RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 TERF2IPQ9NYB0 399 aa22.81■■□□□ 1.24
VMA21-202ENST00000370361 LRP5O75197 1615 aa22.81■■□□□ 1.24
VMA21-202ENST00000370361 NFAT5O94916 1531 aa22.81■■□□□ 1.24
VMA21-202ENST00000370361 ZBTB7CA1YPR0 619 aa22.8■■□□□ 1.24
VMA21-202ENST00000370361 TRIM37O94972 964 aa22.8■■□□□ 1.24
VMA21-202ENST00000370361 TOM1L2Q6ZVM7 507 aa22.8■■□□□ 1.24
VMA21-202ENST00000370361 EDC4Q6P2E9 1401 aaKnown RBP22.8■■□□□ 1.24
VMA21-202ENST00000370361 OVOS2A0A0G2JMS6 1433 aa22.79■■□□□ 1.24
VMA21-202ENST00000370361 OVOS2A0A0J9YW53 1432 aa22.79■■□□□ 1.24
VMA21-202ENST00000370361 OVOS2Q6IE36 1432 aa22.79■■□□□ 1.24
VMA21-202ENST00000370361 CD163L1Q9NR16 1453 aa22.78■■□□□ 1.24
VMA21-202ENST00000370361 TMC1Q8TDI8 760 aa22.77■■□□□ 1.24
VMA21-202ENST00000370361 LRRC37A3O60309 1634 aa22.76■■□□□ 1.23
VMA21-202ENST00000370361 WNK3Q9BYP7 1800 aa22.76■■□□□ 1.23
VMA21-202ENST00000370361 APBA3O96018 575 aa22.76■■□□□ 1.23
VMA21-202ENST00000370361 DDB1Q16531 1140 aa22.76■■□□□ 1.23
VMA21-202ENST00000370361 CAMKK2Q96RR4 588 aa22.76■■□□□ 1.23
VMA21-202ENST00000370361 CARD10Q9BWT7 1032 aa22.76■■□□□ 1.23
VMA21-202ENST00000370361 CCDC7Q96M83 1385 aa22.76■■□□□ 1.23
VMA21-202ENST00000370361 BCL9O00512 1426 aa22.74■■□□□ 1.23
VMA21-202ENST00000370361 AXIN2Q9Y2T1 843 aa22.74■■□□□ 1.23
VMA21-202ENST00000370361 CSB-PGBD3P0DP91 1061 aa22.73■■□□□ 1.23
VMA21-202ENST00000370361 EZH2Q15910 746 aaKnown RBP22.73■■□□□ 1.23
VMA21-202ENST00000370361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.73■■□□□ 1.23
VMA21-202ENST00000370361 PEAK1Q9H792 1746 aa22.73■■□□□ 1.23
VMA21-202ENST00000370361 RREB1Q92766 1687 aa22.72■■□□□ 1.23
VMA21-202ENST00000370361 RGPD3A6NKT7 1758 aaPredicted RBP22.72■■□□□ 1.23
VMA21-202ENST00000370361 RGPD4Q7Z3J3 1758 aa22.72■■□□□ 1.23
VMA21-202ENST00000370361 SLC12A5Q9H2X9 1139 aa22.72■■□□□ 1.23
VMA21-202ENST00000370361 A0A1W2PP64 1363 aa22.72■■□□□ 1.23
VMA21-202ENST00000370361 TESK2Q96S53 571 aa22.71■■□□□ 1.23
VMA21-202ENST00000370361 TIMELESSQ9UNS1 1208 aa22.71■■□□□ 1.23
VMA21-202ENST00000370361 RGPD5Q99666 1765 aa22.71■■□□□ 1.23
VMA21-202ENST00000370361 ST20-MTHFSA0A0A6YYL1 179 aa22.7■■□□□ 1.22
VMA21-202ENST00000370361 SOX12O15370 315 aa22.7■■□□□ 1.22
VMA21-202ENST00000370361 CLSPNQ9HAW4 1339 aa22.7■■□□□ 1.22
VMA21-202ENST00000370361 NBPF14Q5TI25 921 aa22.68■■□□□ 1.22
VMA21-202ENST00000370361 NME9Q86XW9 330 aa22.68■■□□□ 1.22
VMA21-202ENST00000370361 ERBB3P21860 1342 aa22.67■■□□□ 1.22
VMA21-202ENST00000370361 PSDA5PKW4 1024 aaPredicted RBP22.67■■□□□ 1.22
VMA21-202ENST00000370361 LTN1O94822 1766 aa22.67■■□□□ 1.22
VMA21-202ENST00000370361 PLSCR1O15162 318 aa22.66■■□□□ 1.22
VMA21-202ENST00000370361 R3HDM1Q15032 1099 aaKnown RBP22.66■■□□□ 1.22
VMA21-202ENST00000370361 CDCA8Q53HL2 280 aa22.66■■□□□ 1.22
VMA21-202ENST00000370361 SBF2Q86WG5 1849 aa22.66■■□□□ 1.22
VMA21-202ENST00000370361 NUP188Q5SRE5 1749 aa22.65■■□□□ 1.22
VMA21-202ENST00000370361 EXOC5O00471 708 aa22.65■■□□□ 1.22
VMA21-202ENST00000370361 TMF1P82094 1093 aa22.65■■□□□ 1.22
VMA21-202ENST00000370361 BCL11BQ9C0K0 894 aaPredicted RBP22.65■■□□□ 1.22
VMA21-202ENST00000370361 TNS2Q63HR2 1409 aa22.65■■□□□ 1.22
VMA21-202ENST00000370361 ANKRD36BQ8N2N9 1353 aa22.64■■□□□ 1.22
VMA21-202ENST00000370361 USP47Q96K76 1375 aa22.64■■□□□ 1.22
VMA21-202ENST00000370361 FAM208AQ9UK61 1670 aaKnown RBP22.63■■□□□ 1.21
VMA21-202ENST00000370361 MARCH10Q8NA82 808 aaPredicted RBP22.61■■□□□ 1.21
VMA21-202ENST00000370361 COG3Q96JB2 828 aa22.61■■□□□ 1.21
VMA21-202ENST00000370361 NLRP2Q9NX02 1062 aa22.6■■□□□ 1.21
VMA21-202ENST00000370361 ANKRD24Q8TF21 1146 aa22.59■■□□□ 1.21
VMA21-202ENST00000370361 IP6K1Q92551 441 aa22.59■■□□□ 1.21
VMA21-202ENST00000370361 IL2RBP14784 551 aa22.58■■□□□ 1.21
VMA21-202ENST00000370361 RTL1A6NKG5 1358 aa22.55■■□□□ 1.2
VMA21-202ENST00000370361 NHSQ6T4R5 1651 aa22.53■■□□□ 1.2
VMA21-202ENST00000370361 KIF24Q5T7B8 1368 aa22.5■■□□□ 1.19
VMA21-202ENST00000370361 AMPHP49418 695 aa22.5■■□□□ 1.19
VMA21-202ENST00000370361 MAP3K19Q56UN5 1328 aa22.5■■□□□ 1.19
VMA21-202ENST00000370361 HOXC9P31274 260 aa22.49■■□□□ 1.19
VMA21-202ENST00000370361 SPON1Q9HCB6 807 aa22.48■■□□□ 1.19
VMA21-202ENST00000370361 SMG6Q86US8 1419 aaKnown RBP22.48■■□□□ 1.19
VMA21-202ENST00000370361 FYB1O15117 783 aa22.47■■□□□ 1.19
VMA21-202ENST00000370361 KIF20BQ96Q89 1820 aa22.47■■□□□ 1.19
VMA21-202ENST00000370361 CGNL1Q0VF96 1302 aa22.46■■□□□ 1.19
VMA21-202ENST00000370361 KCNQ2O43526 872 aa22.45■■□□□ 1.18
VMA21-202ENST00000370361 TXNRD1Q16881 649 aa22.45■■□□□ 1.18
VMA21-202ENST00000370361 PCGF6Q9BYE7 350 aa22.44■■□□□ 1.18
VMA21-202ENST00000370361 PTF1AQ7RTS3 328 aa22.43■■□□□ 1.18
VMA21-202ENST00000370361 PROM2Q8N271 834 aa22.43■■□□□ 1.18
VMA21-202ENST00000370361 STK32BQ9NY57 414 aa22.43■■□□□ 1.18
VMA21-202ENST00000370361 MYOM1P52179 1685 aa22.42■■□□□ 1.18
VMA21-202ENST00000370361 LTV1Q96GA3 475 aaPredicted RBP22.42■■□□□ 1.18
VMA21-202ENST00000370361 GGNBP2Q9H3C7 697 aa22.42■■□□□ 1.18
VMA21-202ENST00000370361 FLT4P35916 1363 aa22.41■■□□□ 1.18
VMA21-202ENST00000370361 CASZ1Q86V15 1759 aa22.41■■□□□ 1.18
VMA21-202ENST00000370361 ANO8Q9HCE9 1232 aaPredicted RBP22.41■■□□□ 1.18
VMA21-202ENST00000370361 INSRP06213 1382 aa22.4■■□□□ 1.18
VMA21-202ENST00000370361 PPP1R1BQ9UD71 204 aaPredicted RBP22.4■■□□□ 1.18
VMA21-202ENST00000370361 BTAF1O14981 1849 aa22.4■■□□□ 1.18
VMA21-202ENST00000370361 RRS1Q15050 365 aaKnown RBP22.38■■□□□ 1.17
VMA21-202ENST00000370361 SLC15A2Q16348 729 aa22.38■■□□□ 1.17
VMA21-202ENST00000370361 ACSBG1Q96GR2 724 aa22.38■■□□□ 1.17
VMA21-202ENST00000370361 NSD3Q9BZ95 1437 aa22.38■■□□□ 1.17
VMA21-202ENST00000370361 HMGB2P26583 209 aaKnown RBP22.37■■□□□ 1.17
VMA21-202ENST00000370361 SLC27A3Q5K4L6 730 aa22.37■■□□□ 1.17
VMA21-202ENST00000370361 ZCRB1Q8TBF4 217 aaKnown RBP22.37■■□□□ 1.17
VMA21-202ENST00000370361 DDX54Q8TDD1 881 aaKnown RBP22.36■■□□□ 1.17
VMA21-202ENST00000370361 RAPGEF4Q8WZA2 1011 aa22.36■■□□□ 1.17
VMA21-202ENST00000370361 KAT6BQ8WYB5 2073 aa22.35■■□□□ 1.17
VMA21-202ENST00000370361 PAPPAQ13219 1627 aa22.35■■□□□ 1.17
VMA21-202ENST00000370361 MEGF6O75095 1541 aa22.34■■□□□ 1.17
VMA21-202ENST00000370361 RGPD2P0DJD1 1756 aa22.34■■□□□ 1.17
VMA21-202ENST00000370361 DCAF8L1A6NGE4 600 aa22.33■■□□□ 1.17
VMA21-202ENST00000370361 FBLN1P23142 703 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms