372242 GJD4Q96KN9 370 aaPredicted RBP22■■□□□ 1.11
TMEM53-203ENST00000372242 NBPF6Q5VWK0 638 aa21.99■■□□□ 1.11
TMEM53-203ENST00000372242 NBPF4Q96M43 638 aa21.99■■□□□ 1.11
TMEM53-203ENST00000372242 SPATA31A1Q5TZJ5 1347 aa21.99■■□□□ 1.11
TMEM53-203ENST00000372242 GLI3P10071 1580 aa21.98■■□□□ 1.11
TMEM53-203ENST00000372242 USHBP1Q8N6Y0 703 aa21.97■■□□□ 1.11
TMEM53-203ENST00000372242 CFAP53Q96M91 514 aa21.97■■□□□ 1.11
TMEM53-203ENST00000372242 COL3A1P02461 1466 aaPredicted RBP21.97■■□□□ 1.11
TMEM53-203ENST00000372242 IL13P35225 146 aa21.96■■□□□ 1.11
TMEM53-203ENST00000372242 CARD10Q9BWT7 1032 aa21.96■■□□□ 1.11
TMEM53-203ENST00000372242 FAM208AQ9UK61 1670 aaKnown RBP21.96■■□□□ 1.11
TMEM53-203ENST00000372242 DIAPH1O60610 1272 aaKnown RBP21.96■■□□□ 1.11
TMEM53-203ENST00000372242 EYA1Q99502 592 aa21.96■■□□□ 1.11
TMEM53-203ENST00000372242 RXRBP28702 533 aa21.95■■□□□ 1.1
TMEM53-203ENST00000372242 RBM6P78332 1123 aaKnown RBP21.95■■□□□ 1.1
TMEM53-203ENST00000372242 TCP11L2Q8N4U5 519 aa21.95■■□□□ 1.1
TMEM53-203ENST00000372242 FAM98CQ17RN3 349 aaKnown RBP21.94■■□□□ 1.1
TMEM53-203ENST00000372242 CCDC184Q52MB2 194 aa21.92■■□□□ 1.1
TMEM53-203ENST00000372242 IGSF1Q8N6C5 1336 aa21.9■■□□□ 1.1
TMEM53-203ENST00000372242 U2SURPO15042 1029 aaKnown RBP21.9■■□□□ 1.1
TMEM53-203ENST00000372242 THRAP3Q9Y2W1 955 aaKnown RBP21.9■■□□□ 1.1
TMEM53-203ENST00000372242 A0A0G2JS52 829 aa21.9■■□□□ 1.1
TMEM53-203ENST00000372242 MYT1Q01538 1121 aa21.9■■□□□ 1.1
TMEM53-203ENST00000372242 RGPD1P0DJD0 1748 aa21.89■■□□□ 1.1
TMEM53-203ENST00000372242 BARGINQ6ZT62 677 aa21.89■■□□□ 1.09
TMEM53-203ENST00000372242 AEBP1Q8IUX7 1158 aa21.89■■□□□ 1.09
TMEM53-203ENST00000372242 HMOX1P09601 288 aa21.87■■□□□ 1.09
TMEM53-203ENST00000372242 SULT6B1Q6IMI4 303 aa21.87■■□□□ 1.09
TMEM53-203ENST00000372242 ONECUT3O60422 494 aaPredicted RBP21.87■■□□□ 1.09
TMEM53-203ENST00000372242 NUDCQ9Y266 331 aa21.87■■□□□ 1.09
TMEM53-203ENST00000372242 NCAPD2Q15021 1401 aa21.87■■□□□ 1.09
TMEM53-203ENST00000372242 WNK3Q9BYP7 1800 aa21.86■■□□□ 1.09
TMEM53-203ENST00000372242 IL2RBP14784 551 aa21.86■■□□□ 1.09
TMEM53-203ENST00000372242 SEPT12Q8IYM1 358 aa21.86■■□□□ 1.09
TMEM53-203ENST00000372242 DISP2A7MBM2 1401 aa21.85■■□□□ 1.09
TMEM53-203ENST00000372242 MEGF6O75095 1541 aa21.85■■□□□ 1.09
TMEM53-203ENST00000372242 RGS12O14924 1447 aa21.85■■□□□ 1.09
TMEM53-203ENST00000372242 U2AF1L5P0DN76 240 aaPredicted RBP21.85■■□□□ 1.09
TMEM53-203ENST00000372242 U2AF1Q01081 240 aaKnown RBP eCLIP21.85■■□□□ 1.09
TMEM53-203ENST00000372242 RAPGEF4Q8WZA2 1011 aa21.85■■□□□ 1.09
TMEM53-203ENST00000372242 THSD7AQ9UPZ6 1657 aa21.85■■□□□ 1.09
TMEM53-203ENST00000372242 MIER1Q8N108 512 aa21.84■■□□□ 1.09
TMEM53-203ENST00000372242 MRS2Q9HD23 443 aa21.84■■□□□ 1.09
TMEM53-203ENST00000372242 KDRP35968 1356 aa21.83■■□□□ 1.08
TMEM53-203ENST00000372242 TATP17735 454 aaPredicted RBP21.81■■□□□ 1.08
TMEM53-203ENST00000372242 CDCA7Q9BWT1 371 aaPredicted RBP21.81■■□□□ 1.08
TMEM53-203ENST00000372242 PARP4Q9UKK3 1724 aaKnown RBP21.8■■□□□ 1.08
TMEM53-203ENST00000372242 LRRC37A3O60309 1634 aa21.8■■□□□ 1.08
TMEM53-203ENST00000372242 BRWD3Q6RI45 1802 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms