RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 ADAMTS2O95450 1211 aa17.65■□□□□ 0.42
TTC39A-204ENST00000371750 CHRNA2Q15822 529 aa17.65■□□□□ 0.42
TTC39A-204ENST00000371750 PRDM11Q9NQV5 511 aa17.65■□□□□ 0.42
TTC39A-204ENST00000371750 KIF24Q5T7B8 1368 aa17.65■□□□□ 0.42
TTC39A-204ENST00000371750 AMPHP49418 695 aa17.65■□□□□ 0.42
TTC39A-204ENST00000371750 HOXC9P31274 260 aa17.64■□□□□ 0.41
TTC39A-204ENST00000371750 CCDC184Q52MB2 194 aa17.64■□□□□ 0.41
TTC39A-204ENST00000371750 NRAPQ86VF7 1730 aa17.64■□□□□ 0.41
TTC39A-204ENST00000371750 CAMTA1Q9Y6Y1 1673 aa17.63■□□□□ 0.41
TTC39A-204ENST00000371750 BLMP54132 1417 aaPredicted RBP17.63■□□□□ 0.41
TTC39A-204ENST00000371750 HSP90AB2PQ58FF8 381 aa17.62■□□□□ 0.41
TTC39A-204ENST00000371750 INSRP06213 1382 aa17.61■□□□□ 0.41
TTC39A-204ENST00000371750 IP6K1Q92551 441 aa17.61■□□□□ 0.41
TTC39A-204ENST00000371750 NWD2Q9ULI1 1742 aa17.61■□□□□ 0.41
TTC39A-204ENST00000371750 FAM83GA6ND36 823 aa17.6■□□□□ 0.41
TTC39A-204ENST00000371750 AXIN2Q9Y2T1 843 aa17.6■□□□□ 0.41
TTC39A-204ENST00000371750 COL5A2P05997 1499 aaPredicted RBP17.6■□□□□ 0.41
TTC39A-204ENST00000371750 FAM208AQ9UK61 1670 aaKnown RBP17.6■□□□□ 0.41
TTC39A-204ENST00000371750 RGPD2P0DJD1 1756 aa17.6■□□□□ 0.41
TTC39A-204ENST00000371750 RGPD1P0DJD0 1748 aa17.6■□□□□ 0.41
TTC39A-204ENST00000371750 CFAP53Q96M91 514 aa17.59■□□□□ 0.41
TTC39A-204ENST00000371750 MRS2Q9HD23 443 aa17.59■□□□□ 0.41
TTC39A-204ENST00000371750 SLIT2O94813 1529 aa17.59■□□□□ 0.41
TTC39A-204ENST00000371750 CCER2I3L3R5 266 aa17.58■□□□□ 0.4
TTC39A-204ENST00000371750 C8orf37Q96NL8 207 aa17.58■□□□□ 0.4
TTC39A-204ENST00000371750 EIF4A2Q14240 407 aaKnown RBP17.57■□□□□ 0.4
TTC39A-204ENST00000371750 MEX3CQ5U5Q3 659 aaKnown RBP17.57■□□□□ 0.4
TTC39A-204ENST00000371750 ILDR1Q86SU0 546 aaPredicted RBP17.57■□□□□ 0.4
TTC39A-204ENST00000371750 LTV1Q96GA3 475 aaPredicted RBP17.57■□□□□ 0.4
TTC39A-204ENST00000371750 ERBB3P21860 1342 aa17.57■□□□□ 0.4
TTC39A-204ENST00000371750 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.56■□□□□ 0.4
TTC39A-204ENST00000371750 ANKRD24Q8TF21 1146 aa17.56■□□□□ 0.4
TTC39A-204ENST00000371750 BTG4Q9NY30 223 aa17.56■□□□□ 0.4
TTC39A-204ENST00000371750 DIAPH1O60610 1272 aaKnown RBP17.55■□□□□ 0.4
TTC39A-204ENST00000371750 IL13P35225 146 aa17.55■□□□□ 0.4
TTC39A-204ENST00000371750 NGLY1Q96IV0 654 aa17.53■□□□□ 0.4
TTC39A-204ENST00000371750 STRN4Q9NRL3 753 aa17.53■□□□□ 0.4
TTC39A-204ENST00000371750 BCL9LQ86UU0 1499 aa17.53■□□□□ 0.4
TTC39A-204ENST00000371750 CSB-PGBD3P0DP91 1061 aa17.52■□□□□ 0.39
TTC39A-204ENST00000371750 WDR17Q8IZU2 1322 aa17.52■□□□□ 0.39
TTC39A-204ENST00000371750 U2SURPO15042 1029 aaKnown RBP17.51■□□□□ 0.39
TTC39A-204ENST00000371750 AFF2P51816 1311 aa17.51■□□□□ 0.39
TTC39A-204ENST00000371750 WNK3Q9BYP7 1800 aa17.51■□□□□ 0.39
TTC39A-204ENST00000371750 CRB1P82279 1406 aa17.5■□□□□ 0.39
TTC39A-204ENST00000371750 NCAPD2Q15021 1401 aa17.5■□□□□ 0.39
TTC39A-204ENST00000371750 IGSF1Q8N6C5 1336 aa17.5■□□□□ 0.39
TTC39A-204ENST00000371750 LARP1Q6PKG0 1096 aaKnown RBP17.5■□□□□ 0.39
TTC39A-204ENST00000371750 FNBP4Q8N3X1 1017 aaPredicted RBP17.5■□□□□ 0.39
TTC39A-204ENST00000371750 EYA1Q99502 592 aa17.5■□□□□ 0.39
TTC39A-204ENST00000371750 NBPF6Q5VWK0 638 aa17.49■□□□□ 0.39
TTC39A-204ENST00000371750 USHBP1Q8N6Y0 703 aa17.49■□□□□ 0.39
TTC39A-204ENST00000371750 PNISRQ8TF01 805 aaKnown RBP17.49■□□□□ 0.39
TTC39A-204ENST00000371750 NBPF4Q96M43 638 aa17.49■□□□□ 0.39
TTC39A-204ENST00000371750 NUDCQ9Y266 331 aa17.49■□□□□ 0.39
TTC39A-204ENST00000371750 EVA1CP58658 441 aa17.48■□□□□ 0.39
TTC39A-204ENST00000371750 WDR43Q15061 677 aaKnown RBP eCLIP17.48■□□□□ 0.39
TTC39A-204ENST00000371750 NLRP2Q9NX02 1062 aa17.48■□□□□ 0.39
TTC39A-204ENST00000371750 U2AF1L5P0DN76 240 aaPredicted RBP17.47■□□□□ 0.39
TTC39A-204ENST00000371750 U2AF1Q01081 240 aaKnown RBP eCLIP17.47■□□□□ 0.39
TTC39A-204ENST00000371750 TOM1L2Q6ZVM7 507 aa17.47■□□□□ 0.39
TTC39A-204ENST00000371750 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
TTC39A-204ENST00000371750 UNC5CLQ8IV45 518 aa17.47■□□□□ 0.39
TTC39A-204ENST00000371750 USP21Q9UK80 565 aa17.47■□□□□ 0.39
TTC39A-204ENST00000371750 HMOX1P09601 288 aa17.47■□□□□ 0.39
TTC39A-204ENST00000371750 FAM9BQ8IZU0 186 aa17.46■□□□□ 0.39
TTC39A-204ENST00000371750 KDRP35968 1356 aa17.46■□□□□ 0.39
TTC39A-204ENST00000371750 PARP4Q9UKK3 1724 aaKnown RBP17.45■□□□□ 0.38
TTC39A-204ENST00000371750 ATRNO75882 1429 aa17.45■□□□□ 0.38
TTC39A-204ENST00000371750 GLI3P10071 1580 aa17.45■□□□□ 0.38
TTC39A-204ENST00000371750 SULT6B1Q6IMI4 303 aa17.45■□□□□ 0.38
TTC39A-204ENST00000371750 MEGF6O75095 1541 aa17.45■□□□□ 0.38
TTC39A-204ENST00000371750 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
TTC39A-204ENST00000371750 USP35Q9P2H5 1018 aa17.43■□□□□ 0.38
TTC39A-204ENST00000371750 CARD10Q9BWT7 1032 aa17.43■□□□□ 0.38
TTC39A-204ENST00000371750 RSPH6AQ9H0K4 717 aa17.43■□□□□ 0.38
TTC39A-204ENST00000371750 SPATA31A1Q5TZJ5 1347 aa17.42■□□□□ 0.38
TTC39A-204ENST00000371750 SPATA31A5Q5VU36 1347 aa17.42■□□□□ 0.38
TTC39A-204ENST00000371750 SPATA31A7Q8IWB4 1347 aa17.42■□□□□ 0.38
TTC39A-204ENST00000371750 VPS72Q15906 364 aa17.42■□□□□ 0.38
TTC39A-204ENST00000371750 CCDC9Q9Y3X0 531 aaKnown RBP17.42■□□□□ 0.38
TTC39A-204ENST00000371750 PKD1L3Q7Z443 1732 aa17.41■□□□□ 0.38
TTC39A-204ENST00000371750 CCDC146Q8IYE0 955 aa17.41■□□□□ 0.38
TTC39A-204ENST00000371750 DISP2A7MBM2 1401 aa17.41■□□□□ 0.38
TTC39A-204ENST00000371750 PRKAR2BP31323 418 aa17.4■□□□□ 0.38
TTC39A-204ENST00000371750 LRRC37A3O60309 1634 aa17.4■□□□□ 0.38
TTC39A-204ENST00000371750 SHANK3Q9BYB0 1731 aa17.39■□□□□ 0.37
TTC39A-204ENST00000371750 THSD7AQ9UPZ6 1657 aa17.39■□□□□ 0.37
TTC39A-204ENST00000371750 FCHSD2O94868 740 aa17.38■□□□□ 0.37
TTC39A-204ENST00000371750 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
TTC39A-204ENST00000371750 TRPC5Q9UL62 973 aaPredicted RBP17.38■□□□□ 0.37
TTC39A-204ENST00000371750 OVOS2A0A0G2JMS6 1433 aa17.38■□□□□ 0.37
TTC39A-204ENST00000371750 ZNF772Q68DY9 489 aaPredicted RBP17.37■□□□□ 0.37
TTC39A-204ENST00000371750 PLEKHF1Q96S99 279 aa17.37■□□□□ 0.37
TTC39A-204ENST00000371750 RAPGEF4Q8WZA2 1011 aa17.37■□□□□ 0.37
TTC39A-204ENST00000371750 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
TTC39A-204ENST00000371750 RGS17Q9UGC6 210 aaPredicted RBP17.36■□□□□ 0.37
TTC39A-204ENST00000371750 IL2RBP14784 551 aa17.35■□□□□ 0.37
TTC39A-204ENST00000371750 GJD4Q96KN9 370 aaPredicted RBP17.35■□□□□ 0.37
TTC39A-204ENST00000371750 PHACTR3Q96KR7 559 aa17.35■□□□□ 0.37
TTC39A-204ENST00000371750 QTRT2Q9H974 415 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms