RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.52■■□□□ 1.84
TMEM53-201ENST00000372235 WDR17Q8IZU2 1322 aa26.52■■□□□ 1.84
TMEM53-201ENST00000372235 CDCA8Q53HL2 280 aa26.51■■□□□ 1.83
TMEM53-201ENST00000372235 CD163L1Q9NR16 1453 aa26.5■■□□□ 1.83
TMEM53-201ENST00000372235 TMF1P82094 1093 aa26.5■■□□□ 1.83
TMEM53-201ENST00000372235 DISP2A7MBM2 1401 aa26.49■■□□□ 1.83
TMEM53-201ENST00000372235 CSB-PGBD3P0DP91 1061 aa26.48■■□□□ 1.83
TMEM53-201ENST00000372235 SOX12O15370 315 aa26.47■■□□□ 1.83
TMEM53-201ENST00000372235 FAM182BQ5T319 152 aa26.47■■□□□ 1.83
TMEM53-201ENST00000372235 COL18A1P39060 1754 aa26.47■■□□□ 1.83
TMEM53-201ENST00000372235 USP54Q70EL1 1684 aa26.47■■□□□ 1.83
TMEM53-201ENST00000372235 A0A1W2PP64 1363 aa26.46■■□□□ 1.83
TMEM53-201ENST00000372235 USP47Q96K76 1375 aa26.46■■□□□ 1.83
TMEM53-201ENST00000372235 NFAT5O94916 1531 aa26.46■■□□□ 1.83
TMEM53-201ENST00000372235 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
TMEM53-201ENST00000372235 AXIN2Q9Y2T1 843 aa26.46■■□□□ 1.83
TMEM53-201ENST00000372235 PARD3Q8TEW0 1356 aa26.46■■□□□ 1.83
TMEM53-201ENST00000372235 PARP4Q9UKK3 1724 aaKnown RBP26.45■■□□□ 1.83
TMEM53-201ENST00000372235 CARD10Q9BWT7 1032 aa26.45■■□□□ 1.82
TMEM53-201ENST00000372235 DDB1Q16531 1140 aa26.44■■□□□ 1.82
TMEM53-201ENST00000372235 NME9Q86XW9 330 aa26.44■■□□□ 1.82
TMEM53-201ENST00000372235 TRIM37O94972 964 aa26.43■■□□□ 1.82
TMEM53-201ENST00000372235 CCDC7Q96M83 1385 aa26.43■■□□□ 1.82
TMEM53-201ENST00000372235 EN1Q05925 392 aaPredicted RBP26.42■■□□□ 1.82
TMEM53-201ENST00000372235 OVOS2A0A0G2JMS6 1433 aa26.4■■□□□ 1.82
TMEM53-201ENST00000372235 OVOS2A0A0J9YW53 1432 aa26.4■■□□□ 1.82
TMEM53-201ENST00000372235 OVOS2Q6IE36 1432 aa26.4■■□□□ 1.82
TMEM53-201ENST00000372235 APBA3O96018 575 aa26.4■■□□□ 1.82
TMEM53-201ENST00000372235 ANKRD36BQ8N2N9 1353 aa26.4■■□□□ 1.82
TMEM53-201ENST00000372235 COG3Q96JB2 828 aa26.39■■□□□ 1.82
TMEM53-201ENST00000372235 TNS1Q9HBL0 1735 aaKnown RBP26.37■■□□□ 1.81
TMEM53-201ENST00000372235 ERBB3P21860 1342 aa26.36■■□□□ 1.81
TMEM53-201ENST00000372235 EXOC5O00471 708 aa26.35■■□□□ 1.81
TMEM53-201ENST00000372235 CAMKK2Q96RR4 588 aa26.35■■□□□ 1.81
TMEM53-201ENST00000372235 EZH2Q15910 746 aaKnown RBP26.33■■□□□ 1.81
TMEM53-201ENST00000372235 RGPD5Q99666 1765 aa26.33■■□□□ 1.8
TMEM53-201ENST00000372235 LRRC37A3O60309 1634 aa26.32■■□□□ 1.8
TMEM53-201ENST00000372235 BCL9O00512 1426 aa26.32■■□□□ 1.8
TMEM53-201ENST00000372235 NLRP2Q9NX02 1062 aa26.31■■□□□ 1.8
TMEM53-201ENST00000372235 LTN1O94822 1766 aa26.3■■□□□ 1.8
TMEM53-201ENST00000372235 WNK3Q9BYP7 1800 aa26.3■■□□□ 1.8
TMEM53-201ENST00000372235 NBPF14Q5TI25 921 aa26.3■■□□□ 1.8
TMEM53-201ENST00000372235 ANKRD24Q8TF21 1146 aa26.3■■□□□ 1.8
TMEM53-201ENST00000372235 IP6K1Q92551 441 aa26.3■■□□□ 1.8
TMEM53-201ENST00000372235 CCER1Q8TC90 406 aaPredicted RBP26.29■■□□□ 1.8
TMEM53-201ENST00000372235 BCL11BQ9C0K0 894 aaPredicted RBP26.28■■□□□ 1.8
TMEM53-201ENST00000372235 PLSCR1O15162 318 aa26.27■■□□□ 1.8
TMEM53-201ENST00000372235 IL2RBP14784 551 aa26.27■■□□□ 1.8
TMEM53-201ENST00000372235 PEAK1Q9H792 1746 aa26.26■■□□□ 1.79
TMEM53-201ENST00000372235 AMPHP49418 695 aa26.25■■□□□ 1.79
TMEM53-201ENST00000372235 MARCH10Q8NA82 808 aaPredicted RBP26.25■■□□□ 1.79
TMEM53-201ENST00000372235 TNS2Q63HR2 1409 aa26.24■■□□□ 1.79
TMEM53-201ENST00000372235 PSDA5PKW4 1024 aaPredicted RBP26.24■■□□□ 1.79
TMEM53-201ENST00000372235 RTL1A6NKG5 1358 aa26.23■■□□□ 1.79
TMEM53-201ENST00000372235 FYB1O15117 783 aa26.23■■□□□ 1.79
TMEM53-201ENST00000372235 FAM208AQ9UK61 1670 aaKnown RBP26.22■■□□□ 1.79
TMEM53-201ENST00000372235 R3HDM1Q15032 1099 aaKnown RBP26.22■■□□□ 1.79
TMEM53-201ENST00000372235 MAP3K19Q56UN5 1328 aa26.21■■□□□ 1.79
TMEM53-201ENST00000372235 LRP5O75197 1615 aa26.21■■□□□ 1.79
TMEM53-201ENST00000372235 RGPD3A6NKT7 1758 aaPredicted RBP26.2■■□□□ 1.79
TMEM53-201ENST00000372235 RGPD4Q7Z3J3 1758 aa26.2■■□□□ 1.79
TMEM53-201ENST00000372235 HOXC9P31274 260 aa26.2■■□□□ 1.78
TMEM53-201ENST00000372235 EIF4G2P78344 907 aaKnown RBP eCLIP26.2■■□□□ 1.78
TMEM53-201ENST00000372235 RREB1Q92766 1687 aa26.19■■□□□ 1.78
TMEM53-201ENST00000372235 GGNBP2Q9H3C7 697 aa26.18■■□□□ 1.78
TMEM53-201ENST00000372235 SBF2Q86WG5 1849 aa26.18■■□□□ 1.78
TMEM53-201ENST00000372235 KIF24Q5T7B8 1368 aa26.18■■□□□ 1.78
TMEM53-201ENST00000372235 SMG6Q86US8 1419 aaKnown RBP26.17■■□□□ 1.78
TMEM53-201ENST00000372235 LTV1Q96GA3 475 aaPredicted RBP26.15■■□□□ 1.78
TMEM53-201ENST00000372235 NUP188Q5SRE5 1749 aa26.13■■□□□ 1.77
TMEM53-201ENST00000372235 CGNL1Q0VF96 1302 aa26.13■■□□□ 1.77
TMEM53-201ENST00000372235 KIF20BQ96Q89 1820 aa26.11■■□□□ 1.77
TMEM53-201ENST00000372235 NSD3Q9BZ95 1437 aa26.11■■□□□ 1.77
TMEM53-201ENST00000372235 RRS1Q15050 365 aaKnown RBP26.1■■□□□ 1.77
TMEM53-201ENST00000372235 MYOM1P52179 1685 aa26.09■■□□□ 1.77
TMEM53-201ENST00000372235 FLT4P35916 1363 aa26.09■■□□□ 1.77
TMEM53-201ENST00000372235 CARD14Q9BXL6 1004 aa26.09■■□□□ 1.77
TMEM53-201ENST00000372235 INSRP06213 1382 aa26.08■■□□□ 1.77
TMEM53-201ENST00000372235 SRCAPQ6ZRS2 3230 aa26.06■■□□□ 1.76
TMEM53-201ENST00000372235 FBLN1P23142 703 aa26.06■■□□□ 1.76
TMEM53-201ENST00000372235 NHSQ6T4R5 1651 aa26.06■■□□□ 1.76
TMEM53-201ENST00000372235 HSPA5P11021 654 aaKnown RBP26.05■■□□□ 1.76
TMEM53-201ENST00000372235 TXNRD1Q16881 649 aa26.05■■□□□ 1.76
TMEM53-201ENST00000372235 DDX54Q8TDD1 881 aaKnown RBP26.05■■□□□ 1.76
TMEM53-201ENST00000372235 RAPGEF4Q8WZA2 1011 aa26.05■■□□□ 1.76
TMEM53-201ENST00000372235 POLR3GLQ9BT43 218 aa26.05■■□□□ 1.76
TMEM53-201ENST00000372235 ZCRB1Q8TBF4 217 aaKnown RBP26.04■■□□□ 1.76
TMEM53-201ENST00000372235 PTF1AQ7RTS3 328 aa26.03■■□□□ 1.76
TMEM53-201ENST00000372235 ACSBG1Q96GR2 724 aa26.03■■□□□ 1.76
TMEM53-201ENST00000372235 KCNQ2O43526 872 aa26.02■■□□□ 1.76
TMEM53-201ENST00000372235 STK32BQ9NY57 414 aa26.02■■□□□ 1.76
TMEM53-201ENST00000372235 HSP90AB2PQ58FF8 381 aa26.01■■□□□ 1.75
TMEM53-201ENST00000372235 NBPF6Q5VWK0 638 aa26.01■■□□□ 1.75
TMEM53-201ENST00000372235 PROM2Q8N271 834 aa26.01■■□□□ 1.75
TMEM53-201ENST00000372235 NBPF4Q96M43 638 aa26.01■■□□□ 1.75
TMEM53-201ENST00000372235 SPON1Q9HCB6 807 aa26.01■■□□□ 1.75
TMEM53-201ENST00000372235 TATP17735 454 aaPredicted RBP26■■□□□ 1.75
TMEM53-201ENST00000372235 HMGB2P26583 209 aaKnown RBP25.99■■□□□ 1.75
TMEM53-201ENST00000372235 NSD2O96028 1365 aa25.96■■□□□ 1.75
TMEM53-201ENST00000372235 WASHC2AQ641Q2 1341 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms