RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 PLSCR1O15162 318 aa22.44■■□□□ 1.18
SSR4-204ENST00000370087 CENPJQ9HC77 1338 aaPredicted RBP22.44■■□□□ 1.18
SSR4-204ENST00000370087 DDB1Q16531 1140 aa22.43■■□□□ 1.18
SSR4-204ENST00000370087 PROM2Q8N271 834 aa22.43■■□□□ 1.18
SSR4-204ENST00000370087 AXIN2Q9Y2T1 843 aa22.43■■□□□ 1.18
SSR4-204ENST00000370087 BRD4O60885 1362 aaPredicted RBP22.42■■□□□ 1.18
SSR4-204ENST00000370087 NLRP6P59044 892 aa22.42■■□□□ 1.18
SSR4-204ENST00000370087 MARCH10Q8NA82 808 aaPredicted RBP22.42■■□□□ 1.18
SSR4-204ENST00000370087 CPSF1Q10570 1443 aaKnown RBP22.41■■□□□ 1.18
SSR4-204ENST00000370087 TOM1L2Q6ZVM7 507 aa22.41■■□□□ 1.18
SSR4-204ENST00000370087 BCL11BQ9C0K0 894 aaPredicted RBP22.41■■□□□ 1.18
SSR4-204ENST00000370087 CABP1Q9NZU7 370 aa22.41■■□□□ 1.18
SSR4-204ENST00000370087 C11orf95C9JLR9 678 aaPredicted RBP22.4■■□□□ 1.18
SSR4-204ENST00000370087 ZBTB7AO95365 584 aa22.4■■□□□ 1.18
SSR4-204ENST00000370087 WDR17Q8IZU2 1322 aa22.39■■□□□ 1.18
SSR4-204ENST00000370087 BCL9O00512 1426 aa22.39■■□□□ 1.17
SSR4-204ENST00000370087 PTGER2P43116 358 aa22.38■■□□□ 1.17
SSR4-204ENST00000370087 TRPM1Q7Z4N2 1603 aa22.38■■□□□ 1.17
SSR4-204ENST00000370087 NFAT5O94916 1531 aa22.37■■□□□ 1.17
SSR4-204ENST00000370087 NHSQ6T4R5 1651 aa22.37■■□□□ 1.17
SSR4-204ENST00000370087 PAPPAQ13219 1627 aa22.35■■□□□ 1.17
SSR4-204ENST00000370087 DCAF8L1A6NGE4 600 aa22.34■■□□□ 1.17
SSR4-204ENST00000370087 ATF5Q9Y2D1 282 aaPredicted RBP22.34■■□□□ 1.17
SSR4-204ENST00000370087 ARHGEF25Q86VW2 580 aa22.33■■□□□ 1.17
SSR4-204ENST00000370087 SOX12O15370 315 aa22.32■■□□□ 1.16
SSR4-204ENST00000370087 TXNRD1Q16881 649 aa22.32■■□□□ 1.16
SSR4-204ENST00000370087 TNS2Q63HR2 1409 aa22.31■■□□□ 1.16
SSR4-204ENST00000370087 MON2Q7Z3U7 1717 aa22.31■■□□□ 1.16
SSR4-204ENST00000370087 TTC21BQ7Z4L5 1316 aa22.31■■□□□ 1.16
SSR4-204ENST00000370087 CARD10Q9BWT7 1032 aa22.3■■□□□ 1.16
SSR4-204ENST00000370087 CHD4Q14839 1912 aa22.29■■□□□ 1.16
SSR4-204ENST00000370087 BTAF1O14981 1849 aa22.29■■□□□ 1.16
SSR4-204ENST00000370087 CDCA7Q9BWT1 371 aaPredicted RBP22.29■■□□□ 1.16
SSR4-204ENST00000370087 FHDC1Q9C0D6 1143 aaPredicted RBP22.29■■□□□ 1.16
SSR4-204ENST00000370087 ABCC6O95255 1503 aa22.29■■□□□ 1.16
SSR4-204ENST00000370087 LTN1O94822 1766 aa22.28■■□□□ 1.16
SSR4-204ENST00000370087 USP54Q70EL1 1684 aa22.28■■□□□ 1.16
SSR4-204ENST00000370087 SLC15A2Q16348 729 aa22.28■■□□□ 1.16
SSR4-204ENST00000370087 ZNF784Q8NCA9 323 aaPredicted RBP22.28■■□□□ 1.16
SSR4-204ENST00000370087 SGIP1Q9BQI5 828 aa22.28■■□□□ 1.16
SSR4-204ENST00000370087 STK32BQ9NY57 414 aa22.28■■□□□ 1.16
SSR4-204ENST00000370087 CSB-PGBD3P0DP91 1061 aa22.27■■□□□ 1.16
SSR4-204ENST00000370087 SYT17Q9BSW7 474 aa22.26■■□□□ 1.15
SSR4-204ENST00000370087 EVC2Q86UK5 1308 aa22.26■■□□□ 1.15
SSR4-204ENST00000370087 KCNH5Q8NCM2 988 aa22.24■■□□□ 1.15
SSR4-204ENST00000370087 CCDC7Q96M83 1385 aa22.24■■□□□ 1.15
SSR4-204ENST00000370087 EXOC5O00471 708 aa22.23■■□□□ 1.15
SSR4-204ENST00000370087 ACSBG1Q96GR2 724 aa22.23■■□□□ 1.15
SSR4-204ENST00000370087 MTFR1LQ9H019 292 aa22.23■■□□□ 1.15
SSR4-204ENST00000370087 TTC21AQ8NDW8 1320 aa22.22■■□□□ 1.15
SSR4-204ENST00000370087 TUBGCP6Q96RT7 1819 aa22.22■■□□□ 1.15
SSR4-204ENST00000370087 L3MBTL2Q969R5 705 aa22.21■■□□□ 1.15
SSR4-204ENST00000370087 KTN1Q86UP2 1357 aaKnown RBP22.2■■□□□ 1.14
SSR4-204ENST00000370087 QSER1Q2KHR3 1735 aa22.2■■□□□ 1.14
SSR4-204ENST00000370087 ZNF827Q17R98 1081 aa22.19■■□□□ 1.14
SSR4-204ENST00000370087 ZNF692Q9BU19 519 aaPredicted RBP22.19■■□□□ 1.14
SSR4-204ENST00000370087 COL24A1Q17RW2 1714 aa22.19■■□□□ 1.14
SSR4-204ENST00000370087 CD163L1Q9NR16 1453 aa22.18■■□□□ 1.14
SSR4-204ENST00000370087 GOLGB1Q14789 3259 aaKnown RBP22.17■■□□□ 1.14
SSR4-204ENST00000370087 ERBB3P21860 1342 aa22.17■■□□□ 1.14
SSR4-204ENST00000370087 ARXQ96QS3 562 aa22.16■■□□□ 1.14
SSR4-204ENST00000370087 USP31Q70CQ4 1352 aa22.15■■□□□ 1.14
SSR4-204ENST00000370087 MAP3K5Q99683 1374 aa22.15■■□□□ 1.14
SSR4-204ENST00000370087 LRRC4BQ9NT99 713 aa22.15■■□□□ 1.14
SSR4-204ENST00000370087 ROCK2O75116 1388 aaKnown RBP22.14■■□□□ 1.14
SSR4-204ENST00000370087 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.14■■□□□ 1.13
SSR4-204ENST00000370087 SBNO2Q9Y2G9 1366 aa22.13■■□□□ 1.13
SSR4-204ENST00000370087 KAT6BQ8WYB5 2073 aa22.13■■□□□ 1.13
SSR4-204ENST00000370087 NME9Q86XW9 330 aa22.13■■□□□ 1.13
SSR4-204ENST00000370087 NLRP2Q9NX02 1062 aa22.13■■□□□ 1.13
SSR4-204ENST00000370087 DOT1LQ8TEK3 1739 aa22.12■■□□□ 1.13
SSR4-204ENST00000370087 SHANK3Q9BYB0 1731 aa22.12■■□□□ 1.13
SSR4-204ENST00000370087 IL2RBP14784 551 aa22.11■■□□□ 1.13
SSR4-204ENST00000370087 SIN3AQ96ST3 1273 aa22.11■■□□□ 1.13
SSR4-204ENST00000370087 SENP3-EIF4A1A0A087X0R7 540 aa22.1■■□□□ 1.13
SSR4-204ENST00000370087 LY75O60449 1722 aa22.09■■□□□ 1.13
SSR4-204ENST00000370087 C1QTNF8P60827 252 aa22.09■■□□□ 1.13
SSR4-204ENST00000370087 ANKRD24Q8TF21 1146 aa22.09■■□□□ 1.13
SSR4-204ENST00000370087 FAM208AQ9UK61 1670 aaKnown RBP22.09■■□□□ 1.13
SSR4-204ENST00000370087 RGPD2P0DJD1 1756 aa22.09■■□□□ 1.13
SSR4-204ENST00000370087 AKT1S1Q96B36 256 aa22.08■■□□□ 1.13
SSR4-204ENST00000370087 PNPLA7Q6ZV29 1317 aa22.06■■□□□ 1.12
SSR4-204ENST00000370087 KCNQ4P56696 695 aa22.05■■□□□ 1.12
SSR4-204ENST00000370087 NSD2O96028 1365 aa22.03■■□□□ 1.12
SSR4-204ENST00000370087 GPR162Q16538 588 aa22.03■■□□□ 1.12
SSR4-204ENST00000370087 KLHL34Q8N239 644 aa22.03■■□□□ 1.12
SSR4-204ENST00000370087 EDC4Q6P2E9 1401 aaKnown RBP22.03■■□□□ 1.12
SSR4-204ENST00000370087 NLGN2Q8NFZ4 835 aa22.02■■□□□ 1.12
SSR4-204ENST00000370087 A0A1W2PP64 1363 aa22.01■■□□□ 1.11
SSR4-204ENST00000370087 DDX54Q8TDD1 881 aaKnown RBP22.01■■□□□ 1.11
SSR4-204ENST00000370087 NEUROD1Q13562 356 aa22■■□□□ 1.11
SSR4-204ENST00000370087 SLC12A5Q9H2X9 1139 aa22■■□□□ 1.11
SSR4-204ENST00000370087 TMC1Q8TDI8 760 aa21.99■■□□□ 1.11
SSR4-204ENST00000370087 MEGF6O75095 1541 aa21.98■■□□□ 1.11
SSR4-204ENST00000370087 SLC27A3Q5K4L6 730 aa21.98■■□□□ 1.11
SSR4-204ENST00000370087 PELP1Q8IZL8 1130 aaKnown RBP21.98■■□□□ 1.11
SSR4-204ENST00000370087 SLC16A10Q8TF71 515 aa21.98■■□□□ 1.11
SSR4-204ENST00000370087 LTV1Q96GA3 475 aaPredicted RBP21.98■■□□□ 1.11
SSR4-204ENST00000370087 CEP350Q5VT06 3117 aa21.97■■□□□ 1.11
SSR4-204ENST00000370087 ANKRD36BQ8N2N9 1353 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms