RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 VTI1AQ96AJ9 217 aa12.61□□□□□ -0.39
SCNM1-202ENST00000368905 NUB1Q9Y5A7 615 aa12.61□□□□□ -0.39
SCNM1-202ENST00000368905 PMM1Q92871 262 aa12.6□□□□□ -0.39
SCNM1-202ENST00000368905 PLSCR2Q9NRY7 297 aa12.6□□□□□ -0.39
SCNM1-202ENST00000368905 CCDC194A0A1B0GVG4 234 aa12.59□□□□□ -0.39
SCNM1-202ENST00000368905 SEMA3EO15041 775 aa12.59□□□□□ -0.39
SCNM1-202ENST00000368905 EPB41L2O43491 1005 aaKnown RBP12.59□□□□□ -0.39
SCNM1-202ENST00000368905 OTUD6BQ8N6M0 293 aa12.59□□□□□ -0.39
SCNM1-202ENST00000368905 SPOCK3Q9BQ16 436 aa12.59□□□□□ -0.39
SCNM1-202ENST00000368905 MADDQ8WXG6 1647 aa12.59□□□□□ -0.39
SCNM1-202ENST00000368905 EIF3AQ14152 1382 aaKnown RBP12.59□□□□□ -0.39
SCNM1-202ENST00000368905 KIAA1210Q9ULL0 1709 aa12.58□□□□□ -0.39
SCNM1-202ENST00000368905 CLTCL1P53675 1640 aa12.58□□□□□ -0.4
SCNM1-202ENST00000368905 EIF3JO75822 258 aaKnown RBP12.58□□□□□ -0.4
SCNM1-202ENST00000368905 PARNO95453 639 aaKnown RBP12.58□□□□□ -0.4
SCNM1-202ENST00000368905 PDE4DQ08499 809 aa12.58□□□□□ -0.4
SCNM1-202ENST00000368905 NLRP13Q86W25 1043 aa12.58□□□□□ -0.4
SCNM1-202ENST00000368905 RBM46Q8TBY0 533 aaKnown RBP12.58□□□□□ -0.4
SCNM1-202ENST00000368905 PNISRQ8TF01 805 aaKnown RBP12.58□□□□□ -0.4
SCNM1-202ENST00000368905 TESK2Q96S53 571 aa12.58□□□□□ -0.4
SCNM1-202ENST00000368905 POGZQ7Z3K3 1410 aa12.58□□□□□ -0.4
SCNM1-202ENST00000368905 RICTORQ6R327 1708 aa12.58□□□□□ -0.4
SCNM1-202ENST00000368905 KIDINS220Q9ULH0 1771 aa12.58□□□□□ -0.4
SCNM1-202ENST00000368905 LMTK2Q8IWU2 1503 aa12.58□□□□□ -0.4
SCNM1-202ENST00000368905 SETDB1Q15047 1291 aa12.57□□□□□ -0.4
SCNM1-202ENST00000368905 GPATCH3Q96I76 525 aa12.57□□□□□ -0.4
SCNM1-202ENST00000368905 SMG6Q86US8 1419 aaKnown RBP12.57□□□□□ -0.4
SCNM1-202ENST00000368905 RHBDL3P58872 404 aa12.57□□□□□ -0.4
SCNM1-202ENST00000368905 MCM6Q14566 821 aa12.57□□□□□ -0.4
SCNM1-202ENST00000368905 EGFL6Q8IUX8 553 aa12.57□□□□□ -0.4
SCNM1-202ENST00000368905 PARD3Q8TEW0 1356 aa12.56□□□□□ -0.4
SCNM1-202ENST00000368905 SCAF11Q99590 1463 aaKnown RBP12.56□□□□□ -0.4
SCNM1-202ENST00000368905 MLH3Q9UHC1 1453 aa12.56□□□□□ -0.4
SCNM1-202ENST00000368905 ZRANB2O95218 330 aaKnown RBP eCLIP12.56□□□□□ -0.4
SCNM1-202ENST00000368905 HDAC1Q13547 482 aaPredicted RBP12.56□□□□□ -0.4
SCNM1-202ENST00000368905 CCDC85AQ96PX6 553 aaPredicted RBP12.56□□□□□ -0.4
SCNM1-202ENST00000368905 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
SCNM1-202ENST00000368905 EFCAB6Q5THR3 1501 aa12.56□□□□□ -0.4
SCNM1-202ENST00000368905 FRMPD1Q5SYB0 1578 aa12.56□□□□□ -0.4
SCNM1-202ENST00000368905 KIF1BO60333 1816 aa12.56□□□□□ -0.4
SCNM1-202ENST00000368905 IQGAP1P46940 1657 aa12.56□□□□□ -0.4
SCNM1-202ENST00000368905 PLEKHG3A1L390 1219 aa12.55□□□□□ -0.4
SCNM1-202ENST00000368905 NBPF9Q3BBW0 867 aa12.55□□□□□ -0.4
SCNM1-202ENST00000368905 MROH1Q8NDA8 1641 aa12.55□□□□□ -0.4
SCNM1-202ENST00000368905 PSEN1P49768 467 aa12.55□□□□□ -0.4
SCNM1-202ENST00000368905 LRPPRCP42704 1394 aaKnown RBP12.55□□□□□ -0.4
SCNM1-202ENST00000368905 MYOM2P54296 1465 aa12.55□□□□□ -0.4
SCNM1-202ENST00000368905 U2SURPO15042 1029 aaKnown RBP12.54□□□□□ -0.4
SCNM1-202ENST00000368905 DHX16O60231 1041 aaKnown RBP12.54□□□□□ -0.4
SCNM1-202ENST00000368905 RAPGEF3O95398 923 aa12.54□□□□□ -0.4
SCNM1-202ENST00000368905 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.54□□□□□ -0.4
SCNM1-202ENST00000368905 INSRP06213 1382 aa12.54□□□□□ -0.4
SCNM1-202ENST00000368905 DISP3Q9P2K9 1392 aa12.54□□□□□ -0.4
SCNM1-202ENST00000368905 HECW2Q9P2P5 1572 aa12.54□□□□□ -0.4
SCNM1-202ENST00000368905 CSPP1Q1MSJ5 1256 aa12.54□□□□□ -0.4
SCNM1-202ENST00000368905 PPP4R2Q9NY27 417 aa12.54□□□□□ -0.4
SCNM1-202ENST00000368905 NUDCQ9Y266 331 aa12.54□□□□□ -0.4
SCNM1-202ENST00000368905 ZMYM4Q5VZL5 1548 aa12.53□□□□□ -0.4
SCNM1-202ENST00000368905 GOLGA6CA6NDK9 693 aa12.53□□□□□ -0.4
SCNM1-202ENST00000368905 GOLGA6BA6NDN3 693 aa12.53□□□□□ -0.4
SCNM1-202ENST00000368905 PER1O15534 1290 aaPredicted RBP12.53□□□□□ -0.4
SCNM1-202ENST00000368905 GOLGA6DP0CG33 693 aa12.53□□□□□ -0.4
SCNM1-202ENST00000368905 GET4Q7L5D6 327 aaPredicted RBP12.53□□□□□ -0.4
SCNM1-202ENST00000368905 POM121Q96HA1 1249 aa12.53□□□□□ -0.4
SCNM1-202ENST00000368905 CARD10Q9BWT7 1032 aa12.53□□□□□ -0.4
SCNM1-202ENST00000368905 JADE2Q9NQC1 790 aa12.53□□□□□ -0.4
SCNM1-202ENST00000368905 GOLGA6AQ9NYA3 693 aa12.53□□□□□ -0.4
SCNM1-202ENST00000368905 FRMD4BQ9Y2L6 1034 aa12.53□□□□□ -0.4
SCNM1-202ENST00000368905 COMMD10Q9Y6G5 202 aa12.53□□□□□ -0.4
SCNM1-202ENST00000368905 SEMA3FQ13275 785 aa12.52□□□□□ -0.4
SCNM1-202ENST00000368905 MKL1Q969V6 931 aa12.52□□□□□ -0.4
SCNM1-202ENST00000368905 ZNF830Q96NB3 372 aaPredicted RBP12.52□□□□□ -0.4
SCNM1-202ENST00000368905 CC2D1BQ5T0F9 858 aaKnown RBP12.52□□□□□ -0.41
SCNM1-202ENST00000368905 ZKSCAN2Q63HK3 967 aa12.52□□□□□ -0.41
SCNM1-202ENST00000368905 TXNDC2Q86VQ3 553 aa12.52□□□□□ -0.41
SCNM1-202ENST00000368905 ARHGEF1Q92888 912 aaKnown RBP12.52□□□□□ -0.41
SCNM1-202ENST00000368905 ZNF500O60304 480 aaPredicted RBP12.51□□□□□ -0.41
SCNM1-202ENST00000368905 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
SCNM1-202ENST00000368905 MSL3Q8N5Y2 521 aaKnown RBP12.51□□□□□ -0.41
SCNM1-202ENST00000368905 PANK3Q9H999 370 aa12.51□□□□□ -0.41
SCNM1-202ENST00000368905 TRIM66O15016 1216 aa12.5□□□□□ -0.41
SCNM1-202ENST00000368905 ZC3H6P61129 1189 aaKnown RBP12.5□□□□□ -0.41
SCNM1-202ENST00000368905 CALD1Q05682 793 aaKnown RBP12.5□□□□□ -0.41
SCNM1-202ENST00000368905 SKIV2LQ15477 1246 aaKnown RBP12.5□□□□□ -0.41
SCNM1-202ENST00000368905 PRDM4Q9UKN5 801 aa12.5□□□□□ -0.41
SCNM1-202ENST00000368905 SBNO2Q9Y2G9 1366 aa12.5□□□□□ -0.41
SCNM1-202ENST00000368905 DPH6Q7L8W6 267 aa12.5□□□□□ -0.41
SCNM1-202ENST00000368905 ARHGEF10LQ9HCE6 1279 aa12.5□□□□□ -0.41
SCNM1-202ENST00000368905 FEZ2Q9UHY8 353 aaPredicted RBP12.5□□□□□ -0.41
SCNM1-202ENST00000368905 SYNMO15061 1565 aa12.49□□□□□ -0.41
SCNM1-202ENST00000368905 PDE3BQ13370 1112 aa12.49□□□□□ -0.41
SCNM1-202ENST00000368905 HELBQ8NG08 1087 aaPredicted RBP12.49□□□□□ -0.41
SCNM1-202ENST00000368905 NOP58Q9Y2X3 529 aaKnown RBP12.49□□□□□ -0.41
SCNM1-202ENST00000368905 KNSTRNQ9Y448 316 aa12.49□□□□□ -0.41
SCNM1-202ENST00000368905 SF3A1Q15459 793 aaKnown RBP12.49□□□□□ -0.41
SCNM1-202ENST00000368905 CREBRFQ8IUR6 639 aa12.49□□□□□ -0.41
SCNM1-202ENST00000368905 KRI1Q8N9T8 703 aaKnown RBP12.49□□□□□ -0.41
SCNM1-202ENST00000368905 GNL3LQ9NVN8 582 aaKnown RBP12.49□□□□□ -0.41
SCNM1-202ENST00000368905 FAN1Q9Y2M0 1017 aa12.49□□□□□ -0.41
SCNM1-202ENST00000368905 RPGRIP1LQ68CZ1 1315 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms