RNA–Protein interactions for RNA: ENST00000369236.5

GFRA1-203, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GFRA1, Length 9,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-203ENST00000369236 USP47Q96K76 1375 aa14.11□□□□□ -0.15
GFRA1-203ENST00000369236 KIF3CO14782 793 aa14.11□□□□□ -0.15
GFRA1-203ENST00000369236 FOSBP53539 338 aa14.11□□□□□ -0.15
GFRA1-203ENST00000369236 NAA15Q9BXJ9 866 aaKnown RBP14.11□□□□□ -0.15
GFRA1-203ENST00000369236 NUP62CLQ9H1M0 184 aa14.11□□□□□ -0.15
GFRA1-203ENST00000369236 CCDC18Q5T9S5 1454 aa14.11□□□□□ -0.15
GFRA1-203ENST00000369236 CETN2P41208 172 aa14.11□□□□□ -0.15
GFRA1-203ENST00000369236 ME1P48163 572 aa14.11□□□□□ -0.15
GFRA1-203ENST00000369236 NUP155O75694 1391 aa14.11□□□□□ -0.15
GFRA1-203ENST00000369236 MAP3K11Q16584 847 aa14.11□□□□□ -0.15
GFRA1-203ENST00000369236 BCL2L13Q9BXK5 485 aa14.11□□□□□ -0.15
GFRA1-203ENST00000369236 MSL1Q68DK7 614 aa14.1□□□□□ -0.15
GFRA1-203ENST00000369236 RSRC1Q96IZ7 334 aaKnown RBP14.1□□□□□ -0.15
GFRA1-203ENST00000369236 GTF2E1P29083 439 aaPredicted RBP14.1□□□□□ -0.15
GFRA1-203ENST00000369236 NSRP1Q9H0G5 558 aaKnown RBP14.1□□□□□ -0.15
GFRA1-203ENST00000369236 GSDMDP57764 484 aa14.1□□□□□ -0.15
GFRA1-203ENST00000369236 DDX12PQ92771 950 aa14.1□□□□□ -0.15
GFRA1-203ENST00000369236 TUBB4BP68371 445 aa14.1□□□□□ -0.15
GFRA1-203ENST00000369236 LMAN1P49257 510 aa14.09□□□□□ -0.15
GFRA1-203ENST00000369236 MCM4P33991 863 aa14.09□□□□□ -0.15
GFRA1-203ENST00000369236 NEK4P51957 841 aa14.09□□□□□ -0.15
GFRA1-203ENST00000369236 SPA17Q15506 151 aa14.09□□□□□ -0.15
GFRA1-203ENST00000369236 CEP83Q9Y592 693 aa14.09□□□□□ -0.15
GFRA1-203ENST00000369236 AMPHP49418 695 aa14.09□□□□□ -0.15
GFRA1-203ENST00000369236 LNPKQ9C0E8 428 aa14.08□□□□□ -0.15
GFRA1-203ENST00000369236 SLC3A2P08195 630 aaKnown RBP14.08□□□□□ -0.15
GFRA1-203ENST00000369236 NAP1L3Q99457 506 aaPredicted RBP14.08□□□□□ -0.15
GFRA1-203ENST00000369236 C1orf141Q5JVX7 400 aa14.08□□□□□ -0.16
GFRA1-203ENST00000369236 CNTLNQ9NXG0 1405 aa14.08□□□□□ -0.16
GFRA1-203ENST00000369236 LIG1P18858 919 aa14.08□□□□□ -0.16
GFRA1-203ENST00000369236 CCDC144AA2RUR9 1427 aa14.08□□□□□ -0.16
GFRA1-203ENST00000369236 CCDC183Q5T5S1 534 aa14.08□□□□□ -0.16
GFRA1-203ENST00000369236 CEP112Q8N8E3 955 aa14.08□□□□□ -0.16
GFRA1-203ENST00000369236 CDKL5O76039 1030 aa14.08□□□□□ -0.16
GFRA1-203ENST00000369236 KRT18P05783 430 aaKnown RBP14.07□□□□□ -0.16
GFRA1-203ENST00000369236 CCDC113Q9H0I3 377 aa14.07□□□□□ -0.16
GFRA1-203ENST00000369236 VPS36Q86VN1 386 aa14.07□□□□□ -0.16
GFRA1-203ENST00000369236 SPATA32Q96LK8 384 aa14.07□□□□□ -0.16
GFRA1-203ENST00000369236 RRP7AQ9Y3A4 280 aaKnown RBP14.07□□□□□ -0.16
GFRA1-203ENST00000369236 NOL3O60936 208 aaKnown RBP14.06□□□□□ -0.16
GFRA1-203ENST00000369236 ZFYP08048 801 aaPredicted RBP14.06□□□□□ -0.16
GFRA1-203ENST00000369236 CCDC9Q9Y3X0 531 aaKnown RBP14.06□□□□□ -0.16
GFRA1-203ENST00000369236 A0A1B0GUA9 196 aa14.06□□□□□ -0.16
GFRA1-203ENST00000369236 STK26Q9P289 416 aa14.06□□□□□ -0.16
GFRA1-203ENST00000369236 BRD4O60885 1362 aaPredicted RBP14.06□□□□□ -0.16
GFRA1-203ENST00000369236 DNAJC21Q5F1R6 531 aaKnown RBP14.06□□□□□ -0.16
GFRA1-203ENST00000369236 RAD21O60216 631 aa14.06□□□□□ -0.16
GFRA1-203ENST00000369236 BACH2Q9BYV9 841 aa14.06□□□□□ -0.16
GFRA1-203ENST00000369236 CAVIN2O95810 425 aa14.06□□□□□ -0.16
GFRA1-203ENST00000369236 POTEJP0CG39 1038 aa14.06□□□□□ -0.16
GFRA1-203ENST00000369236 GBP6Q6ZN66 633 aa14.06□□□□□ -0.16
GFRA1-203ENST00000369236 TRIM21P19474 475 aaKnown RBP14.06□□□□□ -0.16
GFRA1-203ENST00000369236 GCC1Q96CN9 775 aa14.06□□□□□ -0.16
GFRA1-203ENST00000369236 CYP46A1Q9Y6A2 500 aa14.06□□□□□ -0.16
GFRA1-203ENST00000369236 PAF1Q8N7H5 531 aa14.05□□□□□ -0.16
GFRA1-203ENST00000369236 EHBP1Q8NDI1 1231 aa14.05□□□□□ -0.16
GFRA1-203ENST00000369236 TRIM22Q8IYM9 498 aa14.05□□□□□ -0.16
GFRA1-203ENST00000369236 RUNDC1Q96C34 613 aa14.05□□□□□ -0.16
GFRA1-203ENST00000369236 ALS2CR12Q96Q35 445 aa14.05□□□□□ -0.16
GFRA1-203ENST00000369236 CFAP100Q494V2 611 aa14.04□□□□□ -0.16
GFRA1-203ENST00000369236 TANGO6Q9C0B7 1094 aa14.04□□□□□ -0.16
GFRA1-203ENST00000369236 PRDM2Q13029 1718 aa14.04□□□□□ -0.16
GFRA1-203ENST00000369236 SYCE3A1L190 88 aa14.04□□□□□ -0.16
GFRA1-203ENST00000369236 CCDC94Q9BW85 323 aaPredicted RBP14.04□□□□□ -0.16
GFRA1-203ENST00000369236 SREK1Q8WXA9 508 aaKnown RBP14.04□□□□□ -0.16
GFRA1-203ENST00000369236 CCDC171Q6TFL3 1326 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 CTAGE5O15320 804 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 KIF5BP33176 963 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 PAFAH1B1P43034 410 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 STMN4Q9H169 189 aaPredicted RBP14.03□□□□□ -0.16
GFRA1-203ENST00000369236 SUDS3Q9H7L9 328 aaPredicted RBP14.03□□□□□ -0.16
GFRA1-203ENST00000369236 PPP1R12BO60237 982 aaPredicted RBP14.03□□□□□ -0.16
GFRA1-203ENST00000369236 RNF168Q8IYW5 571 aaPredicted RBP14.03□□□□□ -0.16
GFRA1-203ENST00000369236 EIF5P55010 431 aaKnown RBP14.03□□□□□ -0.16
GFRA1-203ENST00000369236 MIPOL1Q8TD10 442 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 PANK3Q9H999 370 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 HSF2BPO75031 334 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 ANAPC15P60006 121 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 RASSF4Q9H2L5 321 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 ARFGAP3Q9NP61 516 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 CUX1P39880 1505 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 ZWINTO95229 277 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 CCDC6Q16204 474 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 HOOK3Q86VS8 718 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 GOPCQ9HD26 462 aa14.03□□□□□ -0.16
GFRA1-203ENST00000369236 IBSPP21815 317 aaPredicted RBP14.02□□□□□ -0.16
GFRA1-203ENST00000369236 SH3BGRP55822 239 aaPredicted RBP14.02□□□□□ -0.16
GFRA1-203ENST00000369236 CLIP2Q9UDT6 1046 aa14.02□□□□□ -0.16
GFRA1-203ENST00000369236 CEP131Q9UPN4 1083 aa14.02□□□□□ -0.16
GFRA1-203ENST00000369236 TTC5Q8N0Z6 440 aa14.02□□□□□ -0.16
GFRA1-203ENST00000369236 UBE4AQ14139 1066 aa14.02□□□□□ -0.17
GFRA1-203ENST00000369236 GNAI1P63096 354 aa14.02□□□□□ -0.17
GFRA1-203ENST00000369236 SH2D4BQ5SQS7 431 aa14.02□□□□□ -0.17
GFRA1-203ENST00000369236 DNAI2Q9GZS0 605 aa14.02□□□□□ -0.17
GFRA1-203ENST00000369236 CCDC160A6NGH7 325 aa14.02□□□□□ -0.17
GFRA1-203ENST00000369236 USO1O60763 962 aaKnown RBP14.02□□□□□ -0.17
GFRA1-203ENST00000369236 EVC2Q86UK5 1308 aa14.02□□□□□ -0.17
GFRA1-203ENST00000369236 GSTTP1A0A1W2PQM5 241 aa14.02□□□□□ -0.17
GFRA1-203ENST00000369236 TCHPQ9BT92 498 aa14.02□□□□□ -0.17
GFRA1-203ENST00000369236 CCDC50Q8IVM0 306 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms