RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 NCOA1Q15788 1441 aa9.19□□□□□ -0.94
COL21A1-203ENST00000370819 EVA1CP58658 441 aa9.18□□□□□ -0.94
COL21A1-203ENST00000370819 FERMT3Q86UX7 667 aa9.18□□□□□ -0.94
COL21A1-203ENST00000370819 TXNDC2Q86VQ3 553 aa9.18□□□□□ -0.94
COL21A1-203ENST00000370819 TNPO1Q92973 898 aaKnown RBP9.18□□□□□ -0.94
COL21A1-203ENST00000370819 IFT140Q96RY7 1462 aa9.18□□□□□ -0.94
COL21A1-203ENST00000370819 ARHGAP5Q13017 1502 aa9.18□□□□□ -0.94
COL21A1-203ENST00000370819 EHBP1L1Q8N3D4 1523 aa9.18□□□□□ -0.94
COL21A1-203ENST00000370819 IGHDP01880 384 aa9.18□□□□□ -0.94
COL21A1-203ENST00000370819 ME1P48163 572 aa9.18□□□□□ -0.94
COL21A1-203ENST00000370819 SRCIN1Q9C0H9 1055 aa9.18□□□□□ -0.94
COL21A1-203ENST00000370819 TMX4Q9H1E5 349 aaPredicted RBP9.18□□□□□ -0.94
COL21A1-203ENST00000370819 TROQ12816 1431 aaPredicted RBP9.18□□□□□ -0.94
COL21A1-203ENST00000370819 SRGAP3O43295 1099 aa9.18□□□□□ -0.94
COL21A1-203ENST00000370819 XPCQ01831 940 aaPredicted RBP9.18□□□□□ -0.94
COL21A1-203ENST00000370819 RRS1Q15050 365 aaKnown RBP9.18□□□□□ -0.94
COL21A1-203ENST00000370819 CWC27Q6UX04 472 aaKnown RBP9.18□□□□□ -0.94
COL21A1-203ENST00000370819 VPS37DQ86XT2 251 aa9.18□□□□□ -0.94
COL21A1-203ENST00000370819 RPAP2Q8IXW5 612 aaPredicted RBP9.18□□□□□ -0.94
COL21A1-203ENST00000370819 SMARCA5O60264 1052 aaPredicted RBP9.17□□□□□ -0.94
COL21A1-203ENST00000370819 NAP1L1P55209 391 aaKnown RBP9.17□□□□□ -0.94
COL21A1-203ENST00000370819 JAKMIP1Q96N16 626 aaKnown RBP9.17□□□□□ -0.94
COL21A1-203ENST00000370819 BRPF1P55201 1214 aaPredicted RBP9.17□□□□□ -0.94
COL21A1-203ENST00000370819 CCDC66A2RUB6 948 aa9.17□□□□□ -0.94
COL21A1-203ENST00000370819 FCHSD2O94868 740 aa9.17□□□□□ -0.94
COL21A1-203ENST00000370819 BLOC1S2Q6QNY1 142 aa9.17□□□□□ -0.94
COL21A1-203ENST00000370819 FAM177A1Q8N128 213 aaPredicted RBP9.17□□□□□ -0.94
COL21A1-203ENST00000370819 STK11IPQ8N1F8 1099 aa9.17□□□□□ -0.94
COL21A1-203ENST00000370819 ABTB2Q8N961 1025 aa9.17□□□□□ -0.94
COL21A1-203ENST00000370819 RUFY1Q96T51 708 aa9.17□□□□□ -0.94
COL21A1-203ENST00000370819 ACBD3Q9H3P7 528 aa9.17□□□□□ -0.94
COL21A1-203ENST00000370819 NSD3Q9BZ95 1437 aa9.17□□□□□ -0.94
COL21A1-203ENST00000370819 HIP1O00291 1037 aa9.16□□□□□ -0.94
COL21A1-203ENST00000370819 AEBP1Q8IUX7 1158 aa9.16□□□□□ -0.94
COL21A1-203ENST00000370819 EFCAB5A4FU69 1503 aa9.16□□□□□ -0.94
COL21A1-203ENST00000370819 LRPPRCP42704 1394 aaKnown RBP9.16□□□□□ -0.94
COL21A1-203ENST00000370819 DCTN1Q14203 1278 aa9.16□□□□□ -0.94
COL21A1-203ENST00000370819 NFE2L2Q16236 605 aa9.16□□□□□ -0.94
COL21A1-203ENST00000370819 NUP62CLQ9H1M0 184 aa9.16□□□□□ -0.94
COL21A1-203ENST00000370819 MIS18AQ9NYP9 233 aa9.16□□□□□ -0.94
COL21A1-203ENST00000370819 PBRM1Q86U86 1689 aa9.16□□□□□ -0.94
COL21A1-203ENST00000370819 FYB1O15117 783 aa9.15□□□□□ -0.94
COL21A1-203ENST00000370819 SERPINC1P01008 464 aa9.15□□□□□ -0.94
COL21A1-203ENST00000370819 TRIM27P14373 513 aa9.15□□□□□ -0.94
COL21A1-203ENST00000370819 MAPK8IP2Q13387 824 aaPredicted RBP9.15□□□□□ -0.94
COL21A1-203ENST00000370819 DDX54Q8TDD1 881 aaKnown RBP9.15□□□□□ -0.94
COL21A1-203ENST00000370819 SPATA32Q96LK8 384 aa9.15□□□□□ -0.94
COL21A1-203ENST00000370819 ZNF396Q96N95 335 aaPredicted RBP9.15□□□□□ -0.94
COL21A1-203ENST00000370819 MTMR7Q9Y216 660 aa9.15□□□□□ -0.94
COL21A1-203ENST00000370819 NKTRP30414 1462 aaKnown RBP9.15□□□□□ -0.94
COL21A1-203ENST00000370819 SKIDA1Q1XH10 827 aa9.15□□□□□ -0.94
COL21A1-203ENST00000370819 ERC1Q8IUD2 1116 aa9.15□□□□□ -0.94
COL21A1-203ENST00000370819 NUTM1Q86Y26 1132 aa9.15□□□□□ -0.95
COL21A1-203ENST00000370819 TBC1D32Q96NH3 1257 aa9.15□□□□□ -0.95
COL21A1-203ENST00000370819 GDPD2Q9HCC8 539 aa9.15□□□□□ -0.95
COL21A1-203ENST00000370819 PDRG1Q9NUG6 133 aa9.15□□□□□ -0.95
COL21A1-203ENST00000370819 RRP12Q5JTH9 1297 aaKnown RBP9.14□□□□□ -0.95
COL21A1-203ENST00000370819 ANKRD1Q15327 319 aa9.14□□□□□ -0.95
COL21A1-203ENST00000370819 CAMK4Q16566 473 aa9.14□□□□□ -0.95
COL21A1-203ENST00000370819 AACSQ86V21 672 aa9.14□□□□□ -0.95
COL21A1-203ENST00000370819 CAGE1Q8TC20 777 aa9.14□□□□□ -0.95
COL21A1-203ENST00000370819 AK7Q96M32 723 aa9.14□□□□□ -0.95
COL21A1-203ENST00000370819 NOL10Q9BSC4 688 aaKnown RBP9.14□□□□□ -0.95
COL21A1-203ENST00000370819 PRDM10Q9NQV6 1147 aa9.14□□□□□ -0.95
COL21A1-203ENST00000370819 GRIN2BQ13224 1484 aa9.14□□□□□ -0.95
COL21A1-203ENST00000370819 EIF4G3O43432 1585 aaKnown RBP9.14□□□□□ -0.95
COL21A1-203ENST00000370819 AMOTL1Q8IY63 956 aa9.14□□□□□ -0.95
COL21A1-203ENST00000370819 PDCL2Q8N4E4 241 aa9.14□□□□□ -0.95
COL21A1-203ENST00000370819 DDX11Q96FC9 970 aa9.14□□□□□ -0.95
COL21A1-203ENST00000370819 SYNJ2O15056 1496 aa9.14□□□□□ -0.95
COL21A1-203ENST00000370819 CDK13Q14004 1512 aaKnown RBP9.13□□□□□ -0.95
COL21A1-203ENST00000370819 OFD1O75665 1012 aa9.13□□□□□ -0.95
COL21A1-203ENST00000370819 CASTP20810 708 aaKnown RBP9.13□□□□□ -0.95
COL21A1-203ENST00000370819 NOM1Q5C9Z4 860 aaKnown RBP9.13□□□□□ -0.95
COL21A1-203ENST00000370819 CCDC83Q8IWF9 413 aa9.13□□□□□ -0.95
COL21A1-203ENST00000370819 PANK2Q9BZ23 570 aa9.13□□□□□ -0.95
COL21A1-203ENST00000370819 USP25Q9UHP3 1055 aa9.13□□□□□ -0.95
COL21A1-203ENST00000370819 MAP3K11Q16584 847 aa9.13□□□□□ -0.95
COL21A1-203ENST00000370819 MCM10Q7L590 875 aa9.13□□□□□ -0.95
COL21A1-203ENST00000370819 FAM177BA6PVY3 158 aa9.13□□□□□ -0.95
COL21A1-203ENST00000370819 PCDHB15Q9Y5E8 787 aa9.13□□□□□ -0.95
COL21A1-203ENST00000370819 XBP1P17861 261 aa9.12□□□□□ -0.95
COL21A1-203ENST00000370819 FAM69CQ0P6D2 419 aa9.12□□□□□ -0.95
COL21A1-203ENST00000370819 FILIP1LQ4L180 1135 aa9.12□□□□□ -0.95
COL21A1-203ENST00000370819 PLEKHO1Q53GL0 409 aaPredicted RBP9.12□□□□□ -0.95
COL21A1-203ENST00000370819 ZNF530Q6P9A1 599 aaPredicted RBP9.12□□□□□ -0.95
COL21A1-203ENST00000370819 H0YHG0 523 aa9.12□□□□□ -0.95
COL21A1-203ENST00000370819 MX1P20591 662 aa9.12□□□□□ -0.95
COL21A1-203ENST00000370819 TBC1D9Q6ZT07 1266 aa9.12□□□□□ -0.95
COL21A1-203ENST00000370819 CEP57L1Q8IYX8 460 aa9.12□□□□□ -0.95
COL21A1-203ENST00000370819 JMYQ8N9B5 988 aa9.12□□□□□ -0.95
COL21A1-203ENST00000370819 LARP6Q9BRS8 491 aaKnown RBP9.12□□□□□ -0.95
COL21A1-203ENST00000370819 CWC15Q9P013 229 aaKnown RBP9.12□□□□□ -0.95
COL21A1-203ENST00000370819 PPP6R1Q9UPN7 881 aa9.12□□□□□ -0.95
COL21A1-203ENST00000370819 F6X3S4 739 aa9.12□□□□□ -0.95
COL21A1-203ENST00000370819 BAG4O95429 457 aaKnown RBP9.12□□□□□ -0.95
COL21A1-203ENST00000370819 XRCC6P12956 609 aaKnown RBP eCLIP9.12□□□□□ -0.95
COL21A1-203ENST00000370819 CBX1P83916 185 aa9.12□□□□□ -0.95
COL21A1-203ENST00000370819 SART3Q15020 963 aaKnown RBP9.12□□□□□ -0.95
COL21A1-203ENST00000370819 ZSCAN31Q96LW9 406 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms