RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 BLMP54132 1417 aaPredicted RBP21.08■□□□□ 0.97
PRPF38B-202ENST00000370022 BCL9LQ86UU0 1499 aa21.08■□□□□ 0.97
PRPF38B-202ENST00000370022 IP6K1Q92551 441 aa21.08■□□□□ 0.97
PRPF38B-202ENST00000370022 POLKQ9UBT6 870 aa21.08■□□□□ 0.97
PRPF38B-202ENST00000370022 COL18A1P39060 1754 aa21.08■□□□□ 0.96
PRPF38B-202ENST00000370022 CAMTA1Q9Y6Y1 1673 aa21.07■□□□□ 0.96
PRPF38B-202ENST00000370022 FLT4P35916 1363 aa21.07■□□□□ 0.96
PRPF38B-202ENST00000370022 SMG6Q86US8 1419 aaKnown RBP21.07■□□□□ 0.96
PRPF38B-202ENST00000370022 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.07■□□□□ 0.96
PRPF38B-202ENST00000370022 CNGB1Q14028 1251 aaPredicted RBP21.06■□□□□ 0.96
PRPF38B-202ENST00000370022 PARD3Q8TEW0 1356 aa21.06■□□□□ 0.96
PRPF38B-202ENST00000370022 HOXC9P31274 260 aa21.06■□□□□ 0.96
PRPF38B-202ENST00000370022 RALBP1Q15311 655 aa21.06■□□□□ 0.96
PRPF38B-202ENST00000370022 AXIN2Q9Y2T1 843 aa21.06■□□□□ 0.96
PRPF38B-202ENST00000370022 EMILIN1Q9Y6C2 1016 aa21.06■□□□□ 0.96
PRPF38B-202ENST00000370022 COL5A2P05997 1499 aaPredicted RBP21.05■□□□□ 0.96
PRPF38B-202ENST00000370022 EVA1CP58658 441 aa21.05■□□□□ 0.96
PRPF38B-202ENST00000370022 NRAPQ86VF7 1730 aa21.04■□□□□ 0.96
PRPF38B-202ENST00000370022 TRPC5Q9UL62 973 aaPredicted RBP21.04■□□□□ 0.96
PRPF38B-202ENST00000370022 INSRP06213 1382 aa21.03■□□□□ 0.96
PRPF38B-202ENST00000370022 MAP2P11137 1827 aaKnown RBP21.03■□□□□ 0.96
PRPF38B-202ENST00000370022 PPM1GO15355 546 aaPredicted RBP21.02■□□□□ 0.96
PRPF38B-202ENST00000370022 VPS72Q15906 364 aa21.02■□□□□ 0.96
PRPF38B-202ENST00000370022 RGS17Q9UGC6 210 aaPredicted RBP21.02■□□□□ 0.96
PRPF38B-202ENST00000370022 ERBB3P21860 1342 aa21.02■□□□□ 0.95
PRPF38B-202ENST00000370022 STRN4Q9NRL3 753 aa21.02■□□□□ 0.95
PRPF38B-202ENST00000370022 PEAK1Q9H792 1746 aa21.01■□□□□ 0.95
PRPF38B-202ENST00000370022 CDK12Q9NYV4 1490 aaPredicted RBP21.01■□□□□ 0.95
PRPF38B-202ENST00000370022 ATRNO75882 1429 aa21.01■□□□□ 0.95
PRPF38B-202ENST00000370022 WDR17Q8IZU2 1322 aa21.01■□□□□ 0.95
PRPF38B-202ENST00000370022 HSP90AB2PQ58FF8 381 aa21■□□□□ 0.95
PRPF38B-202ENST00000370022 QTRT2Q9H974 415 aaKnown RBP21■□□□□ 0.95
PRPF38B-202ENST00000370022 PPP2R1AP30153 589 aa20.99■□□□□ 0.95
PRPF38B-202ENST00000370022 MTHFSP49914 203 aa20.99■□□□□ 0.95
PRPF38B-202ENST00000370022 ANKRD24Q8TF21 1146 aa20.99■□□□□ 0.95
PRPF38B-202ENST00000370022 CRB1P82279 1406 aa20.98■□□□□ 0.95
PRPF38B-202ENST00000370022 CSB-PGBD3P0DP91 1061 aa20.98■□□□□ 0.95
PRPF38B-202ENST00000370022 PRKRIP1Q9H875 184 aaPredicted RBP20.98■□□□□ 0.95
PRPF38B-202ENST00000370022 LARP1Q6PKG0 1096 aaKnown RBP20.97■□□□□ 0.95
PRPF38B-202ENST00000370022 RGPD5Q99666 1765 aa20.97■□□□□ 0.95
PRPF38B-202ENST00000370022 TOM1L2Q6ZVM7 507 aa20.97■□□□□ 0.95
PRPF38B-202ENST00000370022 GJD4Q96KN9 370 aaPredicted RBP20.97■□□□□ 0.95
PRPF38B-202ENST00000370022 SPATA31A5Q5VU36 1347 aa20.96■□□□□ 0.95
PRPF38B-202ENST00000370022 SPATA31A7Q8IWB4 1347 aa20.96■□□□□ 0.95
PRPF38B-202ENST00000370022 CCDC9Q9Y3X0 531 aaKnown RBP20.96■□□□□ 0.95
PRPF38B-202ENST00000370022 FAM208AQ9UK61 1670 aaKnown RBP20.96■□□□□ 0.95
PRPF38B-202ENST00000370022 MYBBP1AQ9BQG0 1328 aaKnown RBP20.95■□□□□ 0.95
PRPF38B-202ENST00000370022 ANP32CO43423 234 aa20.95■□□□□ 0.94
PRPF38B-202ENST00000370022 RBM6P78332 1123 aaKnown RBP20.95■□□□□ 0.94
PRPF38B-202ENST00000370022 SPATA31A1Q5TZJ5 1347 aa20.95■□□□□ 0.94
PRPF38B-202ENST00000370022 LTV1Q96GA3 475 aaPredicted RBP20.94■□□□□ 0.94
PRPF38B-202ENST00000370022 CFAP53Q96M91 514 aa20.94■□□□□ 0.94
PRPF38B-202ENST00000370022 CARD10Q9BWT7 1032 aa20.94■□□□□ 0.94
PRPF38B-202ENST00000370022 THRAP3Q9Y2W1 955 aaKnown RBP20.94■□□□□ 0.94
PRPF38B-202ENST00000370022 RXRBP28702 533 aa20.93■□□□□ 0.94
PRPF38B-202ENST00000370022 POTEAQ6S8J7 498 aa20.93■□□□□ 0.94
PRPF38B-202ENST00000370022 NLRP2Q9NX02 1062 aa20.93■□□□□ 0.94
PRPF38B-202ENST00000370022 EIF4A2Q14240 407 aaKnown RBP20.92■□□□□ 0.94
PRPF38B-202ENST00000370022 TCP11L2Q8N4U5 519 aa20.92■□□□□ 0.94
PRPF38B-202ENST00000370022 BARGINQ6ZT62 677 aa20.9■□□□□ 0.94
PRPF38B-202ENST00000370022 GLI3P10071 1580 aa20.9■□□□□ 0.94
PRPF38B-202ENST00000370022 USP35Q9P2H5 1018 aa20.89■□□□□ 0.94
PRPF38B-202ENST00000370022 DIAPH1O60610 1272 aaKnown RBP20.89■□□□□ 0.93
PRPF38B-202ENST00000370022 COL3A1P02461 1466 aaPredicted RBP20.88■□□□□ 0.93
PRPF38B-202ENST00000370022 ONECUT3O60422 494 aaPredicted RBP20.88■□□□□ 0.93
PRPF38B-202ENST00000370022 IL13P35225 146 aa20.88■□□□□ 0.93
PRPF38B-202ENST00000370022 NBPF6Q5VWK0 638 aa20.88■□□□□ 0.93
PRPF38B-202ENST00000370022 NBPF4Q96M43 638 aa20.88■□□□□ 0.93
PRPF38B-202ENST00000370022 CDCA7Q9BWT1 371 aaPredicted RBP20.87■□□□□ 0.93
PRPF38B-202ENST00000370022 EYA1Q99502 592 aa20.86■□□□□ 0.93
PRPF38B-202ENST00000370022 NCAPD2Q15021 1401 aa20.86■□□□□ 0.93
PRPF38B-202ENST00000370022 DIEXFQ68CQ4 756 aaKnown RBP20.85■□□□□ 0.93
PRPF38B-202ENST00000370022 IGSF1Q8N6C5 1336 aa20.85■□□□□ 0.93
PRPF38B-202ENST00000370022 FAM98CQ17RN3 349 aaKnown RBP20.85■□□□□ 0.93
PRPF38B-202ENST00000370022 NUDCQ9Y266 331 aa20.85■□□□□ 0.93
PRPF38B-202ENST00000370022 DISP2A7MBM2 1401 aa20.82■□□□□ 0.92
PRPF38B-202ENST00000370022 IL2RBP14784 551 aa20.82■□□□□ 0.92
PRPF38B-202ENST00000370022 RGPD2P0DJD1 1756 aa20.82■□□□□ 0.92
PRPF38B-202ENST00000370022 RGPD1P0DJD0 1748 aa20.82■□□□□ 0.92
PRPF38B-202ENST00000370022 THSD7AQ9UPZ6 1657 aa20.81■□□□□ 0.92
PRPF38B-202ENST00000370022 PLEKHG2Q9H7P9 1386 aa20.81■□□□□ 0.92
PRPF38B-202ENST00000370022 SEPT12Q8IYM1 358 aa20.8■□□□□ 0.92
PRPF38B-202ENST00000370022 USHBP1Q8N6Y0 703 aa20.8■□□□□ 0.92
PRPF38B-202ENST00000370022 RAPGEF4Q8WZA2 1011 aa20.8■□□□□ 0.92
PRPF38B-202ENST00000370022 WNK3Q9BYP7 1800 aa20.8■□□□□ 0.92
PRPF38B-202ENST00000370022 RGS12O14924 1447 aa20.8■□□□□ 0.92
PRPF38B-202ENST00000370022 KDRP35968 1356 aa20.79■□□□□ 0.92
PRPF38B-202ENST00000370022 A0A0G2JS52 829 aa20.79■□□□□ 0.92
PRPF38B-202ENST00000370022 U2SURPO15042 1029 aaKnown RBP20.79■□□□□ 0.92
PRPF38B-202ENST00000370022 MYT1Q01538 1121 aa20.79■□□□□ 0.92
PRPF38B-202ENST00000370022 PARP4Q9UKK3 1724 aaKnown RBP20.78■□□□□ 0.92
PRPF38B-202ENST00000370022 TATP17735 454 aaPredicted RBP20.77■□□□□ 0.92
PRPF38B-202ENST00000370022 SULT6B1Q6IMI4 303 aa20.77■□□□□ 0.92
PRPF38B-202ENST00000370022 DDB1Q16531 1140 aa20.76■□□□□ 0.91
PRPF38B-202ENST00000370022 OVOS2A0A0G2JMS6 1433 aa20.76■□□□□ 0.91
PRPF38B-202ENST00000370022 MEGF6O75095 1541 aa20.76■□□□□ 0.91
PRPF38B-202ENST00000370022 EXOC5O00471 708 aa20.75■□□□□ 0.91
PRPF38B-202ENST00000370022 U2AF1L5P0DN76 240 aaPredicted RBP20.75■□□□□ 0.91
PRPF38B-202ENST00000370022 U2AF1Q01081 240 aaKnown RBP eCLIP20.75■□□□□ 0.91
PRPF38B-202ENST00000370022 LRRC37A3O60309 1634 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms