RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 GGNBP2Q9H3C7 697 aa13.09□□□□□ -0.31
COL11A1-203ENST00000370096 CNNM1Q9NRU3 951 aa13.09□□□□□ -0.31
COL11A1-203ENST00000370096 NOB1Q9ULX3 412 aaKnown RBP13.09□□□□□ -0.31
COL11A1-203ENST00000370096 CARMIL2Q6F5E8 1435 aa13.09□□□□□ -0.31
COL11A1-203ENST00000370096 K7ELQ4 463 aaPredicted RBP13.09□□□□□ -0.31
COL11A1-203ENST00000370096 CASQ1P31415 396 aa13.09□□□□□ -0.31
COL11A1-203ENST00000370096 TNNT1P13805 278 aa13.08□□□□□ -0.31
COL11A1-203ENST00000370096 CCDC148Q8NFR7 591 aa13.08□□□□□ -0.31
COL11A1-203ENST00000370096 CCDC91Q7Z6B0 441 aa13.08□□□□□ -0.32
COL11A1-203ENST00000370096 JMYQ8N9B5 988 aa13.08□□□□□ -0.32
COL11A1-203ENST00000370096 TAF4BQ92750 862 aa13.08□□□□□ -0.32
COL11A1-203ENST00000370096 EIF5P55010 431 aaKnown RBP13.08□□□□□ -0.32
COL11A1-203ENST00000370096 RSPH4AQ5TD94 716 aa13.08□□□□□ -0.32
COL11A1-203ENST00000370096 MCM2P49736 904 aa13.08□□□□□ -0.32
COL11A1-203ENST00000370096 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.32
COL11A1-203ENST00000370096 CRACR2AQ9BSW2 395 aa13.08□□□□□ -0.32
COL11A1-203ENST00000370096 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.32
COL11A1-203ENST00000370096 UBXN4Q92575 508 aa13.08□□□□□ -0.32
COL11A1-203ENST00000370096 UPF3BQ9BZI7 483 aaKnown RBP13.08□□□□□ -0.32
COL11A1-203ENST00000370096 SYCE3A1L190 88 aa13.08□□□□□ -0.32
COL11A1-203ENST00000370096 KRT85P78386 507 aa13.08□□□□□ -0.32
COL11A1-203ENST00000370096 JAKMIP3Q5VZ66 844 aa13.08□□□□□ -0.32
COL11A1-203ENST00000370096 SRRTQ9BXP5 876 aaKnown RBP13.08□□□□□ -0.32
COL11A1-203ENST00000370096 SERPINA10Q9UK55 444 aa13.08□□□□□ -0.32
COL11A1-203ENST00000370096 CGNQ9P2M7 1197 aaKnown RBP13.07□□□□□ -0.32
COL11A1-203ENST00000370096 TXLNBQ8N3L3 684 aa13.07□□□□□ -0.32
COL11A1-203ENST00000370096 RAI14Q9P0K7 980 aa13.07□□□□□ -0.32
COL11A1-203ENST00000370096 WDR33Q9C0J8 1336 aaKnown RBP13.07□□□□□ -0.32
COL11A1-203ENST00000370096 HIP1O00291 1037 aa13.07□□□□□ -0.32
COL11A1-203ENST00000370096 PUS7Q96PZ0 661 aaKnown RBP13.07□□□□□ -0.32
COL11A1-203ENST00000370096 NUP62CLQ9H1M0 184 aa13.07□□□□□ -0.32
COL11A1-203ENST00000370096 KIF6Q6ZMV9 814 aa13.06□□□□□ -0.32
COL11A1-203ENST00000370096 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
COL11A1-203ENST00000370096 ARHGAP29Q52LW3 1261 aa13.06□□□□□ -0.32
COL11A1-203ENST00000370096 CCDC178Q5BJE1 867 aa13.06□□□□□ -0.32
COL11A1-203ENST00000370096 CCDC158Q5M9N0 1113 aa13.06□□□□□ -0.32
COL11A1-203ENST00000370096 CFAP100Q494V2 611 aa13.06□□□□□ -0.32
COL11A1-203ENST00000370096 NLRP2Q9NX02 1062 aa13.06□□□□□ -0.32
COL11A1-203ENST00000370096 ZHX1Q9UKY1 873 aaPredicted RBP13.06□□□□□ -0.32
COL11A1-203ENST00000370096 ESPNB1AK53 854 aa13.06□□□□□ -0.32
COL11A1-203ENST00000370096 TRIM22Q8IYM9 498 aa13.06□□□□□ -0.32
COL11A1-203ENST00000370096 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
COL11A1-203ENST00000370096 ADAMTS8Q9UP79 889 aa13.06□□□□□ -0.32
COL11A1-203ENST00000370096 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
COL11A1-203ENST00000370096 CCDC30Q5VVM6 783 aa13.05□□□□□ -0.32
COL11A1-203ENST00000370096 UACAQ9BZF9 1416 aa13.05□□□□□ -0.32
COL11A1-203ENST00000370096 RB1CC1Q8TDY2 1594 aa13.05□□□□□ -0.32
COL11A1-203ENST00000370096 CEP57L1Q8IYX8 460 aa13.05□□□□□ -0.32
COL11A1-203ENST00000370096 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
COL11A1-203ENST00000370096 PPP1R1BQ9UD71 204 aaPredicted RBP13.05□□□□□ -0.32
COL11A1-203ENST00000370096 SPDYE4A6NLX3 237 aa13.05□□□□□ -0.32
COL11A1-203ENST00000370096 SOGA3Q5TF21 947 aa13.05□□□□□ -0.32
COL11A1-203ENST00000370096 PPM1FP49593 454 aaPredicted RBP13.04□□□□□ -0.32
COL11A1-203ENST00000370096 DDX11Q96FC9 970 aa13.04□□□□□ -0.32
COL11A1-203ENST00000370096 BCAR3O75815 825 aa13.04□□□□□ -0.32
COL11A1-203ENST00000370096 FKBP4Q02790 459 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL11A1-203ENST00000370096 EXOSC9Q06265 439 aaKnown RBP13.04□□□□□ -0.32
COL11A1-203ENST00000370096 DHX57Q6P158 1386 aaKnown RBP13.04□□□□□ -0.32
COL11A1-203ENST00000370096 GNAI2P04899 355 aa13.04□□□□□ -0.32
COL11A1-203ENST00000370096 RBM5P52756 815 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL11A1-203ENST00000370096 IFFO1Q0D2I5 559 aa13.04□□□□□ -0.32
COL11A1-203ENST00000370096 PDRG1Q9NUG6 133 aa13.04□□□□□ -0.32
COL11A1-203ENST00000370096 ANAPC15P60006 121 aa13.04□□□□□ -0.32
COL11A1-203ENST00000370096 CWC27Q6UX04 472 aaKnown RBP13.04□□□□□ -0.32
COL11A1-203ENST00000370096 FHOD3Q2V2M9 1422 aa13.04□□□□□ -0.32
COL11A1-203ENST00000370096 URI1O94763 535 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-203ENST00000370096 GTF2F1P35269 517 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL11A1-203ENST00000370096 PSMD1Q99460 953 aa13.03□□□□□ -0.32
COL11A1-203ENST00000370096 PTPN14Q15678 1187 aa13.03□□□□□ -0.32
COL11A1-203ENST00000370096 CTNNBL1Q8WYA6 563 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-203ENST00000370096 TSR2Q969E8 191 aaKnown RBP13.03□□□□□ -0.32
COL11A1-203ENST00000370096 JAKMIP1Q96N16 626 aaKnown RBP13.03□□□□□ -0.32
COL11A1-203ENST00000370096 TRMT1Q9NXH9 659 aaKnown RBP13.03□□□□□ -0.32
COL11A1-203ENST00000370096 USP5P45974 858 aa13.03□□□□□ -0.32
COL11A1-203ENST00000370096 DHX8Q14562 1220 aaKnown RBP13.03□□□□□ -0.32
COL11A1-203ENST00000370096 ANKRD1Q15327 319 aa13.03□□□□□ -0.32
COL11A1-203ENST00000370096 NOL7Q9UMY1 257 aaKnown RBP13.03□□□□□ -0.32
COL11A1-203ENST00000370096 ZNF397Q8NF99 534 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-203ENST00000370096 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL11A1-203ENST00000370096 GNAI3P08754 354 aa13.02□□□□□ -0.32
COL11A1-203ENST00000370096 KLHL10Q6JEL2 608 aa13.02□□□□□ -0.32
COL11A1-203ENST00000370096 SMTNL1A8MU46 457 aa13.02□□□□□ -0.32
COL11A1-203ENST00000370096 ZNF76P36508 570 aa13.02□□□□□ -0.32
COL11A1-203ENST00000370096 XPCQ01831 940 aaPredicted RBP13.02□□□□□ -0.32
COL11A1-203ENST00000370096 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.33
COL11A1-203ENST00000370096 ZNF526Q8TF50 670 aaPredicted RBP13.01□□□□□ -0.33
COL11A1-203ENST00000370096 STAMBPO95630 424 aa13.01□□□□□ -0.33
COL11A1-203ENST00000370096 MYL6BP14649 208 aa13.01□□□□□ -0.33
COL11A1-203ENST00000370096 TTC16Q8NEE8 873 aa13.01□□□□□ -0.33
COL11A1-203ENST00000370096 GSTTP1A0A1W2PQM5 241 aa13.01□□□□□ -0.33
COL11A1-203ENST00000370096 AKNAQ7Z591 1439 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 CCDC57Q2TAC2 916 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 CHMP4BP1P59074 171 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 SPA17Q15506 151 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 ERC1Q8IUD2 1116 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 TWISTNBQ3B726 338 aaPredicted RBP13□□□□□ -0.33
COL11A1-203ENST00000370096 SLC4A2P04920 1241 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 MTHFSP49914 203 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 KIF4BQ2VIQ3 1234 aa13□□□□□ -0.33
COL11A1-203ENST00000370096 GCC1Q96CN9 775 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms