RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 NRAPQ86VF7 1730 aa18.74■□□□□ 0.59
SSR4-202ENST00000370085 RTL1A6NKG5 1358 aa18.73■□□□□ 0.59
SSR4-202ENST00000370085 KIF24Q5T7B8 1368 aa18.73■□□□□ 0.59
SSR4-202ENST00000370085 NPC1L1Q9UHC9 1359 aa18.73■□□□□ 0.59
SSR4-202ENST00000370085 ZNF316A6NFI3 1004 aaPredicted RBP18.73■□□□□ 0.59
SSR4-202ENST00000370085 AMER1Q5JTC6 1135 aaPredicted RBP18.73■□□□□ 0.59
SSR4-202ENST00000370085 GJD4Q96KN9 370 aaPredicted RBP18.73■□□□□ 0.59
SSR4-202ENST00000370085 BLMP54132 1417 aaPredicted RBP18.73■□□□□ 0.59
SSR4-202ENST00000370085 CAMTA1Q9Y6Y1 1673 aa18.73■□□□□ 0.59
SSR4-202ENST00000370085 CSB-PGBD3P0DP91 1061 aa18.72■□□□□ 0.59
SSR4-202ENST00000370085 IP6K1Q92551 441 aa18.72■□□□□ 0.59
SSR4-202ENST00000370085 MAP3K19Q56UN5 1328 aa18.72■□□□□ 0.59
SSR4-202ENST00000370085 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
SSR4-202ENST00000370085 COL18A1P39060 1754 aa18.71■□□□□ 0.59
SSR4-202ENST00000370085 TNNT2P45379 298 aaPredicted RBP18.71■□□□□ 0.59
SSR4-202ENST00000370085 MAP2P11137 1827 aaKnown RBP18.7■□□□□ 0.58
SSR4-202ENST00000370085 DDX10Q13206 875 aaKnown RBP18.7■□□□□ 0.58
SSR4-202ENST00000370085 RRS1Q15050 365 aaKnown RBP18.7■□□□□ 0.58
SSR4-202ENST00000370085 CC2D1BQ5T0F9 858 aaKnown RBP18.7■□□□□ 0.58
SSR4-202ENST00000370085 FLT4P35916 1363 aa18.69■□□□□ 0.58
SSR4-202ENST00000370085 SMG6Q86US8 1419 aaKnown RBP18.69■□□□□ 0.58
SSR4-202ENST00000370085 RGPD5Q99666 1765 aa18.69■□□□□ 0.58
SSR4-202ENST00000370085 TOM1L2Q6ZVM7 507 aa18.69■□□□□ 0.58
SSR4-202ENST00000370085 AXIN2Q9Y2T1 843 aa18.69■□□□□ 0.58
SSR4-202ENST00000370085 WDR17Q8IZU2 1322 aa18.69■□□□□ 0.58
SSR4-202ENST00000370085 CRB1P82279 1406 aa18.68■□□□□ 0.58
SSR4-202ENST00000370085 PPM1GO15355 546 aaPredicted RBP18.68■□□□□ 0.58
SSR4-202ENST00000370085 HOXC9P31274 260 aa18.68■□□□□ 0.58
SSR4-202ENST00000370085 CDK12Q9NYV4 1490 aaPredicted RBP18.68■□□□□ 0.58
SSR4-202ENST00000370085 SPATA31A5Q5VU36 1347 aa18.68■□□□□ 0.58
SSR4-202ENST00000370085 SPATA31A7Q8IWB4 1347 aa18.68■□□□□ 0.58
SSR4-202ENST00000370085 LARP1Q6PKG0 1096 aaKnown RBP18.67■□□□□ 0.58
SSR4-202ENST00000370085 THRAP3Q9Y2W1 955 aaKnown RBP18.67■□□□□ 0.58
SSR4-202ENST00000370085 ERBB3P21860 1342 aa18.67■□□□□ 0.58
SSR4-202ENST00000370085 FBLN1P23142 703 aa18.66■□□□□ 0.58
SSR4-202ENST00000370085 CNGB1Q14028 1251 aaPredicted RBP18.66■□□□□ 0.58
SSR4-202ENST00000370085 ANKRD24Q8TF21 1146 aa18.66■□□□□ 0.58
SSR4-202ENST00000370085 SPATA31A1Q5TZJ5 1347 aa18.66■□□□□ 0.58
SSR4-202ENST00000370085 FAM208AQ9UK61 1670 aaKnown RBP18.66■□□□□ 0.58
SSR4-202ENST00000370085 A0A0G2JS52 829 aa18.65■□□□□ 0.58
SSR4-202ENST00000370085 MYT1Q01538 1121 aa18.65■□□□□ 0.58
SSR4-202ENST00000370085 TCP11L2Q8N4U5 519 aa18.65■□□□□ 0.58
SSR4-202ENST00000370085 USP35Q9P2H5 1018 aa18.65■□□□□ 0.58
SSR4-202ENST00000370085 POLKQ9UBT6 870 aa18.65■□□□□ 0.58
SSR4-202ENST00000370085 EMILIN1Q9Y6C2 1016 aa18.65■□□□□ 0.58
SSR4-202ENST00000370085 NLRP2Q9NX02 1062 aa18.64■□□□□ 0.57
SSR4-202ENST00000370085 INSRP06213 1382 aa18.64■□□□□ 0.57
SSR4-202ENST00000370085 GLI3P10071 1580 aa18.64■□□□□ 0.57
SSR4-202ENST00000370085 LTV1Q96GA3 475 aaPredicted RBP18.63■□□□□ 0.57
SSR4-202ENST00000370085 CARD10Q9BWT7 1032 aa18.63■□□□□ 0.57
SSR4-202ENST00000370085 FAM98CQ17RN3 349 aaKnown RBP18.62■□□□□ 0.57
SSR4-202ENST00000370085 BARGINQ6ZT62 677 aa18.62■□□□□ 0.57
SSR4-202ENST00000370085 HSP90AB2PQ58FF8 381 aa18.61■□□□□ 0.57
SSR4-202ENST00000370085 CDCA7Q9BWT1 371 aaPredicted RBP18.61■□□□□ 0.57
SSR4-202ENST00000370085 ONECUT3O60422 494 aaPredicted RBP18.6■□□□□ 0.57
SSR4-202ENST00000370085 PEAK1Q9H792 1746 aa18.6■□□□□ 0.57
SSR4-202ENST00000370085 SEPT12Q8IYM1 358 aa18.59■□□□□ 0.57
SSR4-202ENST00000370085 RGS12O14924 1447 aa18.58■□□□□ 0.57
SSR4-202ENST00000370085 MTHFSP49914 203 aa18.57■□□□□ 0.56
SSR4-202ENST00000370085 RALBP1Q15311 655 aa18.57■□□□□ 0.56
SSR4-202ENST00000370085 ILDR2Q71H61 639 aa18.57■□□□□ 0.56
SSR4-202ENST00000370085 CFAP53Q96M91 514 aa18.57■□□□□ 0.56
SSR4-202ENST00000370085 IL2RBP14784 551 aa18.54■□□□□ 0.56
SSR4-202ENST00000370085 PDE3BQ13370 1112 aa18.54■□□□□ 0.56
SSR4-202ENST00000370085 PARD3Q8TEW0 1356 aa18.54■□□□□ 0.56
SSR4-202ENST00000370085 THSD7AQ9UPZ6 1657 aa18.54■□□□□ 0.56
SSR4-202ENST00000370085 WNK3Q9BYP7 1800 aa18.53■□□□□ 0.56
SSR4-202ENST00000370085 PARP4Q9UKK3 1724 aaKnown RBP18.52■□□□□ 0.56
SSR4-202ENST00000370085 PPP2R1AP30153 589 aa18.52■□□□□ 0.56
SSR4-202ENST00000370085 EIF4A2Q14240 407 aaKnown RBP18.52■□□□□ 0.56
SSR4-202ENST00000370085 DDB1Q16531 1140 aa18.52■□□□□ 0.56
SSR4-202ENST00000370085 NBPF6Q5VWK0 638 aa18.52■□□□□ 0.56
SSR4-202ENST00000370085 KRT27Q7Z3Y8 459 aa18.52■□□□□ 0.56
SSR4-202ENST00000370085 RAPGEF4Q8WZA2 1011 aa18.52■□□□□ 0.56
SSR4-202ENST00000370085 NBPF4Q96M43 638 aa18.52■□□□□ 0.56
SSR4-202ENST00000370085 RGPD2P0DJD1 1756 aa18.51■□□□□ 0.55
SSR4-202ENST00000370085 EXOC5O00471 708 aa18.51■□□□□ 0.55
SSR4-202ENST00000370085 DIAPH1O60610 1272 aaKnown RBP18.5■□□□□ 0.55
SSR4-202ENST00000370085 BRWD3Q6RI45 1802 aa18.5■□□□□ 0.55
SSR4-202ENST00000370085 TATP17735 454 aaPredicted RBP18.49■□□□□ 0.55
SSR4-202ENST00000370085 NUDCQ9Y266 331 aa18.49■□□□□ 0.55
SSR4-202ENST00000370085 DISP2A7MBM2 1401 aa18.49■□□□□ 0.55
SSR4-202ENST00000370085 EYA1Q99502 592 aa18.48■□□□□ 0.55
SSR4-202ENST00000370085 USHBP1Q8N6Y0 703 aa18.47■□□□□ 0.55
SSR4-202ENST00000370085 MYBBP1AQ9BQG0 1328 aaKnown RBP18.47■□□□□ 0.55
SSR4-202ENST00000370085 LRRC37A3O60309 1634 aa18.46■□□□□ 0.55
SSR4-202ENST00000370085 ANP32CO43423 234 aa18.46■□□□□ 0.55
SSR4-202ENST00000370085 IL13P35225 146 aa18.46■□□□□ 0.55
SSR4-202ENST00000370085 TNS2Q63HR2 1409 aa18.46■□□□□ 0.55
SSR4-202ENST00000370085 IGSF1Q8N6C5 1336 aa18.46■□□□□ 0.55
SSR4-202ENST00000370085 PRKRIP1Q9H875 184 aaPredicted RBP18.45■□□□□ 0.54
SSR4-202ENST00000370085 PLEKHG2Q9H7P9 1386 aa18.44■□□□□ 0.54
SSR4-202ENST00000370085 NCAPD2Q15021 1401 aa18.44■□□□□ 0.54
SSR4-202ENST00000370085 FAM196AQ6ZSG2 479 aa18.44■□□□□ 0.54
SSR4-202ENST00000370085 ZCRB1Q8TBF4 217 aaKnown RBP18.44■□□□□ 0.54
SSR4-202ENST00000370085 OVOS2A0A0G2JMS6 1433 aa18.43■□□□□ 0.54
SSR4-202ENST00000370085 U2SURPO15042 1029 aaKnown RBP18.43■□□□□ 0.54
SSR4-202ENST00000370085 SOCS7O14512 581 aa18.42■□□□□ 0.54
SSR4-202ENST00000370085 SULT6B1Q6IMI4 303 aa18.42■□□□□ 0.54
SSR4-202ENST00000370085 SPG7Q9UQ90 795 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms